Sequence Description Alias PCC hrr evm.model.tig00000269.87 no hits & (original description: no original description) 0.8420751705976584 15 evm.model.tig00000391.19 no hits & (original description: no original description) 0.8343472512268441 10 evm.model.tig00021760.5 no hits & (original description: no original description) 0.8178044530745635 64 evm.model.tig00000949.17 (at5g41360 : 573.0) Encodes XPB2, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of Xeroderma pigmentosum complementation group B 2 (XPB2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV-B, N-terminal protein myristoylation; EXPRESSED IN: whole plant; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of xeroderma pigmentosum complementation group B 1 (TAIR:AT5G41370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1146.0) & (original description: no original description) 0.8096365847912582 6 evm.model.tig00020592.61 no hits & (original description: no original description) 0.8053097308180005 13 evm.model.tig00020996.33 no hits & (original description: no original description) 0.8031588483483771 6 evm.model.tig00021105.36 no hits & (original description: no original description) 0.8017890090712588 17 evm.model.tig00020610.32 (at3g61240 : 214.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p41380|if4a3_nicpl : 189.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 428.0) & (original description: no original description) 0.7989401441824704 14 evm.model.tig00021521.2 no hits & (original description: no original description) 0.7877298095205085 9 evm.model.tig00021073.23 no hits & (original description: no original description) 0.7832593834066741 19 evm.model.tig00020554.88 (at2g17510 : 140.0) EMBRYO DEFECTIVE 2763 (EMB2763); FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide binding protein, PINc (InterPro:IPR006596), Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: Ribonuclease II/R family protein (TAIR:AT1G77680.1). & (reliability: 280.0) & (original description: no original description) 0.7810141132899661 12 evm.model.tig00000385.3 no hits & (original description: no original description) 0.7809764928201954 47 evm.model.tig00001098.20 no hits & (original description: no original description) 0.7805719903804718 27 evm.model.tig00000254.72 no hits & (original description: no original description) 0.7801911516728998 26 evm.model.tig00021073.27 no hits & (original description: no original description) 0.7785647480200116 52 evm.model.tig00020961.143 no hits & (original description: no original description) 0.7785405478563837 16 evm.model.tig00001127.22 no hits & (original description: no original description) 0.7769612944236086 80 evm.model.tig00020965.40 no hits & (original description: no original description) 0.7639551162084333 42 evm.model.tig00021179.84 (at3g16340 : 211.0) pleiotropic drug resistance 1 (PDR1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), Pleiotropic drug resistance protein PDR (InterPro:IPR005285), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1). & (q7fmw4|pdr15_orysa : 207.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 422.0) & (original description: no original description) 0.7635629801518988 58 evm.model.tig00020563.7 (at5g35410 : 142.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 131.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 284.0) & (original description: no original description) 0.7624398220841123 79 evm.model.tig00021123.25 no hits & (original description: no original description) 0.7608251809971147 30 evm.model.tig00000254.70 no hits & (original description: no original description) 0.759247649012431 92 evm.model.tig00000219.65 no hits & (original description: no original description) 0.7589272997707294 36 evm.model.tig00000381.3 (q08435|pma1_nicpl : 293.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g62670 : 291.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (reliability: 582.0) & (original description: no original description) 0.758513324896713 53 evm.model.tig00020911.66 (at3g56960 : 83.2) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.7485978466231482 89 evm.model.tig00000093.101 no hits & (original description: no original description) 0.7457563931534965 100 evm.model.tig00020563.180 no hits & (original description: no original description) 0.7441447157124471 33 evm.model.tig00020556.91 (at1g53390 : 148.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 358264 Blast hits to 329272 proteins in 3990 species: Archae - 6355; Bacteria - 285632; Metazoa - 9572; Fungi - 6250; Plants - 5450; Viruses - 13; Other Eukaryotes - 44992 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 118.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 296.0) & (original description: no original description) 0.7440624406077861 82 evm.model.tig00000767.14 no hits & (original description: no original description) 0.7379138502673348 40 evm.model.tig00000632.4 no hits & (original description: no original description) 0.7361725433774081 44 evm.model.tig00020556.63 no hits & (original description: no original description) 0.7359471640683581 45 evm.model.tig00001181.13 no hits & (original description: no original description) 0.7349192651332458 55 evm.model.tig00021742.16 (at1g08860 : 186.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description) 0.73266603371332 69 evm.model.tig00021365.4 (at1g74310 : 597.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 594.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 1194.0) & (original description: no original description) 0.7309356629457077 55 evm.model.tig00000042.175 no hits & (original description: no original description) 0.7296237723115946 57 evm.model.tig00020510.126 no hits & (original description: no original description) 0.7289081331697909 62 evm.model.tig00001038.8 no hits & (original description: no original description) 0.7260885583366794 64 evm.model.tig00020684.49 no hits & (original description: no original description) 0.7256617203510977 70 evm.model.tig00000361.48 no hits & (original description: no original description) 0.7223212457279481 69 evm.model.tig00000857.19 (at2g32070 : 324.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT1G80780.2); Has 941 Blast hits to 931 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 149; Plants - 385; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 648.0) & (original description: no original description) 0.7218841791457911 70 evm.model.tig00000334.3 no hits & (original description: no original description) 0.7182329333242171 78 evm.model.tig00000455.47 no hits & (original description: no original description) 0.7163001507339801 83 evm.model.tig00001027.17 no hits & (original description: no original description) 0.7130797423999902 87 evm.model.tig00021127.157 no hits & (original description: no original description) 0.7115740298165928 90 evm.model.tig00020554.95 no hits & (original description: no original description) 0.7095541817691718 97