Sequence Description Alias PCC hrr evm.model.tig00000342.31 no hits & (original description: no original description) 0.9387464382099653 3 evm.model.tig00020531.33 no hits & (original description: no original description) 0.9347272718397498 3 evm.model.tig00020816.108 no hits & (original description: no original description) 0.918861049114367 7 evm.model.tig00000076.77 no hits & (original description: no original description) 0.9180715435716161 8 evm.model.tig00000882.6 no hits & (original description: no original description) 0.9130535814437262 11 evm.model.tig00021017.28 (original description: no original description) 0.912344341249442 19 evm.model.tig00020572.49 no hits & (original description: no original description) 0.9065528417642743 15 evm.model.tig00000042.91 (at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) & (original description: no original description) 0.8987343128032804 8 evm.model.tig00020572.46 no hits & (original description: no original description) 0.8979023207579803 18 evm.model.tig00000949.33 no hits & (original description: no original description) 0.8935029173216638 16 evm.model.tig00020830.58 no hits & (original description: no original description) 0.8923722395856079 25 evm.model.tig00000970.15 no hits & (original description: no original description) 0.8883142582686689 18 evm.model.tig00000025.20 (at5g23110 : 208.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description) 0.8881716165938388 13 evm.model.tig00020876.12 no hits & (original description: no original description) 0.8875977949051252 14 evm.model.tig00000478.6 no hits & (original description: no original description) 0.885740675479904 15 evm.model.tig00021433.23 no hits & (original description: no original description) 0.8853016394832491 16 evm.model.tig00001030.33 no hits & (original description: no original description) 0.8833006872067666 19 evm.model.tig00020816.107 no hits & (original description: no original description) 0.8815119181737124 30 evm.model.tig00000219.55 no hits & (original description: no original description) 0.8805875844221658 19 evm.model.tig00000076.76 no hits & (original description: no original description) 0.8803173632991016 20 evm.model.tig00021464.3 no hits & (original description: no original description) 0.8787294770386495 22 evm.model.tig00020572.47 no hits & (original description: no original description) 0.8784246675506449 22 evm.model.tig00000882.5 no hits & (original description: no original description) 0.8776099209328896 23 evm.model.tig00020572.48 no hits & (original description: no original description) 0.8775552483539397 24 evm.model.tig00000194.61 (original description: no original description) 0.8759856488057403 25 evm.model.tig00020592.62 no hits & (original description: no original description) 0.8743662123706177 26 evm.model.tig00020531.25 no hits & (original description: no original description) 0.8703328757872397 27 evm.model.tig00022075.31 (original description: no original description) 0.8696551276146393 36 evm.model.tig00001206.27 (original description: no original description) 0.8659357142147567 54 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8641660718755402 38 evm.model.tig00021534.2 no hits & (original description: no original description) 0.8625253568972685 31 evm.model.tig00001154.14 (at3g03110 : 523.0) Encodes a member of the exportin family (XPO1B)which function as receptors for nuclear transport.Along with XPO1A involved in the development of male and female gametophytes.; exportin 1B (XPO1B); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: pollen germination, protein import into nucleus, docking, pollen tube growth, embryo sac development, pollen development; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1A (TAIR:AT5G17020.1); Has 1366 Blast hits to 1341 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 258; Plants - 127; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 1046.0) & (original description: no original description) 0.8588999462641648 32 evm.model.tig00000269.62 no hits & (original description: no original description) 0.8588987804562979 33 evm.model.tig00020553.252 no hits & (original description: no original description) 0.8586803886589058 34 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8566385442992799 44 evm.model.tig00000194.62 (original description: no original description) 0.8565223461952675 42 evm.model.tig00000475.8 no hits & (original description: no original description) 0.8519817581183167 67 evm.model.tig00021350.42 no hits & (original description: no original description) 0.8505772363055263 38 evm.model.tig00000169.15 (original description: no original description) 0.8474434853290954 64 evm.model.tig00021179.31 no hits & (original description: no original description) 0.8456001026331254 40 evm.model.tig00020876.10 no hits & (original description: no original description) 0.8444479328903991 41 evm.model.tig00000158.47 no hits & (original description: no original description) 0.8442324296833333 42 evm.model.tig00000093.136 (at1g80070 : 229.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description) 0.8441829438432934 43 evm.model.tig00000970.16 no hits & (original description: no original description) 0.8440429748544005 44 evm.model.tig00021719.17 no hits & (original description: no original description) 0.8414123718181798 45 evm.model.tig00000076.78 (original description: no original description) 0.8408910877341594 65 evm.model.tig00000949.34 no hits & (original description: no original description) 0.8406839246662683 47 evm.model.tig00000523.49 no hits & (original description: no original description) 0.8400829056004279 48 evm.model.tig00020892.7 no hits & (original description: no original description) 0.8396310670472671 49 evm.model.tig00000269.63 no hits & (original description: no original description) 0.8368883537647982 58 evm.model.tig00000882.7 no hits & (original description: no original description) 0.8368245983223365 51 evm.model.tig00001333.1 no hits & (original description: no original description) 0.8364719763590611 52 evm.model.tig00000158.48 no hits & (original description: no original description) 0.8345600983037089 53 evm.model.tig00000158.57 no hits & (original description: no original description) 0.8342557866256234 54 evm.model.tig00001413.4 no hits & (original description: no original description) 0.8340719847798203 56 evm.model.tig00000241.15 (at4g35800 : 1627.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (q9tl05|rpoc1_nepol : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 3254.0) & (original description: no original description) 0.8336485257592258 66 evm.model.tig00000217.46 (at5g06600 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8319465047601008 57 evm.model.tig00000970.11 no hits & (original description: no original description) 0.8316990298090979 58 evm.model.tig00000169.13 (original description: no original description) 0.8316656935317156 72 evm.model.tig00000241.172 no hits & (original description: no original description) 0.8315196320874301 60 evm.model.tig00000691.24 no hits & (original description: no original description) 0.8312876540673048 61 evm.model.tig00020572.50 no hits & (original description: no original description) 0.8306696626327319 62 evm.model.tig00001413.5 no hits & (original description: no original description) 0.8306642253676936 63 evm.model.tig00001301.1 no hits & (original description: no original description) 0.8304944534860803 64 evm.model.tig00000691.23 no hits & (original description: no original description) 0.8297905162127167 65 evm.model.tig00000269.74 no hits & (original description: no original description) 0.8286423778671963 66 evm.model.tig00021518.25 no hits & (original description: no original description) 0.8277034300131147 88 evm.model.tig00000219.54 no hits & (original description: no original description) 0.8261643128511611 68 evm.model.tig00020553.272 no hits & (original description: no original description) 0.825111525775741 69 evm.model.tig00000431.12 no hits & (original description: no original description) 0.8211507767337375 70 evm.model.tig00000158.117 no hits & (original description: no original description) 0.8207724402433334 71 evm.model.tig00000404.40 (original description: no original description) 0.8195810420437333 93 evm.model.tig00000523.50 no hits & (original description: no original description) 0.8188612656776552 73 evm.model.tig00000158.120 no hits & (original description: no original description) 0.81855364719568 74 evm.model.tig00020848.61 0.8181892877465837 75 evm.model.tig00000480.16 no hits & (original description: no original description) 0.8177833138259396 76 evm.model.tig00000478.8 no hits & (original description: no original description) 0.8155154704466477 77 evm.model.tig00000475.9 no hits & (original description: no original description) 0.8120235604080421 80 evm.model.tig00021127.54 no hits & (original description: no original description) 0.8118775017555466 91 evm.model.tig00001164.8 (at5g42540 : 137.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing.; exoribonuclease 2 (XRN2); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1). & (reliability: 274.0) & (original description: no original description) 0.8116405928146432 82 evm.model.tig00021590.1 (original description: no original description) 0.8110051158908125 83 evm.model.tig00000865.27 (at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) & (original description: no original description) 0.8078190564421783 96 evm.model.tig00001030.34 no hits & (original description: no original description) 0.8066761438343049 87 evm.model.tig00000430.66 no hits & (original description: no original description) 0.8063515741957991 88 evm.model.tig00020892.10 no hits & (original description: no original description) 0.806218746286691 89 evm.model.tig00000158.118 no hits & (original description: no original description) 0.8042776936325207 90 evm.model.tig00020848.62 no hits & (original description: no original description) 0.8039220182831531 91 evm.model.tig00000459.37 no hits & (original description: no original description) 0.8023595571301166 99 evm.model.tig00000970.12 no hits & (original description: no original description) 0.8007074202925203 97 evm.model.tig00020572.63 no hits & (original description: no original description) 0.8006045014692166 98 evm.model.tig00021036.41 no hits & (original description: no original description) 0.7993468195085012 99