Sequence Description Alias PCC hrr evm.model.tig00021017.28 (original description: no original description) 0.9628684733949275 5 evm.model.tig00022075.31 (original description: no original description) 0.9507901773565743 6 evm.model.tig00000076.76 no hits & (original description: no original description) 0.9459502927014108 3 evm.model.tig00000076.78 (original description: no original description) 0.9401310860287063 10 evm.model.tig00020531.33 no hits & (original description: no original description) 0.9368282948593606 5 evm.model.tig00000194.62 (original description: no original description) 0.9367649794565571 10 evm.model.tig00000342.31 no hits & (original description: no original description) 0.9253767662269018 7 evm.model.tig00020892.18 no hits & (original description: no original description) 0.9180715435716161 8 evm.model.tig00000404.40 (original description: no original description) 0.9107274682509042 20 evm.model.tig00001030.33 no hits & (original description: no original description) 0.910147095626218 10 evm.model.tig00000194.61 (original description: no original description) 0.9068990906902545 12 evm.model.tig00001206.27 (original description: no original description) 0.9046226111796906 25 evm.model.tig00000093.136 (at1g80070 : 229.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description) 0.9030678161436434 13 evm.model.tig00021433.23 no hits & (original description: no original description) 0.9025239102525864 14 evm.model.tig00001301.1 no hits & (original description: no original description) 0.8925405913758457 15 evm.model.tig00000865.27 (at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) & (original description: no original description) 0.8869508248858394 19 evm.model.tig00000025.20 (at5g23110 : 208.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description) 0.8843309889161526 17 evm.model.tig00020531.25 no hits & (original description: no original description) 0.8776292643514896 18 evm.model.tig00000169.15 (original description: no original description) 0.8737115916889147 41 evm.model.tig00000169.13 (original description: no original description) 0.8706085252934745 36 evm.model.tig00000042.91 (at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) & (original description: no original description) 0.8685141285393159 21 evm.model.tig00020848.62 no hits & (original description: no original description) 0.8656745816770695 22 evm.model.tig00000158.117 no hits & (original description: no original description) 0.8614738138569802 23 evm.model.tig00000042.101 (original description: no original description) 0.8592963000601126 68 evm.model.tig00000949.33 no hits & (original description: no original description) 0.8553404422604404 51 evm.model.tig00020553.252 no hits & (original description: no original description) 0.8542906186165682 26 evm.model.tig00000955.33 (original description: no original description) 0.8464410645302965 72 evm.model.tig00020563.131 no hits & (original description: no original description) 0.8441597390787257 28 evm.model.tig00021462.18 no hits & (original description: no original description) 0.8433406036074541 56 evm.model.tig00000459.51 (at5g24740 : 80.9) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 161.8) & (original description: no original description) 0.8423381288844543 75 evm.model.tig00000455.20 no hits & (original description: no original description) 0.8344076294278816 41 evm.model.tig00020592.62 no hits & (original description: no original description) 0.8328212249890374 34 evm.model.tig00000581.7 no hits & (original description: no original description) 0.8300229264044207 86 evm.model.tig00020684.47 (q39610|dyha_chlre : 1367.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (at1g18610 : 85.9) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.8299432842018262 71 evm.model.tig00000480.28 no hits & (original description: no original description) 0.8293274972608842 38 evm.model.tig00000217.25 (at2g28290 : 284.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 233.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 532.0) & (original description: no original description) 0.8291809431040725 39 evm.model.tig00000194.26 (at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description) 0.8289802751198305 92 evm.model.tig00020553.133 no hits & (original description: no original description) 0.824216382385374 95 evm.model.tig00000480.16 no hits & (original description: no original description) 0.8214259591819549 43 evm.model.tig00021502.2 (at3g49600 : 223.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8180755421897452 45 evm.model.tig00000478.6 no hits & (original description: no original description) 0.8174453532839124 46 evm.model.tig00020801.50 no hits & (original description: no original description) 0.8169560377760092 47 evm.model.tig00000480.29 no hits & (original description: no original description) 0.8166974493383339 48 evm.model.tig00020944.22 no hits & (original description: no original description) 0.8141767413773715 49 evm.model.tig00000949.34 no hits & (original description: no original description) 0.8140433908447944 50 evm.model.tig00001413.5 no hits & (original description: no original description) 0.8125942713851521 51 evm.model.tig00000217.46 (at5g06600 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8062110873176621 53 evm.model.tig00021350.42 no hits & (original description: no original description) 0.8048068740740257 54 evm.model.tig00000970.15 no hits & (original description: no original description) 0.8045600274888344 57 evm.model.tig00021719.17 no hits & (original description: no original description) 0.8032636979612588 56 evm.model.tig00000480.25 no hits & (original description: no original description) 0.8026911019596986 57 evm.model.tig00001154.14 (at3g03110 : 523.0) Encodes a member of the exportin family (XPO1B)which function as receptors for nuclear transport.Along with XPO1A involved in the development of male and female gametophytes.; exportin 1B (XPO1B); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: pollen germination, protein import into nucleus, docking, pollen tube growth, embryo sac development, pollen development; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1A (TAIR:AT5G17020.1); Has 1366 Blast hits to 1341 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 258; Plants - 127; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 1046.0) & (original description: no original description) 0.8020533877602939 58 evm.model.tig00000219.55 no hits & (original description: no original description) 0.802018472858284 59 evm.model.tig00000480.30 no hits & (original description: no original description) 0.8014025422128805 61 evm.model.tig00000133.43 no hits & (original description: no original description) 0.7967002230123567 63 evm.model.tig00020816.108 no hits & (original description: no original description) 0.7964678605585244 74 evm.model.tig00000480.27 no hits & (original description: no original description) 0.7955165254925867 65 evm.model.tig00000169.14 no hits & (original description: no original description) 0.7937834930877931 66 evm.model.tig00000523.50 no hits & (original description: no original description) 0.7919830448101709 68 evm.model.tig00000158.120 no hits & (original description: no original description) 0.7915763711424714 69 evm.model.tig00020614.124 (at5g45140 : 199.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.7885810022937082 71 evm.model.tig00000430.66 no hits & (original description: no original description) 0.7860067633911062 72 evm.model.tig00020553.150 no hits & (original description: no original description) 0.7847700256063153 76 evm.model.tig00001030.34 no hits & (original description: no original description) 0.7844451226921524 75 evm.model.tig00020960.75 (at3g61690 : 217.0) nucleotidyltransferases; FUNCTIONS IN: nucleotidyltransferase activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934); BEST Arabidopsis thaliana protein match is: PAP/OAS1 substrate-binding domain superfamily (TAIR:AT3G51620.2); Has 793 Blast hits to 566 proteins in 156 species: Archae - 0; Bacteria - 43; Metazoa - 182; Fungi - 92; Plants - 200; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.7823096421699144 76 evm.model.tig00000241.172 no hits & (original description: no original description) 0.781304915194482 80 evm.model.tig00000342.22 no hits & (original description: no original description) 0.7806040693723626 79 evm.model.tig00000158.118 no hits & (original description: no original description) 0.7796512737011151 80 evm.model.tig00001110.2 no hits & (original description: no original description) 0.7764088530408894 83 evm.model.tig00021094.5 no hits & (original description: no original description) 0.7733531954547441 89 evm.model.tig00000158.47 no hits & (original description: no original description) 0.7718326970688602 91 evm.model.tig00000158.48 no hits & (original description: no original description) 0.7696146596247497 93 evm.model.tig00000037.16 no hits & (original description: no original description) 0.7671049970411667 95 evm.model.tig00020531.32 no hits & (original description: no original description) 0.7670691476901371 96 evm.model.tig00020572.46 no hits & (original description: no original description) 0.7664740361151101 97 evm.model.tig00020876.12 no hits & (original description: no original description) 0.7663510898191122 98