Sequence Description Alias PCC hrr evm.model.tig00000718.8 (o23920|hppd_dauca : 125.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 104.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.8404875729116187 2 evm.model.tig00000788.4 no hits & (original description: no original description) 0.8363919763835354 14 evm.model.tig00020780.34 no hits & (original description: no original description) 0.8238787697002705 17 evm.model.tig00020556.44 (at3g27710 : 223.0) ARIADNE 3 (ARI3); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 3131 Blast hits to 3105 proteins in 234 species: Archae - 0; Bacteria - 4; Metazoa - 1303; Fungi - 627; Plants - 676; Viruses - 17; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8228952215129219 11 evm.model.tig00000403.98 no hits & (original description: no original description) 0.8164664123831722 5 evm.model.tig00000248.22 no hits & (original description: no original description) 0.8131089829529776 7 evm.model.tig00020713.12 no hits & (original description: no original description) 0.8029144175977657 12 evm.model.tig00000796.9 no hits & (original description: no original description) 0.8013211866896521 15 evm.model.tig00000194.43 (at4g34270 : 169.0) TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) 0.7958633263646797 9 evm.model.tig00000882.23 no hits & (original description: no original description) 0.7932696470000854 10 evm.model.tig00000215.19 no hits & (original description: no original description) 0.7871281506804103 11 evm.model.tig00000555.14 no hits & (original description: no original description) 0.7863327513841804 18 evm.model.tig00021312.2 no hits & (original description: no original description) 0.7832235885152682 25 evm.model.tig00000025.57 no hits & (original description: no original description) 0.7714607984150061 16 evm.model.tig00000601.12 no hits & (original description: no original description) 0.7680253480040156 20 evm.model.tig00020830.6 (at2g06530 : 132.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description) 0.7668162449267862 32 evm.model.tig00021234.20 no hits & (original description: no original description) 0.7649181073246648 49 evm.model.tig00000826.26 no hits & (original description: no original description) 0.7616274431249024 24 evm.model.tig00021464.49 (at1g05000 : 181.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.7612683702796365 93 evm.model.tig00000903.29 (at2g25950 : 140.0) CONTAINS InterPro DOMAIN/s: Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT3G04780.1); Has 551 Blast hits to 551 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 233; Fungi - 139; Plants - 82; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.7586453179722035 39 evm.model.tig00000605.32 no hits & (original description: no original description) 0.7580408900723568 27 evm.model.tig00000269.82 no hits & (original description: no original description) 0.7578390597780884 44 evm.model.tig00000711.29 no hits & (original description: no original description) 0.7576602490947921 29 evm.model.tig00020830.83 no hits & (original description: no original description) 0.7574299275713079 58 evm.model.tig00000219.39 no hits & (original description: no original description) 0.75293674555241 32 evm.model.tig00000788.5 no hits & (original description: no original description) 0.752351201513054 33 evm.model.tig00021489.4 no hits & (original description: no original description) 0.748899937045614 37 evm.model.tig00020697.31 (at5g22440 : 146.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (q9sw75|rl10a_chlre : 125.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (reliability: 292.0) & (original description: no original description) 0.7468219146101058 99 evm.model.tig00020996.35 no hits & (original description: no original description) 0.7458707822449026 39 evm.model.tig00020892.14 no hits & (original description: no original description) 0.7455794151820218 40 evm.model.tig00020704.29 no hits & (original description: no original description) 0.7441625294203081 57 evm.model.tig00020531.15 no hits & (original description: no original description) 0.7434320041541435 43 evm.model.tig00020553.29 no hits & (original description: no original description) 0.7376689294675102 71 evm.model.tig00020830.82 no hits & (original description: no original description) 0.7370957522731768 46 evm.model.tig00020515.13 no hits & (original description: no original description) 0.735661914765456 47 evm.model.tig00021254.10 (at3g13235 : 214.0) ubiquitin family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase aspartic (InterPro:IPR021109), Ubiquitin subgroup (InterPro:IPR019956), Peptidase aspartic, eukaryotic predicted (InterPro:IPR019103), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A, retrovirus, catalytic (InterPro:IPR001995), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060). & (reliability: 428.0) & (original description: no original description) 0.731576432986329 50 evm.model.tig00020911.65 no hits & (original description: no original description) 0.7250523766058627 54 evm.model.tig00001373.12 no hits & (original description: no original description) 0.7245619051397785 55 evm.model.tig00000093.155 no hits & (original description: no original description) 0.7241460422603314 59 evm.model.tig00000711.34 no hits & (original description: no original description) 0.7237427589898311 71 evm.model.tig00020564.27 (at1g60750 : 176.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink). & (p40691|a115_tobac : 152.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 352.0) & (original description: no original description) 0.7234651101338555 58 evm.model.tig00001537.3 no hits & (original description: no original description) 0.7219515726989972 70 evm.model.tig00000310.14 no hits & (original description: no original description) 0.718233156313286 78 evm.model.tig00020902.52 no hits & (original description: no original description) 0.7164140132091166 63 evm.model.tig00000788.6 no hits & (original description: no original description) 0.714052984159513 79 evm.model.tig00000863.35 (at5g06600 : 85.5) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.7131189175936911 83 evm.model.tig00020710.108 no hits & (original description: no original description) 0.7127335395146774 71 evm.model.tig00000882.38 no hits & (original description: no original description) 0.7060034046062784 73 evm.model.tig00000241.36 (at3g03420 : 154.0) Ku70-binding family protein; CONTAINS InterPro DOMAIN/s: Peptidase M76, ATP23 (InterPro:IPR019165); Has 337 Blast hits to 337 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 144; Plants - 46; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.7045413558086506 75 evm.model.tig00000704.45 no hits & (original description: no original description) 0.7035948956299642 76 evm.model.tig00000076.131 (at5g25150 : 135.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (p25387|gblp_chlre : 127.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 256.0) & (original description: no original description) 0.6925002918897281 88 evm.model.tig00000788.7 no hits & (original description: no original description) 0.6900213988721539 91 evm.model.tig00000073.5 no hits & (original description: no original description) 0.6870531197120918 94 evm.model.tig00020848.29 (at5g23080 : 173.0) Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1.; TOUGH (TGH); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: multicellular organismal development, phloem or xylem histogenesis, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1604 (InterPro:IPR011666), SWAP/Surp (InterPro:IPR000061); Has 34900 Blast hits to 18983 proteins in 949 species: Archae - 12; Bacteria - 1329; Metazoa - 18979; Fungi - 3127; Plants - 2236; Viruses - 165; Other Eukaryotes - 9052 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.6858541729339187 97 evm.model.tig00000269.79 no hits & (original description: no original description) 0.6846107169367955 98 evm.model.tig00000525.1 (at5g15930 : 91.3) Encodes a putative plant adhesion molecule.; plant adhesion molecule 1 (PAM1); FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G02460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.6842135700194281 100