Sequence Description Alias PCC hrr evm.model.tig00001371.20 (at3g01480 : 194.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49939|tlp40_spiol : 193.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 388.0) & (original description: no original description) 0.8037674277004303 23 evm.model.tig00020610.65 (at2g43120 : 193.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.796866953179888 2 evm.model.tig00001094.34 (at1g48030 : 194.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 182.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 388.0) & (original description: no original description) 0.7875391887155476 5 evm.model.tig00000227.39 (at4g23430 : 103.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41578|pora_wheat : 82.0) Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) - Triticum aestivum (Wheat) & (reliability: 206.0) & (original description: no original description) 0.7866782981919284 21 evm.model.tig00021257.23 (at2g27680 : 209.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description) 0.7516668759014117 10 evm.model.tig00000203.20 (at3g25230 : 118.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43207|fkb70_wheat : 116.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 236.0) & (original description: no original description) 0.7489968690332903 6 evm.model.tig00020614.70 no hits & (original description: no original description) 0.7418266293795869 68 evm.model.tig00000663.36 no hits & (original description: no original description) 0.7284447244684282 58 evm.model.tig00000829.20 (q851x7|derl2_orysa : 177.0) Derlin-2 (OsDerlin 2-1) - Oryza sativa (Rice) & (at4g04860 : 175.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) 0.7226639521385471 10 evm.model.tig00001527.11 (q39817|calx_soybn : 245.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 243.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description) 0.7219238732745022 45 evm.model.tig00020944.37 (at2g26470 : 147.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.720747126772367 38 evm.model.tig00000626.8 (p42347|pi3k1_soybn : 109.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (at1g60490 : 108.0) Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.; vacuolar protein sorting 34 (VPS34); FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis; LOCATED IN: phosphoinositide 3-kinase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphoinositide 3-kinase, C2 (InterPro:IPR002420), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Protein kinase-like domain (InterPro:IPR011009), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3-kinase, Vps34 type (InterPro:IPR008290), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 3550 Blast hits to 3392 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 1514; Fungi - 819; Plants - 335; Viruses - 4; Other Eukaryotes - 878 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.7174743202815608 13 evm.model.tig00020554.114 no hits & (original description: no original description) 0.714805183650471 23 evm.model.tig00000498.86 no hits & (original description: no original description) 0.7147611090627006 30 evm.model.tig00020909.11 (at4g17050 : 129.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.713778875870587 79 evm.model.tig00020538.69 no hits & (original description: no original description) 0.7054191924862991 81 evm.model.tig00000769.25 no hits & (original description: no original description) 0.6995540494505141 19 evm.model.tig00000190.50 (at5g52820 : 173.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 149.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 346.0) & (original description: no original description) 0.698561407977264 23 evm.model.tig00001095.17 no hits & (original description: no original description) 0.6865200200492119 90 evm.model.tig00000093.34 (at1g20050 : 94.0) C-8 sterol isomerase; HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (q9ftz2|ebp_orysa : 91.3) Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase (EC 5.3.3.5) (Cholestenol Delta-isomerase) (Delta(8)-Delta(7) sterol isomerase) (D8-D7 sterol isomerase) - Oryza sativa (Rice) & (reliability: 188.0) & (original description: no original description) 0.6784481585583594 90 evm.model.tig00021719.12 no hits & (original description: no original description) 0.6611598785991083 31 evm.model.tig00021434.29 no hits & (original description: no original description) 0.6496372719337072 35 evm.model.tig00001154.30 (at4g02390 : 153.0) Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .; poly(ADP-ribose) polymerase (PP); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, nucleic acid binding; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 1052 Blast hits to 1033 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 556; Fungi - 107; Plants - 166; Viruses - 5; Other Eukaryotes - 203 (source: NCBI BLink). & (q9zsv1|parp1_maize : 152.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Zea mays (Maize) & (reliability: 306.0) & (original description: no original description) 0.6438704411667844 64 evm.model.tig00000711.6 no hits & (original description: no original description) 0.6391225026519501 73 evm.model.tig00020538.66 no hits & (original description: no original description) 0.6369244053747951 40 evm.model.tig00001041.33 no hits & (original description: no original description) 0.6297199311809323 92 evm.model.tig00001038.21 no hits & (original description: no original description) 0.618600448109013 51 evm.model.tig00000350.39 no hits & (original description: no original description) 0.6185881547144767 79 evm.model.tig00020554.52 (at2g38730 : 98.6) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 14613 Blast hits to 14579 proteins in 2550 species: Archae - 106; Bacteria - 5772; Metazoa - 2906; Fungi - 1375; Plants - 1228; Viruses - 4; Other Eukaryotes - 3222 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description) 0.6173490396534842 54 evm.model.tig00001286.12 no hits & (original description: no original description) 0.6049909159385866 62 evm.model.tig00000852.3 no hits & (original description: no original description) 0.5859250704435945 81 evm.model.tig00020939.1 no hits & (original description: no original description) 0.5823457601166847 87 evm.model.tig00021176.4 (at5g08560 : 99.8) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (reliability: 199.6) & (original description: no original description) 0.5748857827214233 96 evm.model.tig00021127.191 no hits & (original description: no original description) 0.5747268111479789 97