Sequence Description Alias PCC hrr evm.model.tig00000215.123 (at4g14790 : 215.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description) 0.977622019179711 21 evm.model.tig00000079.8 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020516.12 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00021761.14 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00021534.13 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00000123.30 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020629.72 (p31843|rrpo_oenbe : 92.4) RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Bertero's evening primrose) & (atmg00860 : 83.2) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 166.4) & (original description: no original description) 0.977622019179711 21 evm.model.tig00021357.56 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00000443.22 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020960.47 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020801.57 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00000449.28 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020960.11 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00021294.2 no hits & (original description: no original description) 0.9776220191797107 21 evm.model.tig00000178.43 no hits & (original description: no original description) 0.9776220191797106 21 evm.model.tig00000852.13 no hits & (original description: no original description) 0.9776220191797106 21 evm.model.tig00000206.5 no hits & (original description: no original description) 0.9776220191797104 21 evm.model.tig00000042.97 no hits & (original description: no original description) 0.9701947696435731 21 evm.model.tig00021168.36 no hits & (original description: no original description) 0.9674970942607696 21 evm.model.tig00000025.56 no hits & (original description: no original description) 0.9649654642276957 21 evm.model.tig00020531.22 no hits & (original description: no original description) 0.9603664078267319 21 evm.model.tig00020531.20 no hits & (original description: no original description) 0.933790411344098 22 evm.model.tig00000828.10 (at4g36800 : 208.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (p35130|ubc2_medsa : 105.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 412.0) & (original description: no original description) 0.8948599801646053 23 evm.model.tig00021719.23 no hits & (original description: no original description) 0.8755737488169725 24 evm.model.tig00020746.15 no hits & (original description: no original description) 0.8710101576525199 25 evm.model.tig00001025.10 no hits & (original description: no original description) 0.870887164385446 26 evm.model.tig00000704.37 no hits & (original description: no original description) 0.8672234426530531 27 evm.model.tig00000451.21 no hits & (original description: no original description) 0.8659769721006753 28 evm.model.tig00021374.2 no hits & (original description: no original description) 0.8575313731068301 29 evm.model.tig00001041.28 no hits & (original description: no original description) 0.8533690594390233 30 evm.model.tig00001177.9 no hits & (original description: no original description) 0.8522902075375107 31 evm.model.tig00000158.5 no hits & (original description: no original description) 0.849529732132591 32 evm.model.tig00020555.7 no hits & (original description: no original description) 0.8433466250375271 33 evm.model.tig00021123.18 no hits & (original description: no original description) 0.8369460044857984 34 evm.model.tig00000317.15 no hits & (original description: no original description) 0.8317693699537836 35 evm.model.tig00020801.17 no hits & (original description: no original description) 0.8303715024053213 36 evm.model.tig00000985.4 no hits & (original description: no original description) 0.7879311019580281 37 evm.model.tig00001264.27 (at5g02960 : 160.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (p46297|rs23_fraan : 160.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (reliability: 320.0) & (original description: no original description) 0.7791121849787518 79 evm.model.tig00021137.56 no hits & (original description: no original description) 0.7734365243681539 39 evm.model.tig00000681.5 no hits & (original description: no original description) 0.7727441481146246 40 evm.model.tig00000912.11 no hits & (original description: no original description) 0.7552205506288072 41 evm.model.tig00020592.68 no hits & (original description: no original description) 0.746444927863656 42 evm.model.tig00001501.12 (at1g03910 : 95.9) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (reliability: 191.8) & (original description: no original description) 0.7404551689650047 45 evm.model.tig00020610.38 (at2g42740 : 221.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 221.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (reliability: 440.0) & (original description: no original description) 0.7315355784663382 86 evm.model.tig00021072.11 no hits & (original description: no original description) 0.7300714596405536 47 evm.model.tig00000764.5 no hits & (original description: no original description) 0.7268280826487279 49 evm.model.tig00020510.139 no hits & (original description: no original description) 0.7252269575854672 80 evm.model.tig00021127.50 no hits & (original description: no original description) 0.707346149434747 65 evm.model.tig00001542.9 no hits & (original description: no original description) 0.700479747234713 77 evm.model.tig00021181.13 (at1g73230 : 162.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 316.0) & (original description: no original description) 0.6940596582757954 83 evm.model.tig00000053.12 no hits & (original description: no original description) 0.6923181579106785 63 evm.model.tig00000718.64 (q9xhe4|rl37a_goshi : 145.0) 60S ribosomal protein L37a - Gossypium hirsutum (Upland cotton) & (at3g60245 : 142.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G10950.1); Has 1052 Blast hits to 1052 proteins in 365 species: Archae - 290; Bacteria - 0; Metazoa - 325; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.6831353000323607 68 evm.model.tig00021572.15 no hits & (original description: no original description) 0.6792635387131298 70 evm.model.tig00000743.7 no hits & (original description: no original description) 0.6772076459548927 73 evm.model.tig00000806.30 no hits & (original description: no original description) 0.6649248568904566 80 evm.model.tig00021290.9 (at3g04400 : 253.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 249.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (reliability: 506.0) & (original description: no original description) 0.6616773039100685 92 evm.model.tig00021338.2 no hits & (original description: no original description) 0.6613049509685602 85 evm.model.tig00020592.65 no hits & (original description: no original description) 0.6613049490375206 86 evm.model.tig00021366.11 no hits & (original description: no original description) 0.6546379108751641 88 evm.model.tig00020592.33 no hits & (original description: no original description) 0.6543570128871823 89 evm.model.tig00020903.34 (q9xhs0|rs12_horvu : 149.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 146.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description) 0.6423062217237981 100