Sequence Description Alias PCC hrr evm.model.tig00000215.123 (at4g14790 : 215.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description) 0.9999999999999999 8 evm.model.tig00000079.8 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00020516.12 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00021294.2 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00021761.14 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00021534.13 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00000123.30 no hits & (original description: no original description) 0.9999999999999999 8 evm.model.tig00020629.72 (p31843|rrpo_oenbe : 92.4) RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Bertero's evening primrose) & (atmg00860 : 83.2) hypothetical protein; DNA/RNA polymerases superfamily protein. & (reliability: 166.4) & (original description: no original description) 0.9999999999999999 8 evm.model.tig00000443.22 no hits & (original description: no original description) 0.9999999999999999 9 evm.model.tig00020960.47 no hits & (original description: no original description) 0.9999999999999999 10 evm.model.tig00020801.57 no hits & (original description: no original description) 0.9999999999999999 11 evm.model.tig00000449.28 no hits & (original description: no original description) 0.9999999999999999 12 evm.model.tig00020960.11 no hits & (original description: no original description) 0.9999999999999999 13 evm.model.tig00000178.43 no hits & (original description: no original description) 0.9999999999999997 14 evm.model.tig00000852.13 no hits & (original description: no original description) 0.9999999999999997 15 evm.model.tig00000206.5 no hits & (original description: no original description) 0.9999999999999996 16 evm.model.tig00000042.97 no hits & (original description: no original description) 0.9931426502081366 17 evm.model.tig00021168.36 no hits & (original description: no original description) 0.992132228765757 18 evm.model.tig00000025.56 no hits & (original description: no original description) 0.9880300485396634 19 evm.model.tig00020531.22 no hits & (original description: no original description) 0.9848796739834119 20 evm.model.tig00020796.4 no hits & (original description: no original description) 0.977622019179711 21 evm.model.tig00020531.20 no hits & (original description: no original description) 0.9601439658456159 22 evm.model.tig00000828.10 (at4g36800 : 208.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (p35130|ubc2_medsa : 105.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 412.0) & (original description: no original description) 0.9243358165413594 23 evm.model.tig00021719.23 no hits & (original description: no original description) 0.900503924767177 24 evm.model.tig00001025.10 no hits & (original description: no original description) 0.8973106641843959 25 evm.model.tig00020746.15 no hits & (original description: no original description) 0.8937862640461413 26 evm.model.tig00000451.21 no hits & (original description: no original description) 0.8899278174640163 27 evm.model.tig00001177.9 no hits & (original description: no original description) 0.8822179984570615 28 evm.model.tig00021374.2 no hits & (original description: no original description) 0.8814500140938406 29 evm.model.tig00001041.28 no hits & (original description: no original description) 0.8759558965063602 30 evm.model.tig00000158.5 no hits & (original description: no original description) 0.8753744296982642 31 evm.model.tig00000704.37 no hits & (original description: no original description) 0.8710308065246786 32 evm.model.tig00020555.7 no hits & (original description: no original description) 0.867982879156112 33 evm.model.tig00021123.18 no hits & (original description: no original description) 0.8661182224064919 34 evm.model.tig00000317.15 no hits & (original description: no original description) 0.8580275963245847 35 evm.model.tig00020801.17 no hits & (original description: no original description) 0.8551905782017525 36 evm.model.tig00001264.27 (at5g02960 : 160.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (p46297|rs23_fraan : 160.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (reliability: 320.0) & (original description: no original description) 0.8137312046258742 40 evm.model.tig00021137.56 no hits & (original description: no original description) 0.7966318226651503 38 evm.model.tig00000985.4 no hits & (original description: no original description) 0.7903431120937302 39 evm.model.tig00000681.5 no hits & (original description: no original description) 0.7803373106863406 40 evm.model.tig00001501.12 (at1g03910 : 95.9) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (reliability: 191.8) & (original description: no original description) 0.7703561006742775 41 evm.model.tig00020592.68 no hits & (original description: no original description) 0.7684915604473573 42 evm.model.tig00021357.17 no hits & (original description: no original description) 0.762167251917247 81 evm.model.tig00021072.11 no hits & (original description: no original description) 0.7573188673596881 46 evm.model.tig00000632.3 (at1g26880 : 109.0) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 937 Blast hits to 937 proteins in 311 species: Archae - 67; Bacteria - 0; Metazoa - 288; Fungi - 137; Plants - 198; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (p41098|rl34_tobac : 109.0) 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco) & (reliability: 218.0) & (original description: no original description) 0.7514311753479217 95 evm.model.tig00000764.5 no hits & (original description: no original description) 0.7476682222476315 50 evm.model.tig00021127.50 no hits & (original description: no original description) 0.7466624201902377 51 evm.model.tig00020510.139 no hits & (original description: no original description) 0.746042006460627 54 evm.model.tig00020610.38 (at2g42740 : 221.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 221.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (reliability: 440.0) & (original description: no original description) 0.7440903470452183 61 evm.model.tig00000912.11 no hits & (original description: no original description) 0.7407555967212971 56 evm.model.tig00001206.7 (at3g05560 : 112.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.7205022534050746 97 evm.model.tig00000743.7 no hits & (original description: no original description) 0.7175171045508892 64 evm.model.tig00000663.33 no hits & (original description: no original description) 0.7164137447119996 65 evm.model.tig00001542.9 no hits & (original description: no original description) 0.7153347233609497 66 evm.model.tig00021572.15 no hits & (original description: no original description) 0.7077406784422233 71 evm.model.tig00021181.13 (at1g73230 : 162.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 316.0) & (original description: no original description) 0.7038241678580688 73 evm.model.tig00000806.30 no hits & (original description: no original description) 0.6923758964583936 79 evm.model.tig00000852.6 no hits & (original description: no original description) 0.6923083948885255 80 evm.model.tig00021290.9 (at3g04400 : 253.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 249.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (reliability: 506.0) & (original description: no original description) 0.6918761784010531 81 evm.model.tig00021168.69 no hits & (original description: no original description) 0.6902351690547455 82 evm.model.tig00000053.12 no hits & (original description: no original description) 0.6889598800620124 83 evm.model.tig00021338.2 no hits & (original description: no original description) 0.6810765057520392 88 evm.model.tig00020592.65 no hits & (original description: no original description) 0.6810765037883576 89 evm.model.tig00000718.64 (q9xhe4|rl37a_goshi : 145.0) 60S ribosomal protein L37a - Gossypium hirsutum (Upland cotton) & (at3g60245 : 142.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G10950.1); Has 1052 Blast hits to 1052 proteins in 365 species: Archae - 290; Bacteria - 0; Metazoa - 325; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.6805202710628703 90 evm.model.tig00000194.50 (at4g27090 : 121.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p55844|rl14_pea : 112.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (reliability: 242.0) & (original description: no original description) 0.6774167582524666 91 evm.model.tig00020903.34 (q9xhs0|rs12_horvu : 149.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at2g32060 : 146.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1); Has 951 Blast hits to 951 proteins in 327 species: Archae - 187; Bacteria - 0; Metazoa - 313; Fungi - 169; Plants - 131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description) 0.6747591186313968 92 evm.model.tig00021366.11 no hits & (original description: no original description) 0.6742964024439153 95