Sequence Description Alias PCC hrr evm.model.tig00020704.29 no hits & (original description: no original description) 0.8712025499668046 8 evm.model.tig00000788.6 no hits & (original description: no original description) 0.8657165454981313 10 evm.model.tig00000788.5 no hits & (original description: no original description) 0.8605774515121366 11 evm.model.tig00000269.79 no hits & (original description: no original description) 0.8569416996503365 8 evm.model.tig00000796.9 no hits & (original description: no original description) 0.855302037550562 5 evm.model.tig00000788.4 no hits & (original description: no original description) 0.8476711834958434 12 evm.model.tig00000788.7 no hits & (original description: no original description) 0.8379840983824797 12 evm.model.tig00000788.8 no hits & (original description: no original description) 0.8361624616816464 13 evm.model.tig00000269.81 no hits & (original description: no original description) 0.8350714045661454 14 evm.model.tig00020553.29 no hits & (original description: no original description) 0.820023190584869 10 evm.model.tig00000310.14 no hits & (original description: no original description) 0.8038226128386473 29 evm.model.tig00000219.39 no hits & (original description: no original description) 0.7910053155296749 18 evm.model.tig00000269.78 no hits & (original description: no original description) 0.7836476102126849 32 evm.model.tig00020938.4 no hits & (original description: no original description) 0.7726001088174504 14 evm.model.tig00020675.59 no hits & (original description: no original description) 0.7647570624362477 82 evm.model.tig00020713.12 no hits & (original description: no original description) 0.7628438044416367 32 evm.model.tig00000269.80 no hits & (original description: no original description) 0.7580856432874297 48 evm.model.tig00000269.82 no hits & (original description: no original description) 0.7578177539953548 45 evm.model.tig00020780.34 no hits & (original description: no original description) 0.7531614039299724 88 evm.model.tig00020996.34 no hits & (original description: no original description) 0.7512557721636954 26 evm.model.tig00000215.19 no hits & (original description: no original description) 0.746464919878783 21 evm.model.tig00020904.138 no hits & (original description: no original description) 0.7395559398660526 22 evm.model.tig00021489.4 no hits & (original description: no original description) 0.7384100603869176 34 evm.model.tig00020848.29 (at5g23080 : 173.0) Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1.; TOUGH (TGH); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: multicellular organismal development, phloem or xylem histogenesis, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1604 (InterPro:IPR011666), SWAP/Surp (InterPro:IPR000061); Has 34900 Blast hits to 18983 proteins in 949 species: Archae - 12; Bacteria - 1329; Metazoa - 18979; Fungi - 3127; Plants - 2236; Viruses - 165; Other Eukaryotes - 9052 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.7339972068389882 40 evm.model.tig00020965.41 no hits & (original description: no original description) 0.7334799223828922 31 evm.model.tig00000764.7 no hits & (original description: no original description) 0.7332935482435204 100 evm.model.tig00000737.21 no hits & (original description: no original description) 0.7310592174611126 38 evm.model.tig00020556.44 (at3g27710 : 223.0) ARIADNE 3 (ARI3); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 3131 Blast hits to 3105 proteins in 234 species: Archae - 0; Bacteria - 4; Metazoa - 1303; Fungi - 627; Plants - 676; Viruses - 17; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.7295060189931374 99 evm.model.tig00020704.31 no hits & (original description: no original description) 0.7280316534877302 90 evm.model.tig00021374.5 no hits & (original description: no original description) 0.7242131227091418 42 evm.model.tig00000718.8 (o23920|hppd_dauca : 125.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 104.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.7232820691098117 33 evm.model.tig00000949.17 (at5g41360 : 573.0) Encodes XPB2, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.; homolog of Xeroderma pigmentosum complementation group B 2 (XPB2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to UV-B, N-terminal protein myristoylation; EXPRESSED IN: whole plant; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), Xeroderma pigmentosum group B protein (XP-B) (InterPro:IPR001161), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: homolog of xeroderma pigmentosum complementation group B 1 (TAIR:AT5G41370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1146.0) & (original description: no original description) 0.7225999211881002 51 evm.model.tig00021489.5 no hits & (original description: no original description) 0.7219784690206754 35 evm.model.tig00021072.15 no hits & (original description: no original description) 0.7213066464955301 85 evm.model.tig00000475.16 no hits & (original description: no original description) 0.7197085707561759 37 evm.model.tig00000157.87 no hits & (original description: no original description) 0.7166038364432207 38 evm.model.tig00000718.9 no hits & (original description: no original description) 0.7127335395146774 71 evm.model.tig00000788.34 (o81122|etr1_maldo : 127.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (at2g01830 : 125.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.710806945142984 74 evm.model.tig00000767.18 no hits & (original description: no original description) 0.69919536628476 44 evm.model.tig00000076.44 no hits & (original description: no original description) 0.6988973032295127 46 evm.model.tig00000767.14 no hits & (original description: no original description) 0.6967844288671252 81 evm.model.tig00020964.20 no hits & (original description: no original description) 0.6967222279881536 48 evm.model.tig00020927.70 no hits & (original description: no original description) 0.6902657939737576 50 evm.model.tig00020943.72 (at3g59380 : 246.0) Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.; farnesyltransferase A (FTA); CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1351 Blast hits to 1070 proteins in 249 species: Archae - 32; Bacteria - 58; Metazoa - 584; Fungi - 296; Plants - 191; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (o24304|pfta_pea : 236.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (reliability: 492.0) & (original description: no original description) 0.6900321117184284 51 evm.model.tig00000042.175 no hits & (original description: no original description) 0.6894455394385182 96 evm.model.tig00020675.105 no hits & (original description: no original description) 0.689317527819155 53 evm.model.tig00020603.12 no hits & (original description: no original description) 0.6886591231354692 54 evm.model.tig00000113.26 no hits & (original description: no original description) 0.6864877138680654 55 evm.model.tig00000882.38 no hits & (original description: no original description) 0.6854869875665928 68 evm.model.tig00000241.36 (at3g03420 : 154.0) Ku70-binding family protein; CONTAINS InterPro DOMAIN/s: Peptidase M76, ATP23 (InterPro:IPR019165); Has 337 Blast hits to 337 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 144; Plants - 46; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.6753461165436173 77 evm.model.tig00020996.35 no hits & (original description: no original description) 0.6751579982644856 67 evm.model.tig00001302.16 (at2g16940 : 187.0) Splicing factor, CC1-like; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Splicing factor, CC1-like (InterPro:IPR006509), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like (TAIR:AT5G09880.1). & (reliability: 374.0) & (original description: no original description) 0.6746055444683825 61 evm.model.tig00021133.28 no hits & (original description: no original description) 0.6674564814317374 67 evm.model.tig00000248.22 no hits & (original description: no original description) 0.6633306230839897 88 evm.model.tig00000632.4 no hits & (original description: no original description) 0.6620997335436076 84 evm.model.tig00001373.12 no hits & (original description: no original description) 0.6619521652244161 75 evm.model.tig00021612.24 no hits & (original description: no original description) 0.6609807475262878 69 evm.model.tig00021290.18 no hits & (original description: no original description) 0.654809336990133 78 evm.model.tig00021105.67 (at1g66730 : 225.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description) 0.6528012612252231 76 evm.model.tig00020685.20 no hits & (original description: no original description) 0.6527347206128924 100 evm.model.tig00020710.128 no hits & (original description: no original description) 0.6388150460883182 89 evm.model.tig00000788.27 no hits & (original description: no original description) 0.6376785235549777 92 evm.model.tig00001307.8 no hits & (original description: no original description) 0.6362384673194821 94 evm.model.tig00020830.121 (at1g67370 : 92.0) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.; ASYNAPTIC 1 (ASY1); CONTAINS InterPro DOMAIN/s: SWIRM (InterPro:IPR007526), DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT4G32200.1); Has 527 Blast hits to 490 proteins in 159 species: Archae - 0; Bacteria - 18; Metazoa - 158; Fungi - 114; Plants - 58; Viruses - 21; Other Eukaryotes - 158 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description) 0.6304220168028608 97