Sequence Description Alias PCC hrr Kfl00025_0400 (at2g06210 : 390.0) Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 8 (ELF8); FUNCTIONS IN: binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, histone methylation, negative regulation of flower development; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 39956 Blast hits to 25035 proteins in 1980 species: Archae - 1189; Bacteria - 13149; Metazoa - 9789; Fungi - 2497; Plants - 1315; Viruses - 192; Other Eukaryotes - 11825 (source: NCBI BLink). & (reliability: 780.0) & (original description: no original description) kfl00025_0400_v1.1 0.9682321921787458 17 Kfl00878_0020 no hits & (original description: no original description) kfl00878_0020_v1.1 0.9601277294106695 25 Kfl00145_0060 (at4g35785 : 123.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 246.0) & (original description: no original description) kfl00145_0060_v1.1 0.9558946096876761 50 Kfl00333_0160 no hits & (original description: no original description) kfl00333_0160_v1.1 0.955618860678777 50 Kfl00555_0020 no hits & (original description: no original description) kfl00555_0020_v1.1 0.9503598998655582 36 Kfl00584_0030 no hits & (original description: no original description) kfl00584_0030_v1.1 0.9501067134578903 64 Kfl00241_0160 no hits & (original description: no original description) kfl00241_0160_v1.1 0.9490892183149158 68 Kfl00036_0220 (at5g06440 : 207.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3). & (reliability: 414.0) & (original description: no original description) kfl00036_0220_v1.1 0.9487691992633092 49 Kfl00627_0070 no hits & (original description: no original description) kfl00627_0070_v1.1 0.9486399072963997 28 Kfl01494_0010 no hits & (original description: no original description) kfl01494_0010_v1.1 0.9461864664472377 54 Kfl00019_0130 (at5g05460 : 335.0) Glycosyl hydrolase family 85 ; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 85 (InterPro:IPR005201), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 480 Blast hits to 472 proteins in 209 species: Archae - 0; Bacteria - 262; Metazoa - 108; Fungi - 28; Plants - 47; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description) kfl00019_0130_v1.1 0.9460126894228922 52 Kfl00444_0050 no hits & (original description: no original description) kfl00444_0050_v1.1 0.9457961482738471 20 Kfl00086_0240 (at1g09920 : 141.0) TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description) kfl00086_0240_v1.1 0.9455072227853126 49 Kfl01293_0010 no hits & (original description: no original description) kfl01293_0010_v1.1 0.9446199499613267 75 Kfl00331_0150 (at5g62300 : 189.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT3G45030.1); Has 7487 Blast hits to 7487 proteins in 2603 species: Archae - 270; Bacteria - 4745; Metazoa - 380; Fungi - 144; Plants - 182; Viruses - 0; Other Eukaryotes - 1766 (source: NCBI BLink). & (p35686|rs20_orysa : 182.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (reliability: 378.0) & (original description: no original description) kfl00331_0150_v1.1 0.9445209002408451 27 Kfl00237_0050 no hits & (original description: no original description) kfl00237_0050_v1.1 0.944442667139149 45 Kfl00678_0070 no hits & (original description: no original description) kfl00678_0070_v1.1 0.9444407117036003 75 Kfl00695_0020 no hits & (original description: no original description) kfl00695_0020_v1.1 0.9443160143071193 28 Kfl00160_0110 no hits & (original description: no original description) kfl00160_0110_v1.1 0.9434361756409718 65 Kfl00048_0310 no hits & (original description: no original description) kfl00048_0310_v1.1 0.9428184666563464 49 Kfl00110_0080 (at3g20680 : 97.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 37 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 194.8) & (original description: no original description) kfl00110_0080_v1.1 0.9419792466044586 70 Kfl00258_0180 no hits & (original description: no original description) kfl00258_0180_v1.1 0.9415883164689177 85 Kfl00463_0080 no hits & (original description: no original description) kfl00463_0080_v1.1 0.9414798922104957 30 Kfl00032_0140 (at5g24460 : 169.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) kfl00032_0140_v1.1 0.9414252498842897 28 Kfl00110_0150 (at2g37600 : 143.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (p52866|rl36_dauca : 105.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (reliability: 286.0) & (original description: no original description) kfl00110_0150_v1.1 0.9413659649455762 47 Kfl00023_0210 no hits & (original description: no original description) kfl00023_0210_v1.1 0.9397504914691872 33 Kfl00953_0030 no hits & (original description: no original description) kfl00953_0030_v1.1 0.9391097668500047 33 Kfl00014_0690 (at2g03390 : 99.4) uvrB/uvrC motif-containing protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hemimethylated DNA-binding domain (InterPro:IPR011722), UvrB/UvrC protein (InterPro:IPR001943). & (reliability: 198.8) & (original description: no original description) kfl00014_0690_v1.1 0.9372459441343253 38 Kfl00885_0040 (at1g18260 : 116.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description) kfl00885_0040_v1.1 0.9357936632936434 39 Kfl00375_0160 (at5g52030 : 171.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT1G05270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description) kfl00375_0160_v1.1 0.9350131968521674 75 Kfl00020_0200 no hits & (original description: no original description) kfl00020_0200_v1.1 0.9338735195080882 81 Kfl00297_0140 (at3g07080 : 114.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT4G32140.1); Has 3286 Blast hits to 3282 proteins in 690 species: Archae - 51; Bacteria - 1416; Metazoa - 341; Fungi - 278; Plants - 200; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) kfl00297_0140_v1.1 0.9334792422491353 56 Kfl00365_0070 (at2g38910 : 186.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 20 (CPK20); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 134628 Blast hits to 127183 proteins in 3957 species: Archae - 159; Bacteria - 14419; Metazoa - 50012; Fungi - 17942; Plants - 28393; Viruses - 493; Other Eukaryotes - 23210 (source: NCBI BLink). & (p49101|cdpk2_maize : 172.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 372.0) & (original description: no original description) kfl00365_0070_v1.1, kfl00365_0070_v1.1 0.932471071485832 59 Kfl00107_0140 (at4g04870 : 156.0) Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria.; cardiolipin synthase (CLS); FUNCTIONS IN: phosphatidyltransferase activity, cardiolipin synthase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 2 (TAIR:AT3G55030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description) kfl00107_0140_v1.1 0.9323976538528815 86 Kfl01567_0010 no hits & (original description: no original description) kfl01567_0010_v1.1 0.9320665849815558 99 Kfl00005_0500 no hits & (original description: no original description) kfl00005_0500_v1.1 0.9317832519275642 49 Kfl00761_0070 (at3g04400 : 234.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 231.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (reliability: 468.0) & (original description: no original description) kfl00761_0070_v1.1 0.9315262218747505 62 Kfl00826_0020 (original description: no original description) kfl00826_0020_v1.1 0.9310689136542003 53 Kfl00209_0150 (at5g05550 : 103.0) sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 359 Blast hits to 349 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) kfl00209_0150_v1.1 0.92989206975432 79 Kfl00896_0030 (at5g61450 : 278.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description) kfl00896_0030_v1.1 0.9298496994112031 80 Kfl00890_0030 no hits & (original description: no original description) kfl00890_0030_v1.1 0.9295433098757845 65 Kfl01572_0030 no hits & (original description: no original description) kfl01572_0030_v1.1 0.9294309966091713 76 Kfl00266_0090 no hits & (original description: no original description) kfl00266_0090_v1.1 0.9293343637420232 67 Kfl00474_g11 no hits & (original description: no original description) kfl00474_g11_v1.1 0.9292736845306607 73 Kfl00009_0360 no hits & (original description: no original description) kfl00009_0360_v1.1 0.9285718128676306 71 Kfl00984_0010 no hits & (original description: no original description) kfl00984_0010_v1.1 0.9282846956034586 72 Kfl00276_0070 (at1g18260 : 106.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description) kfl00276_0070_v1.1 0.9279160107997704 75 Kfl00247_0090 (at1g02680 : 115.0) TBP-associated factor 13 (TAF13); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding; INVOLVED IN: transcription initiation, transcription from RNA polymerase II promoter; LOCATED IN: transcription factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IID, 18kDa subunit (InterPro:IPR003195), Histone-fold (InterPro:IPR009072); Has 554 Blast hits to 554 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 284; Plants - 44; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) kfl00247_0090_v1.1 0.92765644338733 76 Kfl00633_0020 no hits & (original description: no original description) kfl00633_0020_v1.1 0.9271409676092123 87 Kfl00264_0070 (at1g22630 : 83.2) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) kfl00264_0070_v1.1 0.9267036218103227 83 Kfl00396_0140 no hits & (original description: no original description) kfl00396_0140_v1.1 0.9260991320745449 93 Kfl00265_0095 no hits & (original description: no original description) kfl00265_0095_v1.1 0.92502646534679 93 Kfl00753_0070 (at5g61670 : 328.0) Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.; BEST Arabidopsis thaliana protein match is: chaperone protein dnaJ-related (TAIR:AT5G06130.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description) kfl00753_0070_v1.1 0.9246616969473624 95 Kfl00104_0360 no hits & (original description: no original description) kfl00104_0360_v1.1 0.9245659260172494 96 Kfl00220_0060 no hits & (original description: no original description) kfl00220_0060_v1.1 0.9238930343320654 100