Sequence Description Alias PCC hrr Kfl00034_0350 (at3g55340 : 157.0) Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.; phragmoplastin interacting protein 1 (PHIP1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 17490 Blast hits to 13137 proteins in 598 species: Archae - 10; Bacteria - 621; Metazoa - 8175; Fungi - 2466; Plants - 2451; Viruses - 16; Other Eukaryotes - 3751 (source: NCBI BLink). & (reliability: 314.0) & (original description: no original description) kfl00034_0350_v1.1 0.895042760331657 15 Kfl00546_0020 no hits & (original description: no original description) kfl00546_0020_v1.1 0.8927025888268958 7 Kfl00115_0200 (at1g72320 : 276.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 23 (PUM23); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description) kfl00115_0200_v1.1 0.8891007147200701 49 Kfl00470_0040 (at4g01050 : 94.0) hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.; thylakoid rhodanese-like (TROL); FUNCTIONS IN: protein binding; INVOLVED IN: defense response to bacterium, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G25480.1); Has 6015 Blast hits to 4196 proteins in 851 species: Archae - 23; Bacteria - 2268; Metazoa - 876; Fungi - 517; Plants - 614; Viruses - 167; Other Eukaryotes - 1550 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) kfl00470_0040_v1.1 0.885863919627058 32 Kfl00115_0050 (at4g02220 : 173.0) zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320), Zinc finger, MYND-type (InterPro:IPR002893); BEST Arabidopsis thaliana protein match is: programmed cell death 2 C-terminal domain-containing protein (TAIR:AT5G64830.1); Has 934 Blast hits to 894 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 162; Plants - 228; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) kfl00115_0050_v1.1 0.8846976617820665 49 Kfl00159_0050 (at4g12620 : 434.0) Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime.; origin of replication complex 1B (ORC1B); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin recognition complex 1 (TAIR:AT4G14700.1); Has 5914 Blast hits to 5512 proteins in 383 species: Archae - 477; Bacteria - 4; Metazoa - 3209; Fungi - 806; Plants - 927; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (reliability: 866.0) & (original description: no original description) kfl00159_0050_v1.1, kfl00159_0050_v1.1 0.877198521771837 8 Kfl00118_0360 (at5g66540 : 231.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description) kfl00118_0360_v1.1 0.869214467471423 51 Kfl00177_0090 (original description: no original description) kfl00177_0090_v1.1 0.8663366975992393 68 Kfl00013_0470 (at1g53720 : 540.0) Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cisñ trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.; cyclophilin 59 (CYP59); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity, RNA binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 61647 Blast hits to 39757 proteins in 2942 species: Archae - 163; Bacteria - 9741; Metazoa - 25019; Fungi - 7217; Plants - 5688; Viruses - 226; Other Eukaryotes - 13593 (source: NCBI BLink). & (reliability: 1080.0) & (original description: no original description) kfl00013_0470_v1.1 0.8601629766052781 70 Kfl00412_0110 (at1g55870 : 145.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) kfl00412_0110_v1.1 0.8596060072124105 95 Kfl00314_0020 (at3g09250 : 129.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3). & (reliability: 258.0) & (original description: no original description) kfl00314_0020_v1.1 0.857444308435838 95 Kfl00020_0230 no hits & (original description: no original description) kfl00020_0230_v1.1 0.8447494622141227 81 Kfl00154_0170 no hits & (original description: no original description) kfl00154_0170_v1.1 0.8315606415825547 28 Kfl00390_0080 no hits & (original description: no original description) kfl00390_0080_v1.1 0.8250244817787346 81 Kfl01338_0020 no hits & (original description: no original description) kfl01338_0020_v1.1 0.8218767038475869 38 Kfl00706_g7 no hits & (original description: no original description) kfl00706_g7_v1.1 0.8189867511769939 44 Kfl00164_0020 (at4g21660 : 452.0) proline-rich spliceosome-associated (PSP) family protein; INVOLVED IN: mRNA processing; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Protein of unknown function DUF382 (InterPro:IPR007180); BEST Arabidopsis thaliana protein match is: pliceosome associated protein-related (TAIR:AT1G11520.1). & (reliability: 904.0) & (original description: no original description) kfl00164_0020_v1.1 0.812489060705892 54 Kfl00226_0010 no hits & (original description: no original description) kfl00226_0010_v1.1 0.8090678947566086 72 Kfl00070_0160 no hits & (original description: no original description) kfl00070_0160_v1.1 0.8081310273452332 96 Kfl00014_0670 no hits & (original description: no original description) kfl00014_0670_v1.1 0.8014540965085933 75