Sequence Description Alias PCC hrr Solyc11g020300 Protein TIC 40, chloroplastic (AHRD V3.3 *** TIC40_PEA) 0.9950597905177043 1 Solyc01g107330 SWIB_MDM2 domain protein 0.9945868672787301 3 Solyc12g098990 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZZ6_RICCO) 0.9943222818000272 3 Solyc09g056160 Chaperone surA (AHRD V3.3 *** A0A1D1YVG1_9ARAE) 0.9941601200102513 4 Solyc03g078080 Uridylate kinase (AHRD V3.3 *** W9QLW7_9ROSA) 0.9927687128735729 5 Solyc03g095180 Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC) 0.992254110777262 6 Solyc04g082310 TSA: Wollemia nobilis Ref_Wollemi_Transcript_29242_1275 transcribed RNA sequence (AHRD V3.3 *** A0A0C9S3G2_9SPER) 0.9908671264196842 7 Solyc02g070390 plastid transcriptionally active 12 (AHRD V3.3 *** AT2G34640.1) 0.9902079406042149 8 Solyc01g097840 MAP kinase kinase kinase 6 0.9901065980545573 11 Solyc07g064950 trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1) 0.9895798290258729 10 Solyc03g120850 Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.9884933245753443 11 Solyc12g009980 UPF0133 protein (AHRD V3.3 *** A0A0B2RBJ9_GLYSO) 0.9876508507366678 14 Solyc10g079250 DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC) 0.9875791002431044 13 Solyc05g006170 Lycopersicon esculentum Chloroplast Envelope Protein 1 0.9869668073324308 14 Solyc05g026560 ARM repeat superfamily protein (AHRD V3.3 *** AT1G23180.1) 0.9867708345527322 15 Solyc06g008220 DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) 0.9866628463914232 16 Solyc08g063080 UDP-sulfoquinovose synthase (AHRD V3.3 *** C0LIR3_SOLLC) 0.9865010236828329 17 Solyc01g096480 0.9859946151820114 18 Solyc02g079730 Thioredoxin family protein, putative (AHRD V3.3 *** G7LIP5_MEDTR) 0.9858214599753606 19 Solyc11g008940 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K217_CYNCS) 0.9857212748199112 20 Solyc11g012180 Acyl carrier protein (AHRD V3.3 *** K4D623_SOLLC) 0.9855550797078659 21 Solyc08g075970 Transmembrane protein 45B (AHRD V3.3 *** A0A151THE3_CAJCA) 0.9846691307346357 22 Solyc01g091800 rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4AZC0_SOLLC) 0.984533016196743 23 Solyc03g118500 Chaperone protein DNAj, putative (AHRD V3.3 *** B9SU82_RICCO) 0.9844995715829667 24 Solyc07g064830 Starch branching enzyme III (AHRD V3.3 *** I0B8P4_WHEAT) 0.9843649057861588 31 Solyc09g059030 Oxidoreductase, zinc-binding dehydrogenase family protein (AHRD V3.3 *** A0A061DLX9_THECC) 0.9840594120805006 26 Solyc01g111020 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T729_RICCO) 0.9839876796104742 36 Solyc12g009250 Chaperonin (AHRD V3.3 *** Q69QD5_ORYSJ) 0.9833950801364307 31 Solyc03g058960 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *-* A0A151TQB6_CAJCA) 0.9832481621586981 29 Solyc09g005700 diaminopimelate epimerase family protein (AHRD V3.3 *** AT3G53580.1) 0.983196831369846 30 Solyc03g082970 Protein phosphatase 2C (AHRD V3.3 *** M9VDY5_9AQUA) 0.9828795892225561 31 Solyc11g045190 0.9828199259907826 32 Solyc08g067840 Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GYP2_9ROSI) 0.9828052090026462 33 Solyc07g006530 Adenylosuccinate lyase (AHRD V3.3 *** K4CBC4_SOLLC) 0.9824706984831669 34 Solyc11g010900 tRNA/rRNA methyltransferase family protein (AHRD V3.3 *** D7M9L1_ARALL) 0.9822937873538438 35 Solyc02g070800 Thiamine monophosphate synthase (AHRD V3.3 *** I3SV46_MEDTR) 0.9819599840462702 36 Solyc03g025310 Sec-independent translocase protein TatA (AHRD V3.3 *** A0A0B0PZ99_GOSAR) 0.9817161462338729 37 Solyc11g067300 ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.9812565979961654 38 Solyc03g120230 MAR-binding filament-like protein 1 (AHRD V3.3 *** MFP1_SOLLC) 0.9805991259619948 39 Solyc07g049230 RmlC-like cupins superfamily protein (AHRD V3.3 *** AT2G32650.2) 0.9805153468383065 40 Solyc12g042950 Plastidic ATP/ADP-transporter (AHRD V3.3 *** TLC1_SOLTU) 0.9803608926346759 41 Solyc06g072040 CONSTANS interacting protein 2a 0.9803493328114449 42 Solyc01g108610 Cyclin-dependent kinase inhibitor (AHRD V3.3 *** A0A103YKD7_CYNCS) 0.9802849669618044 43 Solyc04g026200 Ubiquitin-like-specific protease 1D (AHRD V3.3 *-* ULP1D_ARATH) 0.98021554549682 44 Solyc03g123880 Glutamyl-tRNA reductase binding protein (AHRD V3.3 *** E9N732_TOBAC) 0.9801087263846128 45 Solyc10g007840 Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial (AHRD V3.3 *** K4CXW3_SOLLC) 0.9799986024073576 46 Solyc04g050540 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9S7Q8_RICCO) 0.9799610713925161 47 Solyc11g010910 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT4G29860.1) 0.9799004329559707 48 Solyc09g055940 Sodium Bile acid symporter family (AHRD V3.3 *** AT3G25410.1) 0.979865605809825 49 Solyc04g080900 GTPase obg (AHRD V3.3 *** A0A0B0PU27_GOSAR) 0.9796440941964886 50 Solyc01g067070 Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G48970.1) 0.9788773213648765 51 Solyc05g020020 CONSTANS-like zinc finger protein (AHRD V3.3 *** A0A023GS52_SOYBN) 0.9787631654418366 52 Solyc01g058190 30S ribosomal protein S6 (AHRD V3.3 *** W9RJT9_9ROSA) 0.9786394312394315 53 Solyc03g111050 CONSTANS interacting protein 5 0.9781961222233813 54 Solyc11g020870 Metal-dependent protein hydrolase (AHRD V3.3 *** AT5G41970.1) 0.9780748398255521 58 Solyc03g095760 Rhodanese-like domain-containing protein (AHRD V3.3 *** A0A124SGQ2_CYNCS) 0.978027303393508 56 Solyc04g009310 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BP87_SOLLC) 0.9779485130146189 57 Solyc07g005870 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** AT4G30720.1) 0.9777958457656107 58 Solyc02g049070 4-coumarate:CoA ligase (AHRD V3.3 --* O81139_POPTM) 0.9773693590096807 59 Solyc12g096660 Type II inositol 5-phosphatase, putative (AHRD V3.3 *** B9RM01_RICCO) 0.9770846953809047 60 Solyc06g071180 Dynein light chain (AHRD V3.3 *** W9QNT0_9ROSA) 0.9770307154871832 61 Solyc02g091970 SlBCAT3 0.9769675199260914 62 Solyc07g005860 QWRF motif protein (DUF566) (AHRD V3.3 *** AT4G30710.3) 0.9769514856488105 63 Solyc01g111430 LOW QUALITY:Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061DY90_THECC) 0.9768697757277911 64 Solyc04g074630 Seryl-tRNA synthetase (AHRD V3.3 *** AT1G11870.2) 0.9767321077915347 65 Solyc03g081300 Mitochondrial transcription termination factor-related family protein (AHRD V3.3 *** B9IDI0_POPTR) 0.9766147918830393 66 Solyc11g045270 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *-* AT3G11890.7) 0.9765767060147578 67 Solyc11g017250 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** K4D6M8_SOLLC) 0.9765658123495617 68 Solyc01g079650 CTP synthase (AHRD V3.3 *** A0A0V0IPL0_SOLCH) 0.9764269551105839 69 Solyc02g085140 U-box domain-containing family protein (AHRD V3.3 *** U5GHQ7_POPTR) 0.9763802373594943 70 Solyc05g009310 CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN) 0.9763097665007338 80 Solyc08g042080 Multiple chloroplast division site 1, putative (AHRD V3.3 *** A0A061FEL2_THECC) 0.9761181803304014 72 Solyc08g068920 Protein kinase superfamily protein (AHRD V3.3 *** AT5G24970.3) 0.9759397543319505 73 Solyc10g055390 Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A0K9P7P6_ZOSMR) 0.9758605103950911 74 Solyc08g065870 EARLY FLOWERING 3 (AHRD V3.3 *** A0A088PY80_9ROSI) 0.9757146902492663 83 Solyc12g036410 Elongation factor 1-alpha, putative (AHRD V3.3 *** B9SPP6_RICCO) 0.9756878482743038 80 Solyc01g103440 Phosphoribosylamine-glycine ligase (AHRD V3.3 *** G7K3Z1_MEDTR) 0.9756583799351672 77 Solyc12g044400 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9R6A6_9ROSA) 0.975476391247023 79 Solyc04g080170 Kinase, putative (AHRD V3.3 *** B9R7R7_RICCO) 0.9752263611711235 80 Solyc12g019310 Acetolactate synthase, small subunit (AHRD V3.3 *** A0A118K2Y2_CYNCS) 0.9750599052623182 81 Solyc12g035170 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HW10_POPTR) 0.9749687491598895 82 Solyc07g008530 Tyrosine--tRNA ligase (AHRD V3.3 *** K4CBX2_SOLLC) 0.9749644559654489 83 Solyc10g081420 Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR) 0.9749090053087153 84 Solyc01g006450 Enoyl reductase (AHRD V3.3 *** P93062_BRANA) 0.9746656934837604 85 Solyc11g040390 Aspartokinase-homoserine dehydrogenase (AHRD V3.3 *** O65027_SOYBN) 0.9746051843968635 86 Solyc09g005710 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061ES09_THECC) 0.9745383731486912 87 Solyc08g077490 pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *-* AT4G17140.3) 0.9745083217004818 88 Solyc02g031770 ATP synthase mitochondrial F1 complex assembly factor 1 (AHRD V3.3 *** W9RFR7_9ROSA) 0.9743671237181042 89 Solyc08g081890 ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 0.9742976285849452 90 Solyc02g085670 Major facilitator superfamily transporter (AHRD V3.3 *** A0A0K9PQR0_ZOSMR) 0.9742730167386333 91 Solyc09g011830 Transcription antitermination nusg (AHRD V3.3 *** A0A0B0P8C3_GOSAR) 0.9741781437988379 92 Solyc12g019960 Telomerase activating protein Est1 (AHRD V3.3 *** A0A072UH06_MEDTR) 0.9740886113484849 95 Solyc06g008530 Myosin XI, putative (AHRD V3.3 *** B9S7I4_RICCO) 0.9739994375709303 94 Solyc11g012890 Auxin efflux carrier component (AHRD V3.3 --* A0A075IGY3_9SPER) 0.9738803620036351 95 Solyc07g055980 Haloacid dehalogenase superfamily protein (AHRD V3.3 *** I7AYD7_PHAVU) 0.9736508609134144 96 Solyc09g025260 SAP-like protein BP-73 (AHRD V3.3 *** W9QWA9_9ROSA) 0.9735684960290195 97 Solyc10g045490 LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT5G62990.1) 0.9734817530158612 99 Solyc06g061130 Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1) 0.9734349438934023 100