Sequence Description Alias PCC hrr Kfl00064_0250 (at2g21150 : 342.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (reliability: 684.0) & (original description: no original description) kfl00064_0250_v1.1, kfl00064_0250_v1.1 0.8377402992587483 1 Kfl00086_0160 (at1g60900 : 89.7) U2 snRNP auxilliary factor, large subunit, splicing factor; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 snRNP auxilliary factor, large subunit, splicing factor (InterPro:IPR006529); BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor (TAIR:AT4G36690.4); Has 95343 Blast hits to 42389 proteins in 1915 species: Archae - 82; Bacteria - 12197; Metazoa - 47091; Fungi - 9469; Plants - 8106; Viruses - 663; Other Eukaryotes - 17735 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) kfl00086_0160_v1.1 0.7994311899415563 51 Kfl00131_0010 no hits & (original description: no original description) kfl00131_0010_v1.1 0.7760923665941695 43 Kfl00210_0150 (q96453|1433d_soybn : 317.0) 14-3-3-like protein D (SGF14D) - Glycine max (Soybean) & (at1g26480 : 298.0) 14-3-3 protein GF14iota (grf12); general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 596.0) & (original description: no original description) kfl00210_0150_v1.1 0.7714054398772301 35 Kfl00029_0340 (at1g58025 : 91.7) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (reliability: 183.4) & (original description: no original description) kfl00029_0340_v1.1 0.7643300056741541 16 Kfl00211_0200 no hits & (original description: no original description) kfl00211_0200_v1.1 0.7536454042631581 12 Kfl00399_0030 (q8s1z1|utp11_orysa : 244.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 221.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description) kfl00399_0030_v1.1 0.7518044515669148 12 Kfl00065_0130 (at3g49601 : 108.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) kfl00065_0130_v1.1 0.7501755175670619 85 Kfl00059_0360 (at1g32130 : 244.0) The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.; IWS1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of RNA elongation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT4G19000.1). & (reliability: 488.0) & (original description: no original description) kfl00059_0360_v1.1 0.7426884020721943 67 Kfl00159_0140 (at5g58020 : 241.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description) kfl00159_0140_v1.1 0.7371518522256784 94 Kfl00363_0110 (at1g33520 : 177.0) Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;; modifier of snc1, 2 (MOS2); CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT4G25020.1); Has 453 Blast hits to 441 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 80; Plants - 100; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) kfl00363_0110_v1.1 0.7300515321925322 100 Kfl00211_0210 no hits & (original description: no original description) kfl00211_0210_v1.1 0.727375761927501 58 Kfl00126_0180 (at5g61150 : 184.0) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) kfl00126_0180_v1.1 0.7219415786200132 73 Kfl00335_0110 no hits & (original description: no original description) kfl00335_0110_v1.1 0.720793650696511 54 Kfl00179_0100 no hits & (original description: no original description) kfl00179_0100_v1.1 0.7080539928011775 25 Kfl00402_0090 (at3g47610 : 200.0) transcription regulators;zinc ion binding; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2HC5-type (InterPro:IPR009349); Has 342 Blast hits to 320 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) kfl00402_0090_v1.1 0.7072983974971728 90 Kfl00135_0260 (at2g25360 : 80.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: sperm cell, pollen tube; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 2754 Blast hits to 2742 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1075; Fungi - 582; Plants - 680; Viruses - 2; Other Eukaryotes - 415 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) kfl00135_0260_v1.1 0.7060316878874733 49 Kfl00232_0220 no hits & (original description: no original description) kfl00232_0220_v1.1 0.7020519035153805 39 Kfl00816_0050 no hits & (original description: no original description) kfl00816_0050_v1.1 0.7020204767309238 32 Kfl00108_0150 no hits & (original description: no original description) kfl00108_0150_v1.1 0.6938275732228598 27 Kfl00099_0200 (at3g04890 : 150.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) kfl00099_0200_v1.1 0.6826923748690423 40 Kfl00269_0060 no hits & (original description: no original description) kfl00269_0060_v1.1 0.6776605644070369 33 Kfl00637_0030 no hits & (original description: no original description) kfl00637_0030_v1.1 0.6471456249319433 81 Kfl00106_0030 (p50567|h2a_chlre : 174.0) Histone H2A - Chlamydomonas reinhardtii & (at3g20670 : 169.0) Encodes HTA13, a histone H2A protein.; histone H2A 13 (HTA13); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 10 (TAIR:AT1G51060.1); Has 3900 Blast hits to 3895 proteins in 360 species: Archae - 0; Bacteria - 0; Metazoa - 2556; Fungi - 297; Plants - 612; Viruses - 4; Other Eukaryotes - 431 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description) kfl00106_0030_v1.1 0.6417264618730695 59 Kfl00180_0090 (at5g25760 : 244.0) mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin4 (PEX4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10357 Blast hits to 10353 proteins in 397 species: Archae - 0; Bacteria - 2; Metazoa - 4640; Fungi - 2157; Plants - 1900; Viruses - 24; Other Eukaryotes - 1634 (source: NCBI BLink). & (p35130|ubc2_medsa : 112.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 488.0) & (original description: no original description) kfl00180_0090_v1.1 0.6412055897222474 60 Kfl00656_0020 (at5g63880 : 155.0) VPS20.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 20.2 (TAIR:AT5G09260.1). & (reliability: 298.0) & (original description: no original description) kfl00656_0020_v1.1, kfl00656_0020_v1.1 0.6405538859647744 75 Kfl00483_0010 (at5g24650 : 191.0) Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: chloroplast, plasma membrane, vacuole, mitochondrial inner membrane presequence translocase complex, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sterile alpha motif, type 1 (InterPro:IPR021129), Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT3G49560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description) kfl00483_0010_v1.1 0.6370269181181814 87 Kfl01635_0010 no hits & (original description: no original description) kfl01635_0010_v1.1 0.6340617759008649 74 Kfl00106_g14 (at5g59970 : 160.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 160.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 320.0) & (original description: no original description) kfl00106_g14_v1.1 0.6333492999509964 76 Kfl00546_0050 no hits & (original description: no original description) kfl00546_0050_v1.1 0.6238114138944569 86 Kfl00262_0210 (at4g08310 : 104.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins in 1618 species: Archae - 142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other Eukaryotes - 15245 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) kfl00262_0210_v1.1 0.6215031209507481 90 Kfl00324_0050 no hits & (original description: no original description) kfl00324_0050_v1.1 0.6207315943949578 90 Kfl00348_0100 (at2g35635 : 236.0) encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions.; ubiquitin 7 (UBQ7); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: related to ubiquitin 1 (TAIR:AT1G31340.1); Has 16104 Blast hits to 7343 proteins in 724 species: Archae - 0; Bacteria - 35; Metazoa - 7305; Fungi - 1873; Plants - 3622; Viruses - 336; Other Eukaryotes - 2933 (source: NCBI BLink). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 472.0) & (original description: no original description) kfl00348_0100_v1.1, kfl00348_0100_v1.1 0.6148024623650175 98