Sequence Description Alias PCC hrr Solyc01g096480 0.9946325496080979 1 Solyc07g005870 FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** AT4G30720.1) 0.9939040178180436 2 Solyc02g091970 SlBCAT3 0.9926329660515447 4 Solyc03g111050 CONSTANS interacting protein 5 0.9913694793516745 5 Solyc11g008940 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K217_CYNCS) 0.990927251691675 5 Solyc04g074630 Seryl-tRNA synthetase (AHRD V3.3 *** AT1G11870.2) 0.9894136025821064 6 Solyc01g103440 Phosphoribosylamine-glycine ligase (AHRD V3.3 *** G7K3Z1_MEDTR) 0.9889677142481718 7 Solyc02g070390 plastid transcriptionally active 12 (AHRD V3.3 *** AT2G34640.1) 0.9888880956375726 10 Solyc01g107330 SWIB_MDM2 domain protein 0.9888745534996172 15 Solyc05g006170 Lycopersicon esculentum Chloroplast Envelope Protein 1 0.9887572153490458 10 Solyc11g020300 Protein TIC 40, chloroplastic (AHRD V3.3 *** TIC40_PEA) 0.9881548241634284 11 Solyc03g120850 Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.9878292666530839 12 Solyc03g095760 Rhodanese-like domain-containing protein (AHRD V3.3 *** A0A124SGQ2_CYNCS) 0.9875558693449102 13 Solyc03g098640 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** AT5G19750.1) 0.9867978725427514 14 Solyc05g055350 Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR) 0.9866628463914232 16 Solyc07g049230 RmlC-like cupins superfamily protein (AHRD V3.3 *** AT2G32650.2) 0.9863767614992964 16 Solyc04g050540 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9S7Q8_RICCO) 0.985943487634003 17 Solyc03g095180 Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC) 0.9857857309418985 19 Solyc01g058190 30S ribosomal protein S6 (AHRD V3.3 *** W9RJT9_9ROSA) 0.9856851709637006 19 Solyc12g098990 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZZ6_RICCO) 0.984923425333297 23 Solyc07g006530 Adenylosuccinate lyase (AHRD V3.3 *** K4CBC4_SOLLC) 0.9831417578877761 21 Solyc08g081080 structural maintenance of chromosomes-like protein, putative (DUF3531) (AHRD V3.3 *** AT5G08400.2) 0.9829614319214502 22 Solyc10g008600 embryo defective 1923 (AHRD V3.3 *** AT4G28210.1) 0.9827292841014887 23 Solyc01g096010 embryo defective 1703 (AHRD V3.3 *** AT3G61780.1) 0.9825720788954111 33 Solyc09g056160 Chaperone surA (AHRD V3.3 *** A0A1D1YVG1_9ARAE) 0.9819917941235942 39 Solyc11g067300 ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.981673303276654 31 Solyc03g118680 Zinc finger protein (AHRD V3.3 *** W9RJ16_9ROSA) 0.9814742546938086 27 Solyc10g079250 DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC) 0.9805869739545713 30 Solyc01g081300 Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (AHRD V3.3 *** PUR7_ARATH) 0.9802279166279537 29 Solyc09g005700 diaminopimelate epimerase family protein (AHRD V3.3 *** AT3G53580.1) 0.9799646926197184 35 Solyc08g081890 ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 0.9798432596928496 31 Solyc08g075160 Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A0B2PXS6_GLYSO) 0.9797756835663409 32 Solyc02g023970 Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC) 0.9797229053176972 33 Solyc01g096900 DNA GYRASE A (AHRD V3.3 *** AT3G10690.1) 0.9795769100203525 34 Solyc02g079000 ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7LB10_MEDTR) 0.9794417615741596 40 Solyc01g097840 MAP kinase kinase kinase 6 0.9793313975397641 70 Solyc10g080040 Ribonuclease III family protein (AHRD V3.3 *-* AT4G37510.1) 0.977903232152939 37 Solyc02g049070 4-coumarate:CoA ligase (AHRD V3.3 --* O81139_POPTM) 0.9777818679708592 38 Solyc09g064790 pale cress protein (PAC) (AHRD V3.3 *** AT2G48120.1) 0.9775357470694498 39 Solyc04g063360 ATP-dependent zinc metalloprotease FTSH (AHRD V3.3 *** W9S040_9ROSA) 0.9771474510711424 44 Solyc04g026200 Ubiquitin-like-specific protease 1D (AHRD V3.3 *-* ULP1D_ARATH) 0.9770212027702139 41 Solyc10g079290 Outer envelope protein 80, chloroplastic (AHRD V3.3 *** OEP80_ARATH) 0.9770013478788596 42 Solyc03g120230 MAR-binding filament-like protein 1 (AHRD V3.3 *** MFP1_SOLLC) 0.9769709951150206 43 Solyc01g067070 Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G48970.1) 0.9768749807042035 44 Solyc11g010910 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT4G29860.1) 0.976814852076574 56 Solyc09g055940 Sodium Bile acid symporter family (AHRD V3.3 *** AT3G25410.1) 0.9766113226881987 46 Solyc03g078080 Uridylate kinase (AHRD V3.3 *** W9QLW7_9ROSA) 0.976461946063818 61 Solyc10g045310 Oxidoreductase/ transition metal ion binding protein (AHRD V3.3 *** D7MCM0_ARALL) 0.9764370727755133 48 Solyc02g081920 plastid transcriptionally active 14 (AHRD V3.3 *** AT4G20130.1) 0.9763041627993396 70 Solyc02g062350 DnaJ, mitochondrial (AHRD V3.3 *** A0A0B0PT99_GOSAR) 0.9760772923912263 50 Solyc01g081150 DNA-directed RNA polymerases I, II, and III subunit rpabc3 (AHRD V3.3 *** W9RLU0_9ROSA) 0.9760452962188393 51 Solyc03g118690 Translocon at the outer membrane of chloroplasts 64 (AHRD V3.3 *** TOC64_PEA) 0.9758068602371288 52 Solyc04g082310 TSA: Wollemia nobilis Ref_Wollemi_Transcript_29242_1275 transcribed RNA sequence (AHRD V3.3 *** A0A0C9S3G2_9SPER) 0.9755620929698355 57 Solyc11g020870 Metal-dependent protein hydrolase (AHRD V3.3 *** AT5G41970.1) 0.9755366756958095 76 Solyc06g075340 Carbamoyl-phosphate synthase large chain (AHRD V3.3 *** A0A0B0PI12_GOSAR) 0.9753074674424427 55 Solyc10g008140 Prohibitin, putative (AHRD V3.3 *** B9RVS2_RICCO) 0.9752702738972789 56 Solyc07g064830 Starch branching enzyme III (AHRD V3.3 *** I0B8P4_WHEAT) 0.9752093762326417 100 Solyc07g064950 trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1) 0.9751464717595958 68 Solyc11g012180 Acyl carrier protein (AHRD V3.3 *** K4D623_SOLLC) 0.9749231152457369 59 Solyc02g032970 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0B0PX39_GOSAR) 0.9745868709145336 60 Solyc01g006450 Enoyl reductase (AHRD V3.3 *** P93062_BRANA) 0.9745290622267502 61 Solyc10g081420 Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR) 0.9743684208285119 62 Solyc04g005630 Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G02990.2) 0.9740314771754395 63 Solyc09g059030 Oxidoreductase, zinc-binding dehydrogenase family protein (AHRD V3.3 *** A0A061DLX9_THECC) 0.9740252021880784 93 Solyc10g045490 LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT5G62990.1) 0.9737967300043695 88 Solyc05g012270 Argininosuccinate synthase (AHRD V3.3 *** K4BXV0_SOLLC) 0.9737374782688014 66 Solyc04g009940 Chloroplast J-like domain 1 (AHRD V3.3 *** AT1G08640.1) 0.9735610476369664 67 Solyc06g082800 Mitochondrial import receptor subunit tom40, putative (AHRD V3.3 *** B9RGH8_RICCO) 0.9735571783135466 68 Solyc04g011700 Mitochondrial transcription termination factor family protein, putative (AHRD V3.3 *** A0A061DIZ3_THECC) 0.9734493703632453 69 Solyc01g089870 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9GP78_POPTR) 0.9733626778411418 70 Solyc04g072770 E3 ubiquitin-protein ligase RMA1H1 (AHRD V3.3 --* RMA1_CAPAN) 0.9733035834765738 71 Solyc12g009250 Chaperonin (AHRD V3.3 *** Q69QD5_ORYSJ) 0.9726304115194201 89 Solyc12g035170 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HW10_POPTR) 0.9726093309964988 73 Solyc02g032960 0.9724613693174923 74 Solyc02g014870 Thioredoxin-like protein 4A (AHRD V3.3 *** A0A151RDS9_CAJCA) 0.971980469446108 75 Solyc05g006130 RNA helicase DEAD17 0.9718653214183784 76 Solyc02g080320 Pseudouridine synthase family protein (AHRD V3.3 *** AT4G21770.1) 0.9716509313418644 77 Solyc11g019930 RING/U-box superfamily protein (AHRD V3.3 *** AT1G35625.1) 0.9716181560608885 78 Solyc09g075000 Transducin/WD40 repeat protein (AHRD V3.3 *** G7LCS5_MEDTR) 0.9716168356655387 79 Solyc02g085140 U-box domain-containing family protein (AHRD V3.3 *** U5GHQ7_POPTR) 0.9711528680582852 84 Solyc02g069780 SIT4 phosphatase-associated family protein (AHRD V3.3 *** AT1G30470.1) 0.970183014727702 82 Solyc11g045270 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *-* AT3G11890.7) 0.9701433587107521 83 Solyc07g008350 voltage-dependent anion channel protein 0.969906931032473 85 Solyc01g073910 homeobox leucine zipper protein (AHRD V3.3 *** AT5G06710.1) 0.969898077937872 86 Solyc03g118500 Chaperone protein DNAj, putative (AHRD V3.3 *** B9SU82_RICCO) 0.9694455702707574 94 Solyc02g031970 50S ribosomal protein L7/L12 (AHRD V3.3 *** A0A0B2SQD1_GLYSO) 0.9693916789442603 89 Solyc08g080240 NADH dehydrogenase 1 alpha subcomplex subunit 8 (AHRD V3.3 *** A0A0K9PKB1_ZOSMR) 0.9683287634944687 95 Solyc03g031420 LOW QUALITY:Molybdenum cofactor sulfurase (AHRD V3.3 *** A0A0B2Q7C8_GLYSO) 0.968208495185933 94 Solyc04g080900 GTPase obg (AHRD V3.3 *** A0A0B0PU27_GOSAR) 0.9680857629359048 95 Solyc05g054110 Rho GDP-dissociation inhibitor 1 family protein (AHRD V3.3 *** B9IH83_POPTR) 0.9678437587812344 98