Sequence Description Alias PCC hrr Solyc08g080120 Homeobox protein knotted-1, putative (AHRD V3.3 *** B9RC00_RICCO) 0.989773974444133 2 Solyc04g054270 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T1C7_RICCO) 0.9864439961087512 7 Solyc01g095680 Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *-* A0A061DSR6_THECC) 0.9864330518962504 8 Solyc11g070020 Disease resistance protein (AHRD V3.3 *-* A0A068EUA5_SOLLC) 0.9851107077516751 5 Solyc12g056740 RNA helicase DEAD39 0.9829512199240268 18 Solyc05g014050 Inner membrane protein (AHRD V3.3 *** S8C850_9LAMI) 0.9821782046251314 10 Solyc06g035600 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061FZU0_THECC) 0.9818580239160717 18 Solyc12g096650 Vacuolar protein sorting-associated protein 20 homolog 1 (AHRD V3.3 *** VP201_ARATH) 0.9817018497802256 8 Solyc09g066290 Kinesin light chain, putative (AHRD V3.3 *** B9T299_RICCO) 0.9811125654302746 9 Solyc02g081910 DNA topoisomerase (AHRD V3.3 *** K4BA61_SOLLC) 0.9808389880659718 13 Solyc04g015950 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H9T6_POPTR) 0.9805187303763014 11 Solyc09g074100 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (AHRD V3.3 *** AT1G51310.1) 0.9796500063534928 12 Solyc11g010350 Glucan 1,3-beta-glucosidase (AHRD V3.3 *** A0A151U914_CAJCA) 0.978724964998416 13 Solyc01g095740 RNA helicase DEAD5 0.9786293363344155 41 Solyc04g049630 Dipeptidyl peptidase family member 6 (AHRD V3.3 *** A0A0B0PQJ9_GOSAR) 0.9778597621809626 66 Solyc02g091640 endoribonuclease E-like protein (AHRD V3.3 *** AT4G37920.1) 0.9767295014296125 48 Solyc01g087690 Sigma factor (AHRD V3.3 *** A0A0G2STQ4_9ROSI) 0.9762690110810076 17 Solyc10g086150 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT2G37220.1) 0.9752565491622345 35 Solyc04g009730 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RPX5_RICCO) 0.9749290559727565 19 Solyc03g114130 LOW QUALITY:NHL domain-containing protein, putative (AHRD V3.3 *-* A0A061EBN2_THECC) 0.9748890319819759 31 Solyc08g081280 CDK activating kinase (AHRD V3.3 *** A7M6H0_TOBAC) 0.9747532796480133 21 Solyc11g008130 nuclear pore complex protein-like protein (AHRD V3.3 *-* AT5G05680.1) 0.9743190471110359 71 Solyc01g005380 Unknown protein (AHRD V3.3 ) 0.9742097862218069 62 Solyc08g008670 Phosphomannomutase (AHRD V3.3 *** PMM_SOLLC) 0.974193283650143 39 Solyc06g068290 Adenylate cyclase (AHRD V3.3 *** E1AQY2_IPONI) 0.9740700621504983 25 Solyc07g065050 Cell division protein FtsZ-1-like protein (AHRD V3.3 *** W9RBJ2_9ROSA) 0.9740268774628232 57 Solyc01g089870 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9GP78_POPTR) 0.9738111979339017 36 Solyc11g008110 0.9737609989747515 28 Solyc03g121120 DNA repair protein RadA-like protein (AHRD V3.3 *** AT5G50340.3) 0.9734952955295431 39 Solyc02g087250 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A0B0PGC2_GOSAR) 0.9727232418290533 66 Solyc05g006460 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S5H2_RICCO) 0.97268537941229 67 Solyc09g011410 Plastid RNA-binding protein 1 (AHRD V3.3 *** D9J062_NICBE) 0.9726767437518778 32 Solyc03g120680 Glyoxylate reductase (AHRD V3.3 *** A0A1D1YDH1_9ARAE) 0.9724881668745602 33 Solyc02g080950 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XCX1_CYNCS) 0.9724504875042677 69 Solyc11g062430 COP9 signalosome complex subunit 2 (AHRD V3.3 *** W9QZI3_9ROSA) 0.9723443568217812 60 Solyc04g076740 Protein TIC 20, chloroplastic (AHRD V3.3 *** A0A0B2STH9_GLYSO) 0.9721531022794714 95 Solyc08g023500 Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** AT1G30300.4) 0.9714994532792258 89 Solyc04g058190 PHD finger family protein (AHRD V3.3 *** B9GTY7_POPTR) 0.9713390979759149 57 Solyc09g011850 Fructokinase, putative (AHRD V3.3 *** B9SPF8_RICCO) 0.9710726587500659 98 Solyc05g050610 0.9706244339616865 44 Solyc03g005690 Cysteine-rich repeat secretory protein 3 (AHRD V3.3 *** A0A0B2QTT4_GLYSO) 0.9705983562482027 83 Solyc04g045590 Alpha-ketoglutarate-dependent dioxygenase alkB (AHRD V3.3 *** G5DX61_SILLA) 0.9703210790679131 46 Solyc08g077140 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A103XEM3_CYNCS) 0.9701915958585315 47 Solyc10g081140 LOW QUALITY:Protein kinase family protein (AHRD V3.3 *** Q9SLM4_ARATH) 0.9701575406315247 48 Solyc04g079150 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HVN1_POPTR) 0.969919270526322 49 Solyc07g005240 FAD-dependent oxidoreductase family protein (AHRD V3.3 *** AT2G22650.3) 0.9698999094388194 50 Solyc02g072230 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G45760.1) 0.9696247626037876 84 Solyc11g068470 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XGK8_CYNCS) 0.9692783163141155 53 Solyc10g045310 Oxidoreductase/ transition metal ion binding protein (AHRD V3.3 *** D7MCM0_ARALL) 0.9690849840844694 77 Solyc01g108650 LOW QUALITY:embryo defective 1273 (AHRD V3.3 *** AT1G49510.3) 0.9686501635341015 56 Solyc12g088730 50S ribosomal L4 (AHRD V3.3 *** A0A0B0Q1P8_GOSAR) 0.9686416552723811 57 Solyc02g024000 WPP domain-associated protein (AHRD V3.3 *** WAP_SOLLC) 0.9681825609399778 58 Solyc12g099110 30S ribosomal protein S1 0.9680143517308917 62 Solyc06g063170 Glutamate receptor (AHRD V3.3 *** K4C748_SOLLC) 0.9678825434666686 66 Solyc01g098630 Mitochondrial inner membrane translocase subunit Tim44 (AHRD V3.3 *** A0A0K9P2C5_ZOSMR) 0.9678057695594379 61 Solyc06g083380 Acyl-[acyl-carrier-protein] hydrolase (AHRD V3.3 *** K4CAJ3_SOLLC) 0.9676381181801929 64 Solyc12g014280 CRS1/YhbY (CRM) domain protein (AHRD V3.3 *** A0A072UMR2_MEDTR) 0.9674283689665906 65 Solyc07g064100 LOW QUALITY:Chlororespiratory reduction 41 (AHRD V3.3 *** A0A0F7J577_9ROSI) 0.96737690169746 87 Solyc01g008290 Dihydroorotate dehydrogenase (quinone), mitochondrial (AHRD V3.3 *** K4AT27_SOLLC) 0.967307332968155 88 Solyc02g076700 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y3C8_CYNCS) 0.9672084562958502 69 Solyc05g032770 PHD finger alfin-like protein (AHRD V3.3 *** A0A072VDQ0_MEDTR) 0.9671581854540618 78 Solyc03g117080 Mitochondrial glycoprotein family protein (AHRD V3.3 *** AT1G15870.1) 0.9666612657403159 73 Solyc07g014640 Galactokinase, putative (AHRD V3.3 *** B9RKW5_RICCO) 0.9665216210927309 75 Solyc03g121030 MMS19 nucleotide excision repair (AHRD V3.3 *** A0A0B0MQY6_GOSAR) 0.9664033502160151 96 Solyc09g059570 B-cell receptor-associated protein 31-like (AHRD V3.3 *** A0A061DME9_THECC) 0.9658826672984477 80 Solyc06g034110 Tomato acid phosphatase 0.9655502630682461 97 Solyc04g039620 0.9655274248498069 83 Solyc07g062880 Protein yippee-like (AHRD V3.3 *** K4CGX1_SOLLC) 0.965328668039061 84 Solyc11g068680 ATP synthase protein I (AHRD V3.3 *** A0A1D1ZEB6_9ARAE) 0.9650938446013572 92 Solyc01g111050 Protein COBRA, putative (AHRD V3.3 *** B9STE2_RICCO) 0.964992873847429 93 Solyc01g056720 small basic intrinsic protein 2.1 0.9648238202024696 90 Solyc07g005850 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A061GNM9_THECC) 0.9645800268066825 92 Solyc06g069670 Formin-like protein (AHRD V3.3 *** K4C8E0_SOLLC) 0.9645190092271605 93 Solyc05g052160 Translocase of chloroplast (AHRD V3.3 *** K4C1P7_SOLLC) 0.9643873609821303 95 Solyc12g017280 ARM repeat superfamily protein (AHRD V3.3 *** AT1G79190.1) 0.9639187580095554 99