Sequence Description Alias PCC hrr MA_8232g0010 (at4g38495 : 97.4) CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 194.8) & (original description: no original description) 0.6996354938243657 7 MA_72639g0010 (at1g15340 : 96.7) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 10 (MBD10); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 11 (TAIR:AT3G15790.1). & (reliability: 193.4) & (original description: no original description) 0.688558429906727 85 MA_4188g0010 (at3g18480 : 320.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 640.0) & (original description: no original description) 0.6757109748728932 14 MA_10427465g0010 (at1g70480 : 279.0) Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description) 0.644476500448128 57 MA_7261g0010 (at3g12720 : 147.0) Member of the R2R3 factor gene family.; myb domain protein 67 (MYB67); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 50 (TAIR:AT1G57560.1); Has 8912 Blast hits to 8278 proteins in 476 species: Archae - 0; Bacteria - 2; Metazoa - 680; Fungi - 532; Plants - 5859; Viruses - 3; Other Eukaryotes - 1836 (source: NCBI BLink). & (p20027|myb3_horvu : 108.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 294.0) & (original description: no original description) 0.6425993793138816 6 MA_72555g0010 (at3g51880 : 125.0) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.; high mobility group B1 (HMGB1); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B3 (TAIR:AT1G20696.3). & (p40619|hmgl_iponi : 124.0) HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 250.0) & (original description: no original description) 0.6327938360566684 9 MA_24116g0010 (at1g32450 : 662.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 1324.0) & (original description: no original description) 0.6007425202976198 15 MA_10430620g0010 (at1g75250 : 104.0) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.5893020836549846 37 MA_10436470g0020 (p46297|rs23_fraan : 282.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (at5g02960 : 272.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (reliability: 544.0) & (original description: no original description) 0.5750378410001352 73 MA_108340g0010 (at5g59460 : 89.4) scarecrow-like transcription factor 11 (SCL11); CONTAINS InterPro DOMAIN/s: M-phase phosphoprotein 6 (InterPro:IPR019324); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.5635268287300336 40 MA_260032g0010 no hits & (original description: no original description) 0.5492575183197591 52 MA_8861171g0010 (q43636|trxh_ricco : 131.0) Thioredoxin H-type (TRX-H) - Ricinus communis (Castor bean) & (at3g51030 : 130.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.5478021832846941 53 MA_10429422g0020 (at2g44060 : 250.0) Late embryogenesis abundant protein, group 2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion, response to desiccation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT1G01470.1); Has 294 Blast hits to 286 proteins in 78 species: Archae - 4; Bacteria - 52; Metazoa - 0; Fungi - 0; Plants - 235; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description) 0.544075690172055 56 MA_180659g0010 no hits & (original description: no original description) 0.5402114227367072 59 MA_10432661g0010 (at1g53720 : 110.0) Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cisñ trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.; cyclophilin 59 (CYP59); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity, RNA binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 61647 Blast hits to 39757 proteins in 2942 species: Archae - 163; Bacteria - 9741; Metazoa - 25019; Fungi - 7217; Plants - 5688; Viruses - 226; Other Eukaryotes - 13593 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.5336011030033964 65 MA_959201g0010 (at4g13010 : 306.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 34133 Blast hits to 33976 proteins in 2527 species: Archae - 549; Bacteria - 21108; Metazoa - 1143; Fungi - 3531; Plants - 1393; Viruses - 3; Other Eukaryotes - 6406 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 284.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 612.0) & (original description: no original description) 0.5238216644797334 75 MA_10427861g0010 (at2g19490 : 324.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 648.0) & (original description: no original description) 0.5215998429185906 79 MA_608857g0010 (at5g10350 : 87.0) RNA-binding (RRM/RBD/RNP motifs) family protein; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (reliability: 174.0) & (original description: no original description) 0.5151617892542643 86 MA_9735405g0010 (at2g40660 : 172.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (q9zts1|sym_orysa : 108.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 344.0) & (original description: no original description) 0.504872409160925 98