Sequence Description Alias PCC hrr Solyc11g012670 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JXR5_CYNCS) 0.9902908230709924 1 Solyc11g012640 LOW QUALITY:Peroxiredoxin Q, chloroplastic (AHRD V3.3 *-* M8CFS7_AEGTA) 0.9881603958965192 6 Solyc03g007110 ATP-dependent clp protease, putative (AHRD V3.3 *** B9R9N1_RICCO) 0.9873036188969581 13 Solyc04g080190 Outer envelope pore protein 24B, chloroplastic (AHRD V3.3 *** OP24B_ARATH) 0.9867937294157494 4 Solyc05g006110 Serine/Threonine-kinase (AHRD V3.3 *** AT1G10522.2) 0.9851381032951284 8 Solyc04g074750 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT4G09040.1) 0.9827473898278298 16 Solyc02g085520 Adenylosuccinate synthetase, chloroplastic (AHRD V3.3 *** PURA_SOLBU) 0.9826201753326559 7 Solyc08g007300 myb family transcription factor (AHRD V3.3 *-* AT5G41020.1) 0.9821109674237976 12 Solyc12g096590 6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** K4DHD2_SOLLC) 0.9817441351704318 11 Solyc08g042050 RNA helicase DEAD25 0.9809220654060958 37 Solyc12g013890 embryo defective 2737 (AHRD V3.3 *** AT5G53860.2) 0.9808923257762308 39 Solyc04g080900 GTPase obg (AHRD V3.3 *** A0A0B0PU27_GOSAR) 0.9795530935744581 22 Solyc03g113780 Pyridoxamine 5-phosphate oxidase, putative (AHRD V3.3 *** B9RJT5_RICCO) 0.9793917611709276 25 Solyc03g025310 Sec-independent translocase protein TatA (AHRD V3.3 *** A0A0B0PZ99_GOSAR) 0.9791354011833637 34 Solyc05g050720 Preprotein translocase subunit SECE1 (AHRD V3.3 *** A0A1D1Z4R7_9ARAE) 0.9783690854663525 24 Solyc11g006680 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RPX5_RICCO) 0.9780794774963646 60 Solyc03g058960 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *-* A0A151TQB6_CAJCA) 0.9780699471930377 33 Solyc10g007320 Uroporphyrinogen decarboxylase (AHRD V3.3 *** K4CXR1_SOLLC) 0.9778867785467883 35 Solyc12g006260 L-fucokinase/GDP-L-fucose pyrophosphorylase (AHRD V3.3 --* AT1G01220.7) 0.97748214204895 54 Solyc09g011830 Transcription antitermination nusg (AHRD V3.3 *** A0A0B0P8C3_GOSAR) 0.9772712495737247 69 Solyc04g063360 ATP-dependent zinc metalloprotease FTSH (AHRD V3.3 *** W9S040_9ROSA) 0.9768971941458052 46 Solyc09g074940 (DB240) meloidogyne-induced giant cell protein 0.9762894188679997 52 Solyc06g082300 UDP-glycosyltransferase (AHRD V3.3 *** A0A067XTI9_CICAR) 0.975915978543269 82 Solyc10g007840 Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial (AHRD V3.3 *** K4CXW3_SOLLC) 0.9758123614319238 52 Solyc10g080040 Ribonuclease III family protein (AHRD V3.3 *-* AT4G37510.1) 0.9757801749145605 38 Solyc01g106020 RNA-binding KH domain protein (AHRD V3.3 *** G7JV44_MEDTR) 0.9756822216908264 58 Solyc06g008160 Protein FLUORESCENT IN BLUE LIGHT, chloroplastic (AHRD V3.3 *** FLU_ARATH) 0.9749430095742961 56 Solyc07g064950 trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1) 0.9743584502508936 72 Solyc01g105460 1,4-dihydroxy-2-naphthoate polyprenyltransferase (AHRD V3.3 *** A0A0K9PHB6_ZOSMR) 0.9743441889888044 77 Solyc05g054640 2-oxoglutarate dehydrogenase E1 component family protein (AHRD V3.3 *** B9HM58_POPTR) 0.9740534971267272 30 Solyc09g031780 Chloroplast inner envelope family protein (AHRD V3.3 *** B9INP5_POPTR) 0.9735282598576687 71 Solyc12g027800 0.9735054739378982 32 Solyc04g009530 Glutathione S-transferase (AHRD V3.3 *** A0A0N9HM59_HELAN) 0.9731939607892824 92 Solyc06g053600 Oxidoreductase, aldo/keto reductase family protein, expressed (AHRD V3.3 *-* Q10GW3_ORYSJ) 0.9726537821121964 34 Solyc08g042080 Multiple chloroplast division site 1, putative (AHRD V3.3 *** A0A061FEL2_THECC) 0.9721094643446261 73 Solyc06g053560 Casein kinase, putative (AHRD V3.3 *** B9SS69_RICCO) 0.9718321636345847 38 Solyc02g091280 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BCS6_SOLLC) 0.9712099019548216 94 Solyc02g049070 4-coumarate:CoA ligase (AHRD V3.3 --* O81139_POPTM) 0.9711401194535879 52 Solyc04g082640 Chloroplast inner membrane localized protein (AHRD V3.3 *** Q9C7S3_ARATH) 0.9710090156372883 98 Solyc01g095900 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT1G01320.3) 0.9707423519998353 43 Solyc04g051580 (DB244) meloidogyne-induced giant cell protein 0.9705027610001672 45 Solyc04g005780 LOW QUALITY:glyoxal oxidase-related protein (AHRD V3.3 *** AT1G14430.1) 0.9704902011962085 46 Solyc08g045780 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RVL0_RICCO) 0.9702786521570799 48 Solyc08g015660 6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** K4CJ96_SOLLC) 0.9702168181852582 92 Solyc11g072830 Chitinase (AHRD V3.3 *** G7KL79_MEDTR) 0.9701730632870078 50 Solyc02g061820 ankyrin repeat protein (AHRD V3.3 *** AT5G66055.1) 0.9701396960156622 51 Solyc02g069780 SIT4 phosphatase-associated family protein (AHRD V3.3 *** AT1G30470.1) 0.9700110061833077 52 Solyc05g011840 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (AHRD V3.3 --* AT4G14350.4) 0.9699605851568973 61 Solyc06g076350 LePCL1 0.9694567864517517 55 Solyc02g079730 Thioredoxin family protein, putative (AHRD V3.3 *** G7LIP5_MEDTR) 0.9693948987261011 94 Solyc06g071070 NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT3G03980.1),Pfam:PF13561 0.9692831086672566 59 Solyc01g081110 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A118K4S4_CYNCS) 0.9690943616566857 59 Solyc06g082760 50S ribosomal protein L17 (AHRD V3.3 *** W9R5S7_9ROSA) 0.9686042712888624 62 Solyc02g067890 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT5G14430.1) 0.9685897290821958 79 Solyc01g009970 catalytic/ hydrolase (AHRD V3.3 *** AT2G35450.1) 0.9684381350812 64 Solyc02g062230 Small auxin up-regulated RNA32 0.9677779579766217 67 Solyc01g100210 Hexosyltransferase (AHRD V3.3 *** K4B155_SOLLC) 0.9677284348022597 68 Solyc12g005570 1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (AHRD V3.3 *** A0A0B0PDZ2_GOSAR) 0.9673856935908982 71 Solyc08g006780 Nucleoid-associated protein (AHRD V3.3 *** A0A199V9B5_ANACO) 0.96738368932329 72 Solyc05g007780 Photosynthetic NDH subcomplex L 2 (AHRD V3.3 *** A0A0F7GYP0_9ROSI) 0.9672647333760509 100 Solyc06g060260 stromal ascorbate peroxidase 7 0.9672099786281173 74 Solyc01g106220 DNA polymerase V (AHRD V3.3 *** A0A0B2QFT5_GLYSO) 0.9670453971161792 96 Solyc01g106240 0.9670453971161792 96 Solyc01g067070 Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G48970.1) 0.9669769819472965 78 Solyc03g120230 MAR-binding filament-like protein 1 (AHRD V3.3 *** MFP1_SOLLC) 0.9668294286767838 79 Solyc06g006040 Non-specific serine/threonine protein kinase (AHRD V3.3 *** M1ANR5_SOLTU) 0.9663660371423775 80 Solyc06g036340 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G49140.1) 0.9663385776068523 81 Solyc03g118690 Translocon at the outer membrane of chloroplasts 64 (AHRD V3.3 *** TOC64_PEA) 0.9655157980902707 88 Solyc11g027830 ATP-dependent protease La (LON) domain protein (AHRD V3.3 *** AT1G35340.1) 0.9650515590194441 95 Solyc01g110270 CRS1/YhbY domain protein (AHRD V3.3 *-* G7JIN8_MEDTR) 0.964942235222272 96 Solyc11g045270 Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 *-* AT3G11890.7) 0.9644216420729533 98 Solyc04g009310 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BP87_SOLLC) 0.9643766074766917 99