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Expression profile for PSME_00040440-RA (PSME_00040440-RA)


Attention: This gene has low abundance.

Description : (at1g47530 : 184.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)

Condition specificity: 3 h after light (SPM: 0.63, entropy: 2.58, tau: 0.48)
Tissue specificity: Morning (SPM: 0.63, entropy: 2.58, tau: 0.48)
ZT time: ZT0-3 (SPM: 0.63, entropy: 2.58, tau: 0.48)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximumSequence Description Alias PCC hrr Pp1s342_32V6 histone h4 0.6793883509636572 45 Pp1s1_703V6 spotted leaf 0.6383832245240163 7 Pp1s64_14V6 axoneme central apparatus 0.6235102496077317 25 Pp1s236_35V6 0.6149173666241844 36 Pp1s241_118V6 0.5879647267000709 59 Pp1s168_101V6 pentatricopeptide repeat-containing 0.5809235440434339 66 Pp1s156_154V6 0.5762910281266017 40 Pp1s24_262V6 cytochrome p450 0.5700422822127879 60 Pp1s3_351V6 mitochondrial import receptor subunit tom40 0.5687801310960836 53 Pp1s429_24V6 0.5667756737764067 86 Pp1s37_98V6 T1J8.11; zinc finger (C2H2 type) family protein [Arabidopsis thaliana] 0.5569034668521563 74