Sequence Description Alias PCC hrr evm.model.contig_2048.3 no hits & (original description: no original description) 0.9808968290067452 6 evm.model.contig_2126.14 (at2g32240 : 92.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 178.0) & (original description: no original description) 0.973186996762927 24 evm.model.contig_4545.1 (at1g50490 : 175.0) Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.; ubiquitin-conjugating enzyme 20 (UBC20); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme19 (TAIR:AT3G20060.1); Has 10004 Blast hits to 9989 proteins in 393 species: Archae - 0; Bacteria - 0; Metazoa - 4460; Fungi - 2092; Plants - 1828; Viruses - 23; Other Eukaryotes - 1601 (source: NCBI BLink). & (p25866|ubc2_wheat : 121.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 350.0) & (original description: no original description) 0.9709800893663978 5 evm.model.contig_2290.8 (at1g69220 : 191.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 145.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: no original description) 0.9668925860456596 16 evm.model.contig_546.6 no hits & (original description: no original description) 0.9660801083610635 47 evm.model.contig_2294.2 (at4g33260 : 340.0) putative cdc20 protein (CDC20.2); CDC20.2; FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: heterotrimeric G-protein complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33270.1). & (reliability: 630.0) & (original description: no original description) 0.9659663010659169 13 evm.model.contig_2063.2 (at4g38430 : 92.8) Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.; rho guanyl-nucleotide exchange factor 1 (ROPGEF1); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.9650117971702058 31 evm.model.contig_3407.2 no hits & (original description: no original description) 0.9629467611669332 62 evm.model.contig_4453.2 no hits & (original description: no original description) 0.9623244404065153 14 evm.model.contig_3693.2 (q6z7l8|rac7_orysa : 171.0) Rac-like GTP-binding protein 7 (OsRac7) (GTPase protein ROP5) - Oryza sativa (Rice) & (at4g35020 : 168.0) A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.; RAC-like 3 (RAC3); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1). & (reliability: 336.0) & (original description: no original description) 0.9617572287346114 42 evm.model.contig_4453.3 no hits & (original description: no original description) 0.958536412712507 65 evm.model.contig_2063.3 no hits & (original description: no original description) 0.9575933116043789 49 evm.model.contig_3448.2 (at2g33560 : 119.0) Encodes BUBR1. May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (BUBR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitotic cell cycle spindle assembly checkpoint; LOCATED IN: chromocenter, kinetochore; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Mad3/BUB1 homology region 1 (InterPro:IPR013212); BEST Arabidopsis thaliana protein match is: Mad3/BUB1 homology region 1 (TAIR:AT5G05510.1). & (reliability: 238.0) & (original description: no original description) 0.957431123785446 67 evm.model.contig_4502.2 no hits & (original description: no original description) 0.9564013142331117 36 evm.model.contig_616.2 no hits & (original description: no original description) 0.951537064278386 74 evm.model.contig_2244.4 (at1g69220 : 208.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 158.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 416.0) & (original description: no original description) 0.9502666632812587 69 evm.model.contig_2198.3 no hits & (original description: no original description) 0.9499771486944711 66 evm.model.contig_3488.4 no hits & (original description: no original description) 0.9488963856189568 73 evm.model.contig_433.6 no hits & (original description: no original description) 0.94618970097475 57 evm.model.contig_2052.4 no hits & (original description: no original description) 0.9457539852162814 73 evm.model.contig_2305.1 no hits & (original description: no original description) 0.9438751737946839 50 evm.model.contig_2284.25 no hits & (original description: no original description) 0.9438607860153864 22 evm.model.contig_561.2 no hits & (original description: no original description) 0.9431413544406433 32 evm.model.contig_570.4 (at5g67270 : 105.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.9415407828153539 78 evm.model.contig_575.3 (at3g47460 : 681.0) member of SMC subfamily; ATSMC2; FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 105566 Blast hits to 56901 proteins in 3202 species: Archae - 1526; Bacteria - 19204; Metazoa - 44960; Fungi - 8478; Plants - 5252; Viruses - 457; Other Eukaryotes - 25689 (source: NCBI BLink). & (reliability: 1362.0) & (original description: no original description) 0.9414225417491197 78 evm.model.contig_4432.14 (at3g13530 : 180.0) MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.; mitogen-activated protein kinase kinase kinase 7 (MAPKKK7); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: ovule developmental stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 6 (TAIR:AT3G07980.1); Has 137235 Blast hits to 134768 proteins in 5401 species: Archae - 190; Bacteria - 15422; Metazoa - 52001; Fungi - 13364; Plants - 33616; Viruses - 670; Other Eukaryotes - 21972 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 151.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 340.0) & (original description: no original description) 0.9407485705204817 70 evm.model.contig_3488.5 no hits & (original description: no original description) 0.9404079841542337 79 evm.model.contig_2146.14 (at1g19880 : 171.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description) 0.9388079008462139 28 evm.model.contig_3440.5 no hits & (original description: no original description) 0.9382448684004356 29 evm.model.contig_3840.2 no hits & (original description: no original description) 0.9377413095468956 78 evm.model.contig_448.6 (q6vag0|tba2_goshi : 681.0) Tubulin alpha-2 chain (Alpha-2 tubulin) - Gossypium hirsutum (Upland cotton) & (at1g50010 : 672.0) Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1344.0) & (original description: no original description) 0.9363417132087253 77 evm.model.contig_3425.13 (at5g41790 : 117.0) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description) 0.9355785667029342 80 evm.model.contig_2083.11 no hits & (original description: no original description) 0.9355192991558258 79 evm.model.contig_491.5 no hits & (original description: no original description) 0.9352416212936598 78 evm.model.contig_444.24 (at3g10220 : 147.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.9350597915434347 81 evm.model.contig_2102.12 no hits & (original description: no original description) 0.9337491282396321 36 evm.model.contig_3456.8 no hits & (original description: no original description) 0.9332260423117359 37 evm.model.contig_4428.5 (at5g02320 : 218.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (p93417|gam1_orysa : 93.2) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 436.0) & (original description: no original description) 0.9327238146591799 75 evm.model.contig_494.1 (at2g26980 : 238.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 234.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: no original description) 0.9325991083854952 75 evm.model.contig_3840.1 no hits & (original description: no original description) 0.9315791032723284 80 evm.model.contig_581.3 no hits & (original description: no original description) 0.9298560770124127 82 evm.model.contig_2073.5 (p37832|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7 tubulin) (pTUB22) - Oryza sativa (Rice) & (at5g12250 : 681.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1362.0) & (original description: no original description) 0.9292070356192427 86 evm.model.contig_2060.6 no hits & (original description: no original description) 0.9271634766738849 78 evm.model.contig_771.1 no hits & (original description: no original description) 0.9266792971386655 44 evm.model.contig_716.1 no hits & (original description: no original description) 0.9264896009365423 87 evm.model.contig_4408.5 (q9xfh3|mad2_maize : 179.0) Mitotic spindle checkpoint protein MAD2 - Zea mays (Maize) & (at3g25980 : 176.0) Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; MITOTIC ARREST-DEFICIENT 2 (MAD2); CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511). & (reliability: 352.0) & (original description: no original description) 0.9256404225559643 93 evm.model.contig_649.1 no hits & (original description: no original description) 0.925130195939372 47 evm.model.contig_2139.3 no hits & (original description: no original description) 0.9251053087893163 81 evm.model.contig_478.1 no hits & (original description: no original description) 0.9240347621758755 86 evm.model.contig_2104.15 no hits & (original description: no original description) 0.9236325950348421 50 evm.model.contig_3392.11 no hits & (original description: no original description) 0.9223388399952573 96 evm.model.contig_2274.10 no hits & (original description: no original description) 0.9218647135688911 86 evm.model.contig_2090.10 (at3g45850 : 421.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). & (o23826|k125_tobac : 421.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 842.0) & (original description: no original description) 0.9208464744538826 94 evm.model.contig_2063.1 no hits & (original description: no original description) 0.9193104719721623 86 evm.model.contig_3477.2 (at3g23890 : 1176.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1103.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (reliability: 2352.0) & (original description: no original description) 0.9186141149207492 83 evm.model.contig_3407.6 (at5g07590 : 177.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.9176681206962123 91 evm.model.contig_2077.9 (at1g80370 : 173.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (p30278|ccnb2_medsa : 161.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 338.0) & (original description: no original description) 0.9173134812606967 84 evm.model.contig_2100.14 (at5g27550 : 333.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2); Has 10360 Blast hits to 10027 proteins in 304 species: Archae - 0; Bacteria - 2; Metazoa - 4607; Fungi - 1315; Plants - 1897; Viruses - 0; Other Eukaryotes - 2539 (source: NCBI BLink). & (p46869|fla10_chlre : 183.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (gnl|cdd|68872 : 95.5) no description available & (reliability: 666.0) & (original description: no original description) 0.9172294767181746 87 evm.model.contig_2112.3 no hits & (original description: no original description) 0.9165448862557813 94 evm.model.contig_3558.6 (at5g48600 : 612.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (reliability: 1224.0) & (original description: no original description) 0.9150823065029243 85 evm.model.contig_542.7 no hits & (original description: no original description) 0.9144173070748416 79 evm.model.contig_4446.19 (at5g60930 : 330.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46869|fla10_chlre : 225.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 660.0) & (original description: no original description) 0.9139949970760508 88 evm.model.contig_4443.19 no hits & (original description: no original description) 0.9133145001958841 89 evm.model.contig_2085.14 (q9m7j4|mfp1_tobac : 97.4) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (at4g21270 : 96.7) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.; kinesin 1 (ATK1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 5 (TAIR:AT4G05190.1); Has 113981 Blast hits to 63024 proteins in 3025 species: Archae - 1256; Bacteria - 16796; Metazoa - 54341; Fungi - 9779; Plants - 6646; Viruses - 430; Other Eukaryotes - 24733 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.9131716397955161 95 evm.model.contig_545.9 no hits & (original description: no original description) 0.9115239950670929 65 evm.model.contig_2252.1 no hits & (original description: no original description) 0.9112863389857395 86 evm.model.contig_3543.1 (at2g35630 : 129.0) Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.; MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.9101582379264591 91 evm.model.contig_522.19 no hits & (original description: no original description) 0.9092789544320222 68 evm.model.contig_448.14 (at1g61000 : 125.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.9090204177479169 87 evm.model.contig_479.9 no hits & (original description: no original description) 0.9073425803194246 95 evm.model.contig_2306.4 (at3g54630 : 120.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.907342176920694 100 evm.model.contig_431.10 (at3g57060 : 426.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (reliability: 852.0) & (original description: no original description) 0.9072763650783283 91 evm.model.contig_2348.7 (at3g12530 : 99.4) PSF2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Psf2 (InterPro:IPR007257), GINS complex, subunit Psf2, subgroup (InterPro:IPR016906); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description) 0.9055371449493997 77 evm.model.contig_3467.7 (at1g67630 : 101.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.9054097875365628 74 evm.model.contig_2305.2 (original description: no original description) 0.9053681289245379 75 evm.model.contig_3525.5 no hits & (original description: no original description) 0.9049778522068245 94 evm.model.contig_4458.2 no hits & (original description: no original description) 0.9016653525300882 78 evm.model.contig_3692.2 no hits & (original description: no original description) 0.9003297572317676 79 evm.model.contig_4440.2 no hits & (original description: no original description) 0.8968139109391211 80 evm.model.contig_2048.10 (at3g23580 : 461.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.; ribonucleotide reductase 2A (RNR2A); CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Ferritin/ribonucleotide reductase-like family protein (TAIR:AT3G27060.1); Has 9602 Blast hits to 9597 proteins in 2376 species: Archae - 34; Bacteria - 4358; Metazoa - 261; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3795 (source: NCBI BLink). & (p49730|rir2_tobac : 453.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 922.0) & (original description: no original description) 0.8951711815507641 83 evm.model.contig_3395.13 (at5g54670 : 349.0) Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.; kinesin 3 (ATK3); FUNCTIONS IN: microtubule binding, microtubule motor activity, ATPase activity; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 2 (TAIR:AT4G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o23826|k125_tobac : 206.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 698.0) & (original description: no original description) 0.893880983644127 98 evm.model.contig_567.4 (at2g40550 : 167.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description) 0.8937680347028903 87 evm.model.contig_4468.5 no hits & (original description: no original description) 0.893302961767012 88 evm.model.contig_2114.1 (at3g25580 : 111.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin domain-containing protein 9 homolog (TAIR:AT2G18990.1); Has 1084 Blast hits to 1084 proteins in 275 species: Archae - 18; Bacteria - 74; Metazoa - 392; Fungi - 176; Plants - 221; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.890790598606541 94 evm.model.contig_2468.2 (at4g29000 : 101.0) Tesmin/TSO1-like CXC domain-containing protein; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT2G20110.1); Has 1016 Blast hits to 666 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 285; Fungi - 4; Plants - 322; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.889730091627088 90 evm.model.contig_575.5 no hits & (original description: no original description) 0.8889763624114191 96 evm.model.contig_575.2 no hits & (original description: no original description) 0.8889477165511195 93 evm.model.contig_2655.1 no hits & (original description: no original description) 0.8875888208565972 94 evm.model.contig_2100.8 (at5g22110 : 178.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description) 0.8839433078434323 96 evm.model.contig_3537.4 (at2g07690 : 633.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 282.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1266.0) & (original description: no original description) 0.8811963469257472 100