Sequence Description Alias PCC hrr evm.model.contig_2030.4 (at1g15110 : 179.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description) 0.9783470316424941 2 evm.model.contig_2157.15 no hits & (original description: no original description) 0.968085575511716 14 evm.model.contig_3800.3 no hits & (original description: no original description) 0.965921803008907 5 evm.model.contig_2209.2 (at3g05480 : 92.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 184.0) & (original description: no original description) 0.9644621532874291 7 evm.model.contig_538.8 no hits & (original description: no original description) 0.9624716840405589 27 evm.model.contig_2057.2 (q94hl5|t2ag_orysa : 89.4) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (at4g24440 : 85.5) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description) 0.962143938931344 29 evm.model.contig_2098.15 no hits & (original description: no original description) 0.9613007485534206 7 evm.model.contig_465.6 no hits & (original description: no original description) 0.9606121797600183 46 evm.model.contig_4461.5 no hits & (original description: no original description) 0.9603091409444925 22 evm.model.contig_2126.1 (at1g69523 : 150.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G69526.2); Has 8414 Blast hits to 8405 proteins in 1811 species: Archae - 286; Bacteria - 5877; Metazoa - 213; Fungi - 292; Plants - 233; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) 0.9599584992373563 10 evm.model.contig_3448.4 "(at3g50000 : 369.0) casein kinase II catalytic subunit alpha; ""casein kinase II, alpha chain 2"" (CKA2); FUNCTIONS IN: protein binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase alpha 1 (TAIR:AT5G67380.1); Has 86321 Blast hits to 85419 proteins in 2558 species: Archae - 72; Bacteria - 9686; Metazoa - 32978; Fungi - 11348; Plants - 15028; Viruses - 319; Other Eukaryotes - 16890 (source: NCBI BLink). & (p28523|csk2a_maize : 365.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 738.0) & (original description: no original description)" 0.9594087792283488 43 evm.model.contig_4423.5 (at1g59820 : 382.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q2ras0|aca5_orysa : 96.7) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (reliability: 718.0) & (original description: no original description) 0.9592275977995159 38 evm.model.contig_3423.13 (at1g79720 : 82.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.9589986220193293 50 evm.model.contig_3485.6 (at1g54370 : 259.0) sodium hydrogen exchanger 5 (NHX5); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: lithium ion transport, sodium ion transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Na+/H+ exchanger, isoform 5/6/8, conserved region (InterPro:IPR018409), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 6 (TAIR:AT1G79610.1); Has 6647 Blast hits to 6641 proteins in 1771 species: Archae - 114; Bacteria - 4554; Metazoa - 890; Fungi - 160; Plants - 421; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description) 0.9589147467874085 46 evm.model.contig_2313.4 (at5g58140 : 270.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (p15792|kpk1_phavu : 259.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 540.0) & (original description: no original description) 0.9579012427889869 47 evm.model.contig_2015.4 (at2g20495 : 91.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description) 0.9577891520654501 58 evm.model.contig_2484.1 no hits & (original description: no original description) 0.9571249790560054 52 evm.model.contig_4398.4 no hits & (original description: no original description) 0.95685018548055 46 evm.model.contig_3423.25 no hits & (original description: no original description) 0.9560299215499328 52 evm.model.contig_2070.11 no hits & (original description: no original description) 0.9558252739280613 20 evm.model.contig_440.1 (at2g29940 : 522.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 493.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1044.0) & (original description: no original description) 0.9552302975821849 46 evm.model.contig_2089.13 no hits & (original description: no original description) 0.9547138534578524 57 evm.model.contig_2157.16 no hits & (original description: no original description) 0.9540215761532886 24 evm.model.contig_3532.7 no hits & (original description: no original description) 0.952720288183575 24 evm.model.contig_2025.42 (at4g32180 : 236.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68872 : 87.4) no description available & (reliability: 472.0) & (original description: no original description) 0.9522537410689805 65 evm.model.contig_604.6 (q9g4f5|cysa_cucsa : 114.0) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (at1g65410 : 108.0) Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; non-intrinsic ABC protein 11 (NAP11); FUNCTIONS IN: transporter activity, ATPase activity; INVOLVED IN: lipid transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 424474 Blast hits to 380294 proteins in 4085 species: Archae - 7338; Bacteria - 330543; Metazoa - 9238; Fungi - 6335; Plants - 5254; Viruses - 18; Other Eukaryotes - 65748 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.9519540384925612 40 evm.model.contig_559.2 no hits & (original description: no original description) 0.9519295432551644 56 evm.model.contig_3451.6 (at4g16440 : 202.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 404.0) & (original description: no original description) 0.951087528061164 64 evm.model.contig_2044.12 (at1g08840 : 403.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 806.0) & (original description: no original description) 0.9510116978923543 29 evm.model.contig_4403.18 no hits & (original description: no original description) 0.9503083604890556 45 evm.model.contig_2281.3 (at1g18260 : 118.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (gnl|cdd|68872 : 112.0) no description available & (reliability: 236.0) & (original description: no original description) 0.9496355434813191 34 evm.model.contig_545.1 no hits & (original description: no original description) 0.9490328619483962 67 evm.model.contig_3404.5 no hits & (original description: no original description) 0.9485606885574543 72 evm.model.contig_4438.21 (at2g39970 : 173.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.9485034521933629 37 evm.model.contig_503.12 (at1g50250 : 579.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q5z974|ftsh_orysa : 578.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1158.0) & (original description: no original description) 0.9484925116139472 42 evm.model.contig_527.18 (at2g28840 : 92.4) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 88.6) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 177.2) & (original description: no original description) 0.9483417563152727 36 evm.model.contig_456.9 (at5g42990 : 147.0) ubiquitin-conjugating enzyme 18 (UBC18); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G45050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.9466354793052032 71 evm.model.contig_4501.3 no hits & (original description: no original description) 0.9464339326674931 94 evm.model.contig_2489.1 no hits & (original description: no original description) 0.9462629901624786 63 evm.model.contig_2112.14 (at3g59500 : 121.0) Integral membrane HRF1 family protein; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT1G30890.2); Has 472 Blast hits to 472 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 73; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.9459816794154836 81 evm.model.contig_3432.3 no hits & (original description: no original description) 0.9451960770990779 63 evm.model.contig_513.1 (gnl|cdd|68872 : 135.0) no description available & (at1g18260 : 111.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (gnl|cdd|39774 : 82.1) no description available & (reliability: 222.0) & (original description: no original description) 0.9450358575938277 43 evm.model.contig_2150.10 no hits & (original description: no original description) 0.9450197215735666 77 evm.model.contig_650.5 no hits & (original description: no original description) 0.944730308783739 72 evm.model.contig_2096.1 no hits & (original description: no original description) 0.9445739100084176 95 evm.model.contig_3397.6 no hits & (original description: no original description) 0.9445424475727898 69 evm.model.contig_2391.5 no hits & (original description: no original description) 0.9444692625506046 77 evm.model.contig_3456.1 no hits & (original description: no original description) 0.9444147335505129 86 evm.model.contig_2030.12 (at5g55630 : 111.0) Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.; TWO PORE K CHANNEL (KCO1); CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 5 (TAIR:AT4G01840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.9439453718650368 85 evm.model.contig_3599.3 no hits & (original description: no original description) 0.9439082415104273 98 evm.model.contig_4461.4 (at3g25040 : 227.0) Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling.; endoplasmic reticulum retention defective 2B (ERD2B); FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, protein transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G29330.1); Has 912 Blast hits to 910 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 322; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (q9ztn2|erd2_pethy : 221.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 454.0) & (original description: no original description) 0.9439049385186317 52 evm.model.contig_431.5 (at5g64610 : 180.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8li34|myst1_orysa : 180.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (reliability: 360.0) & (original description: no original description) 0.9433069996313088 52 evm.model.contig_2088.11 no hits & (original description: no original description) 0.9430894755351437 72 evm.model.contig_3555.2 (at1g12350 : 132.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description) 0.942755224002221 54 evm.model.contig_3553.3 no hits & (original description: no original description) 0.9423226046898603 84 evm.model.contig_2020.26 no hits & (original description: no original description) 0.9423213395493414 56 evm.model.contig_2282.6 no hits & (original description: no original description) 0.9421182702699687 75 evm.model.contig_2244.2 (at4g27745 : 132.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p59234|yipl_soltu : 120.0) Protein yippee-like - Solanum tuberosum (Potato) & (reliability: 242.0) & (original description: no original description) 0.9416514143467402 58 evm.model.contig_2017.11 no hits & (original description: no original description) 0.939268103463553 90 evm.model.contig_2307.3 (gnl|cdd|68872 : 110.0) no description available & (at5g22830 : 82.8) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.9383672876508886 81 evm.model.contig_468.8 (at1g79690 : 110.0) nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.9382178110552012 65 evm.model.contig_2255.9 (at3g24530 : 131.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description) 0.9376643857519286 67 evm.model.contig_3508.1 no hits & (original description: no original description) 0.937131975022782 90 evm.model.contig_505.8 (at5g17300 : 91.7) Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description) 0.9367425992009815 70 evm.model.contig_2157.12 (original description: no original description) 0.9362146298383452 71 evm.model.contig_2059.21 no hits & (original description: no original description) 0.9354215112194058 92 evm.model.contig_815.1 (at3g04530 : 105.0) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (p53681|crk_dauca : 98.6) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 200.0) & (original description: no original description) 0.9353990425246576 73 evm.model.contig_2016.19 no hits & (original description: no original description) 0.9353751259931036 74 evm.model.contig_2149.5 no hits & (original description: no original description) 0.9347019191732107 75 evm.model.contig_444.30 (at2g26000 : 191.0) BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein (TAIR:AT2G42160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description) 0.9346624112168681 95 evm.model.contig_3490.11 (at4g23660 : 237.0) Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50).; polyprenyltransferase 1 (PPT1); FUNCTIONS IN: 4-hydroxybenzoate nonaprenyltransferase activity; INVOLVED IN: ubiquinone biosynthetic process, embryo development; LOCATED IN: integral to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 4-hydroxybenzoate polyprenyl transferase (InterPro:IPR006370), UbiA prenyltransferase (InterPro:IPR000537). & (reliability: 474.0) & (original description: no original description) 0.934343916610021 77 evm.model.contig_538.7 (original description: no original description) 0.9340300781016787 78 evm.model.contig_4487.5 (at5g56760 : 217.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description) 0.933789111954427 84 evm.model.contig_3478.8 no hits & (original description: no original description) 0.9334521085318123 81 evm.model.contig_4478.3 (at1g23440 : 119.0) Peptidase C15, pyroglutamyl peptidase I-like; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G56700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.9334228446266519 82 evm.model.contig_516.6 (at4g04860 : 98.2) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q4g2j4|der21_maize : 97.8) Derlin-2.1 (ZmDerlin2-1) - Zea mays (Maize) & (reliability: 185.6) & (original description: no original description) 0.9332286326590328 95 evm.model.contig_2127.5 no hits & (original description: no original description) 0.9321392484184812 85 evm.model.contig_4500.4 no hits & (original description: no original description) 0.9319697692484267 86 evm.model.contig_2282.5 no hits & (original description: no original description) 0.9319370187472131 97 evm.model.contig_4467.6 no hits & (original description: no original description) 0.9312413166922866 88 evm.model.contig_2056.10 (at4g24810 : 226.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (reliability: 452.0) & (original description: no original description) 0.9310350001000479 90 evm.model.contig_4421.3 no hits & (original description: no original description) 0.930984733019985 99 evm.model.contig_2022.15 no hits & (original description: no original description) 0.9306769040173231 97 evm.model.contig_2279.4 (at5g16150 : 265.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07423|hex6_ricco : 84.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 530.0) & (original description: no original description) 0.9304309595419198 93 evm.model.contig_2275.5 no hits & (original description: no original description) 0.9295016468601621 97 evm.model.contig_527.5 no hits & (original description: no original description) 0.9293989376293184 98 evm.model.contig_496.17 no hits & (original description: no original description) 0.9278102862300383 100