Sequence Description Alias PCC hrr evm.model.contig_499.4 (at1g65540 : 290.0) LETM1-like protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G59820.1); Has 7253 Blast hits to 6279 proteins in 764 species: Archae - 76; Bacteria - 1084; Metazoa - 3311; Fungi - 589; Plants - 471; Viruses - 24; Other Eukaryotes - 1698 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.9605440367707379 1 evm.model.contig_2020.26 no hits & (original description: no original description) 0.9543000686899298 10 evm.model.contig_444.31 (original description: no original description) 0.9447260906952711 20 evm.model.contig_4450.1 no hits & (original description: no original description) 0.9413611498353781 6 evm.model.contig_467.6 no hits & (original description: no original description) 0.9384180972412738 49 evm.model.contig_751.2 no hits & (original description: no original description) 0.9375007439605844 19 evm.model.contig_2262.6 no hits & (original description: no original description) 0.9318207936351203 24 evm.model.contig_4437.2 no hits & (original description: no original description) 0.9305695404339724 32 evm.model.contig_3401.3 no hits & (original description: no original description) 0.9300504160657582 47 evm.model.contig_484.3 no hits & (original description: no original description) 0.9284693646514293 73 evm.model.contig_2059.26 (at2g21410 : 570.0) Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.; vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 1140.0) & (original description: no original description) 0.9282762756303069 64 evm.model.contig_2500.5 no hits & (original description: no original description) 0.9253405779616498 12 evm.model.contig_2056.10 (at4g24810 : 226.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (reliability: 452.0) & (original description: no original description) 0.9252221687068445 13 evm.model.contig_2116.6 no hits & (original description: no original description) 0.9247685113255854 29 evm.model.contig_4419.2 no hits & (original description: no original description) 0.9246013102579548 45 evm.model.contig_4454.6 no hits & (original description: no original description) 0.9242336878170007 19 evm.model.contig_3531.2 (at4g36800 : 201.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (p35130|ubc2_medsa : 85.5) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 370.0) & (original description: no original description) 0.9219931017666352 17 evm.model.contig_454.18 no hits & (original description: no original description) 0.9219264942698963 18 evm.model.contig_2347.3 (at3g15460 : 210.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.9214447833211279 50 evm.model.contig_4493.3 "(at2g38880 : 160.0) Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance.; ""nuclear factor Y, subunit B1"" (NF-YB1); CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B8 (TAIR:AT2G37060.3). & (p25209|nfyb_maize : 155.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 320.0) & (original description: no original description)" 0.9213117713201674 20 evm.model.contig_527.2 no hits & (original description: no original description) 0.9212904053075144 47 evm.model.contig_2298.2 no hits & (original description: no original description) 0.9207597834885466 25 evm.model.contig_3487.6 (at2g04845 : 128.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description) 0.9200566158887711 72 evm.model.contig_2020.13 (at3g03340 : 87.0) unfertilized embryo sac 6 (UNE6); CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT5G17440.1); Has 25128 Blast hits to 10547 proteins in 429 species: Archae - 23; Bacteria - 333; Metazoa - 14905; Fungi - 3154; Plants - 2060; Viruses - 86; Other Eukaryotes - 4567 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description) 0.919727656564913 24 evm.model.contig_2083.7 no hits & (original description: no original description) 0.9178612973174659 30 evm.model.contig_3442.5 no hits & (original description: no original description) 0.917628147716054 28 evm.model.contig_504.15 no hits & (original description: no original description) 0.9173118693538278 29 evm.model.contig_2098.9 (at3g62270 : 130.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.9162552200031142 31 evm.model.contig_480.1 (original description: no original description) 0.9130135900036747 40 evm.model.contig_2142.6 no hits & (original description: no original description) 0.9127954665067523 35 evm.model.contig_2157.4 no hits & (original description: no original description) 0.9117680609353327 53 evm.model.contig_751.1 no hits & (original description: no original description) 0.9116162297457434 41 evm.model.contig_3405.2 no hits & (original description: no original description) 0.9115091562986088 90 evm.model.contig_3800.4 (at5g55260 : 384.0) Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.; protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 352.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 768.0) & (original description: no original description) 0.9105824746416203 40 evm.model.contig_544.7 no hits & (original description: no original description) 0.9075815052004982 83 evm.model.contig_2296.15 no hits & (original description: no original description) 0.907494162238104 71 evm.model.contig_2056.1 (at5g14660 : 149.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.9069972043193042 46 evm.model.contig_3423.36 (at1g65660 : 294.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 588.0) & (original description: no original description) 0.9063999140406561 48 evm.model.contig_2157.1 no hits & (original description: no original description) 0.9043593300948173 51 evm.model.contig_3531.1 (at3g49370 : 120.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 120826 Blast hits to 119042 proteins in 3470 species: Archae - 178; Bacteria - 14958; Metazoa - 45068; Fungi - 12844; Plants - 26097; Viruses - 535; Other Eukaryotes - 21146 (source: NCBI BLink). & (p53681|crk_dauca : 112.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 238.0) & (original description: no original description) 0.902525572119378 52 evm.model.contig_2494.34 no hits & (original description: no original description) 0.9024587760752444 89 evm.model.contig_2286.2 no hits & (original description: no original description) 0.9020179520229024 55 evm.model.contig_2445.5 no hits & (original description: no original description) 0.900488583363197 57 evm.model.contig_2357.3 no hits & (original description: no original description) 0.9003968088070562 58 evm.model.contig_3416.9 no hits & (original description: no original description) 0.89774400205119 60 evm.model.contig_2020.31 (at4g39150 : 126.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (reliability: 252.0) & (original description: no original description) 0.8962011107262677 81 evm.model.contig_618.1 no hits & (original description: no original description) 0.8958958284093784 66 evm.model.contig_458.6 (at5g01230 : 276.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description) 0.8952865352075262 68 evm.model.contig_4468.3 no hits & (original description: no original description) 0.8944435283713933 69 evm.model.contig_2068.22 no hits & (original description: no original description) 0.8932226723303932 72 evm.model.contig_2282.10 (at2g41530 : 273.0) Encodes a protein with S-formylglutathione hydrolase activity.; S-formylglutathione hydrolase (SFGH); FUNCTIONS IN: hydrolase activity, acting on ester bonds, S-formylglutathione hydrolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative esterase (InterPro:IPR000801), S-formylglutathione hydrolase (InterPro:IPR014186); Has 3295 Blast hits to 3294 proteins in 1269 species: Archae - 2; Bacteria - 2478; Metazoa - 258; Fungi - 146; Plants - 60; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 546.0) & (original description: no original description) 0.8929279365203608 95 evm.model.contig_2492.4 no hits & (original description: no original description) 0.8928417634759535 83 evm.model.contig_4413.6 (at3g20800 : 372.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description) 0.8920059234052393 76 evm.model.contig_3401.8 no hits & (original description: no original description) 0.8906626997396824 83 evm.model.contig_4456.20 (at4g35410 : 171.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: associated protein 19 (TAIR:AT2G17380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o50016|ap2s1_maize : 119.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 342.0) & (original description: no original description) 0.8903317464580957 81 evm.model.contig_4503.3 (at3g59290 : 109.0) ENTH/VHS family protein; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT2G43160.1); Has 10809 Blast hits to 8703 proteins in 640 species: Archae - 23; Bacteria - 783; Metazoa - 4592; Fungi - 2600; Plants - 971; Viruses - 59; Other Eukaryotes - 1781 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description) 0.89002664093198 83 evm.model.contig_434.2 (at4g25720 : 164.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description) 0.8899521563794233 84 evm.model.contig_2112.5 no hits & (original description: no original description) 0.8891714159191322 87 evm.model.contig_463.4 (at1g01910 : 218.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description) 0.8886569031800364 90