Sequence Description Alias PCC hrr evm.model.contig_2342.2 no hits & (original description: no original description) 0.965028257757789 4 evm.model.contig_2251.4 no hits & (original description: no original description) 0.9545649932003218 2 evm.model.contig_3415.7 no hits & (original description: no original description) 0.9508920520187848 10 evm.model.contig_2065.8 (at1g30270 : 282.0) Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9.; CBL-interacting protein kinase 23 (CIPK23); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 9 (TAIR:AT1G01140.1); Has 132391 Blast hits to 130112 proteins in 4449 species: Archae - 167; Bacteria - 15551; Metazoa - 48688; Fungi - 13416; Plants - 32041; Viruses - 531; Other Eukaryotes - 21997 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 269.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 564.0) & (original description: no original description) 0.9494613138394181 30 evm.model.contig_4553.1 no hits & (original description: no original description) 0.9491539563631552 5 evm.model.contig_2095.4 (at5g42760 : 83.6) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (reliability: 167.2) & (original description: no original description) 0.947270363728163 39 evm.model.contig_741.1 no hits & (original description: no original description) 0.9461704503932452 28 evm.model.contig_2031.12 (at5g23340 : 143.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description) 0.9461284454585568 41 evm.model.contig_3388.9 no hits & (original description: no original description) 0.9455225878080884 26 evm.model.contig_4462.5 (at4g35800 : 1580.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (gnl|cdd|68872 : 252.0) no description available & (q9mus6|rpoc1_mesvi : 128.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Mesostigma viride & (gnl|cdd|37260 : 87.4) no description available & (reliability: 3160.0) & (original description: no original description) 0.9426356272665949 38 evm.model.contig_454.6 (at3g57230 : 92.4) MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.; AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7191 Blast hits to 7190 proteins in 917 species: Archae - 0; Bacteria - 14; Metazoa - 643; Fungi - 316; Plants - 6129; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (q6ep49|mad27_orysa : 89.4) MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice) & (reliability: 184.8) & (original description: no original description) 0.9421394901144535 21 evm.model.contig_3503.1 (at5g02310 : 104.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.941610296924281 54 evm.model.contig_558.4 no hits & (original description: no original description) 0.9402450964996795 13 evm.model.contig_2131.7 (at5g49840 : 89.7) ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 32248 Blast hits to 28333 proteins in 3078 species: Archae - 765; Bacteria - 18641; Metazoa - 1800; Fungi - 1278; Plants - 1157; Viruses - 4; Other Eukaryotes - 8603 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.9387304377495715 72 evm.model.contig_3511.3 (at5g35980 : 220.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (q40532|ntf4_tobac : 132.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (reliability: 440.0) & (original description: no original description) 0.9385597375443083 15 evm.model.contig_724.2 no hits & (original description: no original description) 0.9374144109274116 16 evm.model.contig_2494.18 (at5g39440 : 152.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q75h77|sapka_orysa : 149.0) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 10) - Oryza sativa (Rice) & (reliability: 290.0) & (original description: no original description) 0.9366133479006377 17 evm.model.contig_2015.20 (at4g34030 : 216.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description) 0.9360020163694497 58 evm.model.contig_693.13 no hits & (original description: no original description) 0.935448456635779 44 evm.model.contig_3504.1 (at1g14570 : 108.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.9353348137030484 20 evm.model.contig_2044.20 no hits & (original description: no original description) 0.9339080874766265 32 evm.model.contig_2060.1 no hits & (original description: no original description) 0.9335964989789716 38 evm.model.contig_4512.6 (at2g21270 : 194.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description) 0.9323225595242844 23 evm.model.contig_2121.1 (original description: no original description) 0.9322520764831885 60 evm.model.contig_4402.15 no hits & (original description: no original description) 0.9314438086320753 71 evm.model.contig_2024.16 (p05434|catr_chlre : 126.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at5g37780 : 109.0) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9307385368936856 53 evm.model.contig_470.5 (at2g14170 : 424.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (p17202|badh_spiol : 179.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 848.0) & (original description: no original description) 0.9307019292274682 50 evm.model.contig_567.3 no hits & (original description: no original description) 0.929548347759728 28 evm.model.contig_2199.5 (at5g17230 : 298.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (p37272|psy_capan : 297.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (reliability: 596.0) & (original description: no original description) 0.9292023804529801 44 evm.model.contig_737.1 (original description: no original description) 0.9289420890736506 32 evm.model.contig_2315.1 (at5g04590 : 539.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q42997|nir_orysa : 102.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Oryza sativa (Rice) & (reliability: 1078.0) & (original description: no original description) 0.9285035984700845 31 evm.model.contig_4400.10 no hits & (original description: no original description) 0.9284290110755673 32 evm.model.contig_4402.6 no hits & (original description: no original description) 0.9263106339026471 33 evm.model.contig_4465.9 no hits & (original description: no original description) 0.9254625728950905 34 evm.model.contig_3410.2 (at4g04885 : 83.6) Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.; PCF11P-similar protein 4 (PCFS4); FUNCTIONS IN: zinc ion binding; INVOLVED IN: positive regulation of flower development, mRNA polyadenylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: shoot apical meristem, sepal, gynoecium, stamen, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), Zinc finger, C2H2-type (InterPro:IPR007087), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT1G66500.1); Has 656 Blast hits to 406 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 279; Plants - 120; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.9247949269060893 53 evm.model.contig_4426.1 no hits & (original description: no original description) 0.9242916866436067 84 evm.model.contig_639.3 (original description: no original description) 0.9241190767569848 37 evm.model.contig_547.1 (at2g26140 : 618.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 375.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1236.0) & (original description: no original description) 0.9214771181498705 50 evm.model.contig_3450.17 no hits & (original description: no original description) 0.920125560079072 39 evm.model.contig_2114.7 no hits & (original description: no original description) 0.9164815539858367 44 evm.model.contig_2290.11 no hits & (original description: no original description) 0.9160496976731196 67 evm.model.contig_3425.4 no hits & (original description: no original description) 0.9156863856832683 92 evm.model.contig_4419.12 (at1g73960 : 119.0) TBP-associated factor 2 (TAF2); FUNCTIONS IN: metallopeptidase activity, zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.9152950212076326 47 evm.model.contig_3508.5 (at1g80600 : 92.8) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.9130521984014657 54 evm.model.contig_2284.3 no hits & (original description: no original description) 0.9129995950785175 51 evm.model.contig_2301.5 no hits & (original description: no original description) 0.9122365800382208 52 evm.model.contig_479.4 no hits & (original description: no original description) 0.911775830159154 73 evm.model.contig_4467.1 (at3g13340 : 276.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). & (reliability: 552.0) & (original description: no original description) 0.9117307233873748 54 evm.model.contig_479.14 no hits & (original description: no original description) 0.9106460875284782 55 evm.model.contig_489.5 (at1g02080 : 340.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 680.0) & (original description: no original description) 0.9093416072512379 90 evm.model.contig_2027.7 no hits & (original description: no original description) 0.9083292559698999 58 evm.model.contig_4433.3 no hits & (original description: no original description) 0.907813174349565 87 evm.model.contig_4425.1 (at3g61480 : 257.0) Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT5G28350.2); Has 348 Blast hits to 320 proteins in 156 species: Archae - 0; Bacteria - 25; Metazoa - 129; Fungi - 99; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description) 0.9073345307242744 61 evm.model.contig_2190.13 (at1g07705 : 126.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.9070361048255706 64 evm.model.contig_2090.18 no hits & (original description: no original description) 0.9070243629034024 65 evm.model.contig_2076.9 (at2g15230 : 152.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.9063983065227964 85 evm.model.contig_4556.1 no hits & (original description: no original description) 0.9060867587457699 93 evm.model.contig_3388.5 (at5g19530 : 161.0) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.; ACAULIS 5 (ACL5); CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 4823 Blast hits to 4823 proteins in 1442 species: Archae - 170; Bacteria - 2608; Metazoa - 258; Fungi - 194; Plants - 443; Viruses - 0; Other Eukaryotes - 1150 (source: NCBI BLink). & (o48660|spde_nicsy : 117.0) Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Aminopropyltransferase) - Nicotiana sylvestris (Wood tobacco) & (reliability: 322.0) & (original description: no original description) 0.904865973974051 97 evm.model.contig_2069.1 no hits & (original description: no original description) 0.9030898143854599 74 evm.model.contig_532.1 (at2g27580 : 94.4) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 82.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 171.8) & (original description: no original description) 0.9025675837681395 76 evm.model.contig_4433.5 (at3g15090 : 89.7) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description) 0.9024188045427267 77 evm.model.contig_772.1 (at5g35080 : 92.4) INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.9005892086454359 81 evm.model.contig_2105.1 (at3g55410 : 968.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink). & (reliability: 1936.0) & (original description: no original description) 0.8999139755590542 82 evm.model.contig_3416.12 no hits & (original description: no original description) 0.8981095922442889 86 evm.model.contig_4458.1 (at1g54450 : 306.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 645 Blast hits to 642 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 309; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|68872 : 91.6) no description available & (reliability: 612.0) & (original description: no original description) 0.8972487003111332 89 evm.model.contig_687.1 (at3g13530 : 88.2) MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.; mitogen-activated protein kinase kinase kinase 7 (MAPKKK7); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: ovule developmental stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 6 (TAIR:AT3G07980.1); Has 137235 Blast hits to 134768 proteins in 5401 species: Archae - 190; Bacteria - 15422; Metazoa - 52001; Fungi - 13364; Plants - 33616; Viruses - 670; Other Eukaryotes - 21972 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description) 0.8965028041682866 88 evm.model.contig_2070.13 (at1g35910 : 192.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2331 Blast hits to 2325 proteins in 843 species: Archae - 41; Bacteria - 1347; Metazoa - 218; Fungi - 145; Plants - 454; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description) 0.8963320700800202 89 evm.model.contig_2040.3 (at3g60620 : 145.0) cytidinediphosphate diacylglycerol synthase 5 (CDS5); FUNCTIONS IN: phosphatidate cytidylyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 4 (TAIR:AT2G45150.1); Has 7499 Blast hits to 7495 proteins in 2619 species: Archae - 0; Bacteria - 5196; Metazoa - 180; Fungi - 139; Plants - 139; Viruses - 0; Other Eukaryotes - 1845 (source: NCBI BLink). & (gnl|cdd|68872 : 83.9) no description available & (reliability: 290.0) & (original description: no original description) 0.8961323204979788 91 evm.model.contig_503.5 (gnl|cdd|68872 : 134.0) no description available & (at5g07740 : 112.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|39774 : 82.5) no description available & (reliability: 224.0) & (original description: no original description) 0.8953179275675132 92 evm.model.contig_2687.4 (at5g10860 : 110.0) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: cobalt ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT1G47271.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8942779188054581 96 evm.model.contig_4495.10 no hits & (original description: no original description) 0.8932013667480184 98 evm.model.contig_2244.6 no hits & (original description: no original description) 0.8916946492455051 100