Sequence Description Alias PCC hrr evm.model.contig_3588.1 (at2g24765 : 187.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (o48920|arf_vigun : 170.0) ADP-ribosylation factor - Vigna unguiculata (Cowpea) & (reliability: 342.0) & (original description: no original description) 0.9447270188209144 3 evm.model.contig_544.6 (at1g18260 : 88.2) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 172.6) & (original description: no original description) 0.9319070001216991 2 evm.model.contig_3395.14 (at3g10850 : 210.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.9318318628704935 36 evm.model.contig_2033.23 no hits & (original description: no original description) 0.9151189297134386 6 evm.model.contig_3396.4 (at2g27490 : 120.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.9089779737713627 5 evm.model.contig_4461.12 no hits & (original description: no original description) 0.9068324643617983 29 evm.model.contig_2070.17 (at3g12080 : 213.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.9064166291380772 14 evm.model.contig_653.4 no hits & (original description: no original description) 0.9050923353571009 26 evm.model.contig_763.2 (at1g09770 : 221.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description) 0.8966578212407966 59 evm.model.contig_2020.27 (at1g28490 : 125.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.8957656660991414 25 evm.model.contig_3405.5 no hits & (original description: no original description) 0.893981000047269 14 evm.model.contig_3563.2 no hits & (original description: no original description) 0.8930671671133346 37 evm.model.contig_479.7 (at1g65040 : 262.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G16090.1); Has 7753 Blast hits to 7726 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2329; Fungi - 701; Plants - 3577; Viruses - 25; Other Eukaryotes - 1121 (source: NCBI BLink). & (reliability: 524.0) & (original description: no original description) 0.892475686969811 43 evm.model.contig_3384.15 no hits & (original description: no original description) 0.8919739809414178 27 evm.model.contig_2094.2 no hits & (original description: no original description) 0.8916288524435235 18 evm.model.contig_2033.15 (at1g12580 : 191.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (p53684|cdpk3_orysa : 184.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 382.0) & (original description: no original description) 0.8906434611863417 68 evm.model.contig_3601.11 (o23894|prs6a_bracm : 588.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (at3g05530 : 586.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (reliability: 1172.0) & (original description: no original description) 0.88965903411853 51 evm.model.contig_566.6 (at3g58800 : 139.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.8848103907755303 28 evm.model.contig_4413.2 no hits & (original description: no original description) 0.8846119658717772 26 evm.model.contig_462.8 no hits & (original description: no original description) 0.8839736957722368 96 evm.model.contig_4464.8 no hits & (original description: no original description) 0.882181528692326 30 evm.model.contig_498.3 (at4g08350 : 215.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description) 0.8810574615109871 62 evm.model.contig_2070.27 no hits & (original description: no original description) 0.8807959817523648 33 evm.model.contig_2132.2 no hits & (original description: no original description) 0.8806840357274063 40 evm.model.contig_3643.1 no hits & (original description: no original description) 0.8765063801437647 76 evm.model.contig_565.2 (original description: no original description) 0.8727018246622968 75 evm.model.contig_2343.2 (at2g04620 : 80.5) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8725411777936115 66 evm.model.contig_2104.14 (at5g48440 : 84.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.8707463180028517 86 evm.model.contig_2051.28 (at4g13550 : 142.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.8691150330607338 49 evm.model.contig_538.3 (p48480|pp11_acecl : 172.0) Serine/threonine-protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) - Acetabularia cliftonii (Green alga) & (at5g43380 : 168.0) encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.; type one serine/threonine protein phosphatase 6 (TOPP6); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 4 (TAIR:AT2G39840.1); Has 7210 Blast hits to 7010 proteins in 618 species: Archae - 78; Bacteria - 522; Metazoa - 2407; Fungi - 1451; Plants - 977; Viruses - 15; Other Eukaryotes - 1760 (source: NCBI BLink). & (gnl|cdd|68872 : 127.0) no description available & (reliability: 336.0) & (original description: no original description) 0.8683025870159133 65 evm.model.contig_4584.1 no hits & (original description: no original description) 0.8655930522991188 56 evm.model.contig_4443.2 no hits & (original description: no original description) 0.863561629775176 97 evm.model.contig_2275.10 no hits & (original description: no original description) 0.8633292407052996 64 evm.model.contig_2697.1 (original description: no original description) 0.8606566404107566 63 evm.model.contig_441.31 (at5g12130 : 186.0) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description) 0.8589860701083262 73 evm.model.contig_517.6 (at3g59630 : 96.7) diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description) 0.8575793519821756 94 evm.model.contig_4416.10 no hits & (original description: no original description) 0.8566409253735294 75 evm.model.contig_2068.7 no hits & (original description: no original description) 0.8556078144841328 78 evm.model.contig_2093.6 (at5g58030 : 159.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description) 0.8555419692618406 79 evm.model.contig_3683.1 no hits & (original description: no original description) 0.8551596066535417 81 evm.model.contig_2284.22 no hits & (original description: no original description) 0.8544138105913469 82 evm.model.contig_458.11 (at1g33270 : 99.4) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description) 0.8535332109293832 86 evm.model.contig_653.3 no hits & (original description: no original description) 0.8529982111977781 89 evm.model.contig_3438.2 no hits & (original description: no original description) 0.8517774102437424 92 evm.model.contig_3450.24 no hits & (original description: no original description) 0.851459332449345 95 evm.model.contig_4429.6 no hits & (original description: no original description) 0.8487033901552202 98 evm.model.contig_2281.15 (at5g08650 : 622.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe64|efgm_orysa : 102.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 1244.0) & (original description: no original description) 0.8484898560942881 99