Sequence Description Alias PCC hrr evm.model.contig_3467.8 no hits & (original description: no original description) 0.9842907186012153 1 evm.model.contig_2089.11 no hits & (original description: no original description) 0.9829979087122586 2 evm.model.contig_433.10 (at4g31600 : 168.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9762076035755416 3 evm.model.contig_3736.2 (at1g05350 : 377.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 12729 Blast hits to 12531 proteins in 2437 species: Archae - 211; Bacteria - 8204; Metazoa - 1010; Fungi - 713; Plants - 367; Viruses - 0; Other Eukaryotes - 2224 (source: NCBI BLink). & (gnl|cdd|68872 : 92.8) no description available & (reliability: 754.0) & (original description: no original description) 0.9724939153718934 11 evm.model.contig_2133.3 (at1g09020 : 90.9) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description) 0.9678151006369746 5 evm.model.contig_3394.4 (at4g13400 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G63290.1); Has 390 Blast hits to 389 proteins in 142 species: Archae - 0; Bacteria - 106; Metazoa - 14; Fungi - 122; Plants - 74; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.9666081720998796 6 evm.model.contig_2227.1 (q84ki6|sqd1_spiol : 316.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (at4g33030 : 308.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description) 0.96655021419504 14 evm.model.contig_3403.1 no hits & (original description: no original description) 0.9651026987206142 24 evm.model.contig_3565.1 no hits & (original description: no original description) 0.964273568459976 9 evm.model.contig_4430.4 (at3g06470 : 107.0) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description) 0.9631133278647875 13 evm.model.contig_2139.23 (at3g47810 : 160.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description) 0.962119794411043 25 evm.model.contig_2093.3 (at4g00680 : 84.3) actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description) 0.9602974943046118 12 evm.model.contig_3565.2 no hits & (original description: no original description) 0.9601681801463486 13 evm.model.contig_625.5 (at1g71840 : 113.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 91198 Blast hits to 35247 proteins in 911 species: Archae - 70; Bacteria - 10066; Metazoa - 38021; Fungi - 19388; Plants - 11732; Viruses - 0; Other Eukaryotes - 11921 (source: NCBI BLink). & (gnl|cdd|68872 : 95.9) no description available & (reliability: 226.0) & (original description: no original description) 0.9595738775994969 27 evm.model.contig_2118.5 (at3g45740 : 184.0) hydrolase family protein / HAD-superfamily protein; FUNCTIONS IN: copper ion binding, zinc ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, CECR5 (InterPro:IPR006353), HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357); Has 548 Blast hits to 526 proteins in 159 species: Archae - 8; Bacteria - 6; Metazoa - 128; Fungi - 307; Plants - 36; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) 0.9593199862351122 17 evm.model.contig_469.6 (at5g22330 : 584.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 1168.0) & (original description: no original description) 0.9578183112216233 35 evm.model.contig_3401.18 no hits & (original description: no original description) 0.9577894840166459 17 evm.model.contig_3537.3 (at4g39120 : 205.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (reliability: 410.0) & (original description: no original description) 0.9563920702854456 78 evm.model.contig_3577.2 no hits & (original description: no original description) 0.9560182680516193 29 evm.model.contig_3443.9 (original description: no original description) 0.9543743967710963 58 evm.model.contig_2140.2 no hits & (original description: no original description) 0.9542878569440709 21 evm.model.contig_2024.8 no hits & (original description: no original description) 0.9533963115196641 26 evm.model.contig_827.1 (at5g16070 : 650.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G02530.1); Has 18279 Blast hits to 17892 proteins in 3676 species: Archae - 807; Bacteria - 8603; Metazoa - 2077; Fungi - 1456; Plants - 829; Viruses - 0; Other Eukaryotes - 4507 (source: NCBI BLink). & (p54411|tcpe2_avesa : 224.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1300.0) & (original description: no original description) 0.9530681490956364 58 evm.model.contig_4403.16 (at5g56750 : 102.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description) 0.95266470599 63 evm.model.contig_2345.4 (at5g09810 : 108.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30165|act2_pea : 108.0) Actin-2 - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: no original description) 0.9515226076235206 48 evm.model.contig_861.2 no hits & (original description: no original description) 0.9509483148203987 26 evm.model.contig_2067.1 (at2g44050 : 97.4) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 97.1) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 194.8) & (original description: no original description) 0.9495387200046358 27 evm.model.contig_2293.7 (at3g49080 : 95.1) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.9492068510614647 28 evm.model.contig_3602.2 (at3g62120 : 532.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (reliability: 1064.0) & (original description: no original description) 0.9487258348286985 32 evm.model.contig_3397.20 (at2g19520 : 191.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description) 0.9485140357416086 42 evm.model.contig_491.1 no hits & (original description: no original description) 0.9482564562629707 85 evm.model.contig_456.3 (q9zpb7|al7a1_maldo : 453.0) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin-1) (Matured fruit 60 kDa protein) (MF-60) - Malus domestica (Apple) (Malus sylvestris) & (at1g54100 : 442.0) Aldehyde dehydrogenase; aldehyde dehydrogenase 7B4 (ALDH7B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 5F1 (TAIR:AT1G79440.1); Has 58930 Blast hits to 58766 proteins in 3009 species: Archae - 476; Bacteria - 35564; Metazoa - 2491; Fungi - 2115; Plants - 1217; Viruses - 0; Other Eukaryotes - 17067 (source: NCBI BLink). & (reliability: 884.0) & (original description: no original description) 0.9481169874697413 32 evm.model.contig_524.1 (at4g01400 : 209.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description) 0.9480254593805373 83 evm.model.contig_597.2 (at3g07100 : 419.0) Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description) 0.9479975819887912 100 evm.model.contig_2040.5 no hits & (original description: no original description) 0.9479374050712341 52 evm.model.contig_2271.5 (at5g13480 : 436.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (p93107|pf20_chlre : 98.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 872.0) & (original description: no original description) 0.9477519650525049 62 evm.model.contig_2255.6 (at3g18190 : 609.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (p40412|tcpe1_avesa : 275.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1218.0) & (original description: no original description) 0.9476577941070242 40 evm.model.contig_479.18 (at1g79230 : 149.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.9470510537594898 38 evm.model.contig_693.7 (at3g58560 : 225.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description) 0.9470214174106315 39 evm.model.contig_701.1 no hits & (original description: no original description) 0.9469753606487423 43 evm.model.contig_2139.12 (at5g49650 : 298.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 596.0) & (original description: no original description) 0.946383611850959 42 evm.model.contig_2114.16 (at5g47540 : 206.0) Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.9459688842109317 80 evm.model.contig_3425.7 (at3g11830 : 665.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (p40412|tcpe1_avesa : 246.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1330.0) & (original description: no original description) 0.9459493403176775 96 evm.model.contig_850.1 (original description: no original description) 0.9455059975171357 45 evm.model.contig_3384.20 no hits & (original description: no original description) 0.9454583120678463 98 evm.model.contig_442.5 (at4g24810 : 246.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (reliability: 492.0) & (original description: no original description) 0.9452384927238634 47 evm.model.contig_2033.1 (at3g20000 : 206.0) Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.; translocase of the outer mitochondrial membrane 40 (TOM40); FUNCTIONS IN: voltage-gated anion channel activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plasma membrane, mitochondrial outer membrane translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: Eukaryotic porin family protein (TAIR:AT1G50400.1); Has 530 Blast hits to 530 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description) 0.9435891022254642 79 evm.model.contig_527.7 (at3g57030 : 110.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.9428291519807948 49 evm.model.contig_3405.10 no hits & (original description: no original description) 0.9426105139169121 92 evm.model.contig_2084.15 (at3g14100 : 85.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.9417503127307467 51 evm.model.contig_2149.8 no hits & (original description: no original description) 0.9417287049311384 52 evm.model.contig_3440.13 (at2g39080 : 108.0) NAD(P)-binding Rossmann-fold superfamily protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 818 Blast hits to 811 proteins in 372 species: Archae - 18; Bacteria - 637; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.9410316224858846 74 evm.model.contig_4438.11 no hits & (original description: no original description) 0.9409507276324123 73 evm.model.contig_2273.9 (at2g47470 : 168.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (p38661|pdia6_medsa : 155.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 336.0) & (original description: no original description) 0.9408569989060483 55 evm.model.contig_3450.10 (q9lgr0|ssp1a_orysa : 251.0) FACT complex subunit SSRP1-A (Facilitates chromatin transcription complex subunit SSRP1-A) (Recombination signal sequence recognition protein 1-A) (Early drought-induced protein R1G1A) - Oryza sativa (Rice) & (at3g28730 : 245.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 490.0) & (original description: no original description) 0.9401014261504352 77 evm.model.contig_3577.1 (at3g23510 : 290.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.9399107766205751 71 evm.model.contig_4410.4 (at3g03710 : 563.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 1126.0) & (original description: no original description) 0.9390801682467682 70 evm.model.contig_2092.7 (at5g07460 : 122.0) ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.; peptidemethionine sulfoxide reductase 2 (PMSR2); CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 3 (TAIR:AT5G07470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9sec2|msra_lacsa : 114.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (reliability: 244.0) & (original description: no original description) 0.9389708914469407 91 evm.model.contig_2025.5 (at5g10070 : 123.0) RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description) 0.9388968667185724 61 evm.model.contig_4604.2 no hits & (original description: no original description) 0.9388603245107253 62 evm.model.contig_4402.10 (at1g25380 : 165.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (p29518|bt1_maize : 99.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 330.0) & (original description: no original description) 0.938432140148802 63 evm.model.contig_2502.5 (at3g19820 : 329.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (p93472|dim_pea : 307.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (gnl|cdd|68872 : 88.9) no description available & (reliability: 658.0) & (original description: no original description) 0.9383559556320795 75 evm.model.contig_4418.26 (at4g21470 : 97.4) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (reliability: 194.8) & (original description: no original description) 0.9381845431128298 70 evm.model.contig_499.2 no hits & (original description: no original description) 0.9374725136942351 79 evm.model.contig_713.1 (original description: no original description) 0.9374130264570801 69 evm.model.contig_2029.1 (at5g49510 : 92.8) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.937287669876717 70 evm.model.contig_4443.27 (at5g12260 : 114.0) BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.935891290772234 76 evm.model.contig_3466.1 no hits & (original description: no original description) 0.9356319958170056 75 evm.model.contig_4511.2 no hits & (original description: no original description) 0.9352613669964159 76 evm.model.contig_3537.2 no hits & (original description: no original description) 0.9350660329040033 91 evm.model.contig_2025.39 no hits & (original description: no original description) 0.9348048802721614 78 evm.model.contig_4430.3 no hits & (original description: no original description) 0.9335977081212802 79 evm.model.contig_4432.13 (at4g32530 : 222.0) ATPase, F0/V0 complex, subunit C protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: ATPase, F0/V0 complex, subunit C protein (TAIR:AT2G25610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40585|vatl_tobac : 102.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (reliability: 444.0) & (original description: no original description) 0.9332505245354916 80 evm.model.contig_2132.7 (at2g35660 : 91.3) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description) 0.9322307141680619 82 evm.model.contig_667.1 no hits & (original description: no original description) 0.9321651249321551 83 evm.model.contig_4448.10 no hits & (original description: no original description) 0.9321594258532869 93 evm.model.contig_3690.5 (at2g39770 : 439.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (reliability: 878.0) & (original description: no original description) 0.9320079914825383 85 evm.model.contig_489.2 no hits & (original description: no original description) 0.9309292333047557 87 evm.model.contig_493.22 (at1g57770 : 320.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (q2vex9|crtso_dauca : 154.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: no original description) 0.9308970940150659 88 evm.model.contig_452.15 (at3g11070 : 95.9) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: outer membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT5G05520.1); Has 1600 Blast hits to 1598 proteins in 558 species: Archae - 0; Bacteria - 789; Metazoa - 142; Fungi - 132; Plants - 78; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description) 0.9308802979298674 93 evm.model.contig_3397.12 (at4g32730 : 128.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20024|myb1_maize : 104.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 256.0) & (original description: no original description) 0.9304837079034904 91 evm.model.contig_3476.10 (at4g30600 : 304.0) signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink). & (p49969|sr542_horvu : 106.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 608.0) & (original description: no original description) 0.9300299012030675 92 evm.model.contig_4404.28 no hits & (original description: no original description) 0.9292499679187998 100