Sequence Description Alias PCC hrr evm.model.contig_2070.17 (at3g12080 : 213.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.9151913503434113 8 evm.model.contig_477.7 no hits & (original description: no original description) 0.9140961693422706 23 evm.model.contig_4458.1 (at1g54450 : 306.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 645 Blast hits to 642 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 309; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (gnl|cdd|68872 : 91.6) no description available & (reliability: 612.0) & (original description: no original description) 0.9119025072152173 57 evm.model.contig_3662.1 no hits & (original description: no original description) 0.9083742632598197 11 evm.model.contig_4404.36 no hits & (original description: no original description) 0.906556561517583 35 evm.model.contig_4448.5 no hits & (original description: no original description) 0.9059413933280035 6 evm.model.contig_2154.9 no hits & (original description: no original description) 0.905320427676616 7 evm.model.contig_2275.11 no hits & (original description: no original description) 0.9038457045017605 84 evm.model.contig_3384.18 no hits & (original description: no original description) 0.902634448435112 83 evm.model.contig_3598.5 (at5g40440 : 135.0) encodes a mitogen-activated protein kinase kinase; mitogen-activated protein kinase kinase 3 (MKK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 6 (TAIR:AT5G56580.1); Has 122843 Blast hits to 121436 proteins in 4056 species: Archae - 133; Bacteria - 13736; Metazoa - 45702; Fungi - 12099; Plants - 30883; Viruses - 510; Other Eukaryotes - 19780 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 133.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 248.0) & (original description: no original description) 0.8994105738152849 15 evm.model.contig_4501.6 no hits & (original description: no original description) 0.8986661460896516 34 evm.model.contig_2090.39 (at3g26570 : 230.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.898497597419019 78 evm.model.contig_578.3 no hits & (original description: no original description) 0.8966817440670262 80 evm.model.contig_3416.12 no hits & (original description: no original description) 0.8944493704006229 67 evm.model.contig_569.1 (at3g27380 : 322.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) & (original description: no original description) 0.8932501250410309 16 evm.model.contig_2090.18 no hits & (original description: no original description) 0.888757325533556 95 evm.model.contig_2085.17 (q851x7|derl2_orysa : 202.0) Derlin-2 (OsDerlin 2-1) - Oryza sativa (Rice) & (at4g04860 : 201.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 386.0) & (original description: no original description) 0.8885259840335457 96 evm.model.contig_2275.10 no hits & (original description: no original description) 0.8866704011361717 29 evm.model.contig_2177.6 (at4g32390 : 129.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT2G25520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.886008078398146 49 evm.model.contig_714.2 no hits & (original description: no original description) 0.8819528311562366 47 evm.model.contig_533.3 (p16868|h2b4_volca : 127.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at2g28720 : 123.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 3535 Blast hits to 3431 proteins in 349 species: Archae - 0; Bacteria - 57; Metazoa - 2253; Fungi - 226; Plants - 491; Viruses - 2; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.8809141567540187 65 evm.model.contig_3563.2 no hits & (original description: no original description) 0.8775983036478303 62 evm.model.contig_2104.14 (at5g48440 : 84.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.8734094402108362 77 evm.model.contig_542.3 no hits & (original description: no original description) 0.8728158240955666 71 evm.model.contig_743.1 (p51615|maox_vitvi : 495.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at2g19900 : 490.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.; NADP-malic enzyme 1 (NADP-ME1); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: embryo, sperm cell, root, stamen, seed; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9392 Blast hits to 9373 proteins in 2414 species: Archae - 143; Bacteria - 6244; Metazoa - 609; Fungi - 220; Plants - 469; Viruses - 0; Other Eukaryotes - 1707 (source: NCBI BLink). & (reliability: 980.0) & (original description: no original description) 0.8707563160692603 72 evm.model.contig_2243.1 no hits & (original description: no original description) 0.86743733887714 62 evm.model.contig_2178.2 no hits & (original description: no original description) 0.866432530966947 71 evm.model.contig_3450.27 (at4g00660 : 615.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41379|if4a2_nicpl : 268.0) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1230.0) & (original description: no original description) 0.8646018301548178 59 evm.model.contig_3573.7 no hits & (original description: no original description) 0.8613944300916239 64 evm.model.contig_2020.27 (at1g28490 : 125.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.8572894046384403 76 evm.model.contig_4456.26 (at5g11680 : 96.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.853344861513163 90 evm.model.contig_3701.2 (at3g45630 : 157.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (gnl|cdd|68872 : 98.2) no description available & (reliability: 308.0) & (original description: no original description) 0.8514550160646849 95 evm.model.contig_4424.8 no hits & (original description: no original description) 0.8506402325820364 98