Sequence Description Alias PCC hrr evm.model.contig_2296.13 no hits & (original description: no original description) 0.9203382096224658 4 evm.model.contig_4447.4 (at2g20650 : 293.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description) 0.9141245543007335 2 evm.model.contig_3478.12 (at2g41140 : 114.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 111.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 228.0) & (original description: no original description) 0.9066670495048881 8 evm.model.contig_2272.6 no hits & (original description: no original description) 0.9057040107554447 13 evm.model.contig_2039.2 no hits & (original description: no original description) 0.90314927804956 12 evm.model.contig_2575.1 no hits & (original description: no original description) 0.9018805031477203 6 evm.model.contig_2149.9 no hits & (original description: no original description) 0.8935721661388971 14 evm.model.contig_2036.9 (original description: no original description) 0.8914099893940075 8 evm.model.contig_2238.1 no hits & (original description: no original description) 0.8882500453356021 19 evm.model.contig_4416.5 no hits & (original description: no original description) 0.884418298399424 16 evm.model.contig_2672.1 (at2g25170 : 447.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 397.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 892.0) & (original description: no original description) 0.8829389296115688 38 evm.model.contig_2238.2 no hits & (original description: no original description) 0.8808356391922053 21 evm.model.contig_2080.5 no hits & (original description: no original description) 0.874853825688713 16 evm.model.contig_4475.3 no hits & (original description: no original description) 0.8743643106531961 24 evm.model.contig_3528.3 no hits & (original description: no original description) 0.873296478890468 37 evm.model.contig_2421.9 (at5g39710 : 153.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description) 0.871821931697796 59 evm.model.contig_2279.17 (at5g58490 : 112.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51104|dfra_diaca : 101.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 214.0) & (original description: no original description) 0.8671022020431681 17 evm.model.contig_2036.12 no hits & (original description: no original description) 0.8670481906354701 32 evm.model.contig_4524.1 (original description: no original description) 0.8666968724042019 28 evm.model.contig_4475.2 no hits & (original description: no original description) 0.8641038302544373 20 evm.model.contig_3601.2 no hits & (original description: no original description) 0.8578779880469289 21 evm.model.contig_2190.6 no hits & (original description: no original description) 0.8537102955433579 27 evm.model.contig_4740.1 no hits & (original description: no original description) 0.8516388329651007 45 evm.model.contig_2719.1 (gnl|cdd|68872 : 113.0) no description available & (at4g04540 : 111.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (CRK39); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (TAIR:AT4G04570.1); Has 125664 Blast hits to 124100 proteins in 4695 species: Archae - 110; Bacteria - 14484; Metazoa - 46060; Fungi - 11047; Plants - 34830; Viruses - 446; Other Eukaryotes - 18687 (source: NCBI BLink). & (q8l4h4|nork_medtr : 86.7) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 214.0) & (original description: no original description) 0.8491413983659659 32 evm.model.contig_538.6 (at5g10840 : 310.0) Endomembrane protein 70 protein family; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G25100.1); Has 1652 Blast hits to 1622 proteins in 358 species: Archae - 0; Bacteria - 81; Metazoa - 616; Fungi - 232; Plants - 453; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description) 0.845896155482941 40 evm.model.contig_2223.1 no hits & (original description: no original description) 0.8438417443335009 26 evm.model.contig_2045.8 (original description: no original description) 0.843074456750928 27 evm.model.contig_577.8 no hits & (original description: no original description) 0.8413282223822021 28 evm.model.contig_498.8 no hits & (original description: no original description) 0.8411294595005324 95 evm.model.contig_530.7 no hits & (original description: no original description) 0.8399701839626623 30 evm.model.contig_3402.10 (at3g29020 : 96.3) Encodes a putative transcription factor (MYB110).; myb domain protein 110 (MYB110); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 8245 Blast hits to 7670 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 732; Fungi - 497; Plants - 5174; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.8364689481705715 32 evm.model.contig_2133.1 no hits & (original description: no original description) 0.8343476099331336 35 evm.model.contig_2315.5 no hits & (original description: no original description) 0.8335249753774576 36 evm.model.contig_2348.4 no hits & (original description: no original description) 0.825733670488508 53 evm.model.contig_4638.1 no hits & (original description: no original description) 0.8231090958737501 41 evm.model.contig_4483.6 no hits & (original description: no original description) 0.8217167157240333 88 evm.model.contig_431.4 (at1g18890 : 114.0) encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.; calcium-dependent protein kinase 1 (CDPK1); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 125370 Blast hits to 119826 proteins in 3847 species: Archae - 176; Bacteria - 14154; Metazoa - 46310; Fungi - 16874; Plants - 24900; Viruses - 438; Other Eukaryotes - 22518 (source: NCBI BLink). & (q75v63|sapk3_orysa : 104.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (reliability: 212.0) & (original description: no original description) 0.8195227598609544 43 evm.model.contig_530.6 no hits & (original description: no original description) 0.8157663015924005 46 evm.model.contig_3573.3 no hits & (original description: no original description) 0.8144183956056638 47 evm.model.contig_865.4 no hits & (original description: no original description) 0.8144069397794752 58 evm.model.contig_2179.7 no hits & (original description: no original description) 0.8133758400941928 49 evm.model.contig_2447.1 no hits & (original description: no original description) 0.813207272374654 50 evm.model.contig_2072.9 no hits & (original description: no original description) 0.810781606181495 51 evm.model.contig_4483.5 (at2g38770 : 205.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 410.0) & (original description: no original description) 0.8100766107280323 52 evm.model.contig_3538.1 no hits & (original description: no original description) 0.8095720389682931 56 evm.model.contig_2036.10 (original description: no original description) 0.8076818506214662 54 evm.model.contig_4538.2 no hits & (original description: no original description) 0.8071302506742735 92 evm.model.contig_438.8 no hits & (original description: no original description) 0.804213220203419 100 evm.model.contig_2089.12 no hits & (original description: no original description) 0.7987942131094021 59 evm.model.contig_2163.1 no hits & (original description: no original description) 0.795015567844126 61 evm.model.contig_4606.1 (original description: no original description) 0.7941818431145042 62 evm.model.contig_2033.8 no hits & (original description: no original description) 0.793725492361436 63 evm.model.contig_544.3 no hits & (original description: no original description) 0.7909179658133959 98 evm.model.contig_2095.8 no hits & (original description: no original description) 0.790828171226337 65 evm.model.contig_532.9 (at3g52940 : 272.0) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.; FACKEL (FK); FUNCTIONS IN: delta14-sterol reductase activity; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT1G50430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 544.0) & (original description: no original description) 0.7903529172625118 66 evm.model.contig_3423.17 no hits & (original description: no original description) 0.7896762330215921 72 evm.model.contig_3635.2 no hits & (original description: no original description) 0.7876564953948277 92 evm.model.contig_620.3 no hits & (original description: no original description) 0.7866018720715319 85 evm.model.contig_3465.1 no hits & (original description: no original description) 0.7847159087458259 97 evm.model.contig_4416.12 no hits & (original description: no original description) 0.7747410082431831 86 evm.model.contig_2190.15 no hits & (original description: no original description) 0.7676462384102927 92 evm.model.contig_447.11 (p51173|apea_dicdi : 164.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (at2g41460 : 147.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.7643918839150611 94 evm.model.contig_2056.8 no hits & (original description: no original description) 0.761118068200564 98 evm.model.contig_4619.4 no hits & (original description: no original description) 0.7608952086199374 99