Sequence Description Alias PCC hrr evm.model.contig_462.15 no hits & (original description: no original description) 0.9463056441689155 1 evm.model.contig_724.4 no hits & (original description: no original description) 0.9118389046512339 4 evm.model.contig_3508.2 (at5g51540 : 334.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT1G67690.1); Has 5499 Blast hits to 5482 proteins in 1556 species: Archae - 6; Bacteria - 3417; Metazoa - 330; Fungi - 489; Plants - 134; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 668.0) & (original description: no original description) 0.9044810798928793 13 evm.model.contig_4412.1 no hits & (original description: no original description) 0.9041623973921697 52 evm.model.contig_4506.4 (at4g24040 : 240.0) Encodes a trehalase, member of Glycoside Hydrolase Family 37.; trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description) 0.9026515296275174 12 evm.model.contig_2277.6 no hits & (original description: no original description) 0.8999314599597278 33 evm.model.contig_491.3 no hits & (original description: no original description) 0.8910581122072568 51 evm.model.contig_2190.12 no hits & (original description: no original description) 0.8895686904371738 51 evm.model.contig_559.3 no hits & (original description: no original description) 0.8878500616758487 15 evm.model.contig_2343.14 (at3g57550 : 155.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description) 0.8871341371901895 11 evm.model.contig_2086.3 (at4g29540 : 126.0) bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description) 0.8844343117391025 12 evm.model.contig_2025.8 (at4g02790 : 246.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YlqF (InterPro:IPR019991); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 492.0) & (original description: no original description) 0.8822249429357847 35 evm.model.contig_3491.6 no hits & (original description: no original description) 0.8805697946037022 36 evm.model.contig_455.2 (at3g17465 : 157.0) encodes a putative L3 ribosomal protein targeted to the plastid.; ribosomal protein L3 plastid (RPL3P); CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L3 family protein (TAIR:AT2G43030.1); Has 8719 Blast hits to 8719 proteins in 2855 species: Archae - 267; Bacteria - 5444; Metazoa - 136; Fungi - 140; Plants - 91; Viruses - 0; Other Eukaryotes - 2641 (source: NCBI BLink). & (o80360|rk3_tobac : 117.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 314.0) & (original description: no original description) 0.8761494476722583 40 evm.model.contig_3726.1 no hits & (original description: no original description) 0.8761383973746516 19 evm.model.contig_2304.1 no hits & (original description: no original description) 0.8730124671774064 21 evm.model.contig_4446.8 no hits & (original description: no original description) 0.8706678030512983 23 evm.model.contig_3384.2 no hits & (original description: no original description) 0.869799094274495 24 evm.model.contig_2357.4 no hits & (original description: no original description) 0.8675236438687098 28 evm.model.contig_3525.2 no hits & (original description: no original description) 0.8662364122952527 36 evm.model.contig_2621.3 no hits & (original description: no original description) 0.8624343761558853 80 evm.model.contig_2121.3 no hits & (original description: no original description) 0.8619798874424484 86 evm.model.contig_2126.8 no hits & (original description: no original description) 0.8609108353004952 33 evm.model.contig_3841.1 (at1g18090 : 245.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 101.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 456.0) & (original description: no original description) 0.8574069258193884 89 evm.model.contig_2126.16 (at5g39840 : 308.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description) 0.851472197940701 43 evm.model.contig_2147.2 no hits & (original description: no original description) 0.8462230514690237 56 evm.model.contig_716.2 (o24578|pura_maize : 382.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) - Zea mays (Maize) & (at3g57610 : 380.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description) 0.8451963625000403 60 evm.model.contig_444.18 no hits & (original description: no original description) 0.839930465998857 74 evm.model.contig_508.3 no hits & (original description: no original description) 0.8376201927309589 84 evm.model.contig_469.17 no hits & (original description: no original description) 0.8345449526927666 87 evm.model.contig_3508.6 no hits & (original description: no original description) 0.8339964523933198 91 evm.model.contig_2185.5 (at3g48190 : 373.0) encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; ataxia-telangiectasia mutated (ATM); FUNCTIONS IN: 1-phosphatidylinositol-3-phosphate 5-kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Ataxia-Telangiectasia Mutated (InterPro:IPR015519), PIK-related kinase (InterPro:IPR014009), PWWP (InterPro:IPR000313), PIK-related kinase, FATC (InterPro:IPR003152), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 3479 Blast hits to 3364 proteins in 268 species: Archae - 0; Bacteria - 7; Metazoa - 1400; Fungi - 858; Plants - 531; Viruses - 0; Other Eukaryotes - 683 (source: NCBI BLink). & (q5z987|atr_orysa : 206.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (gnl|cdd|68872 : 165.0) no description available & (gnl|cdd|39774 : 84.8) no description available & (reliability: 746.0) & (original description: no original description) 0.8308764226140158 98 evm.model.contig_493.24 no hits & (original description: no original description) 0.8308331322017781 99 evm.model.contig_2034.17 no hits & (original description: no original description) 0.8300519431711664 100