Sequence Description Alias PCC hrr evm.model.contig_467.6 no hits & (original description: no original description) 0.9653237588841879 5 evm.model.contig_751.2 no hits & (original description: no original description) 0.962755374571633 2 evm.model.contig_2068.22 no hits & (original description: no original description) 0.9588994878940579 3 evm.model.contig_2157.4 no hits & (original description: no original description) 0.9560636507352693 4 evm.model.contig_444.31 (original description: no original description) 0.9527726873976309 12 evm.model.contig_3401.3 no hits & (original description: no original description) 0.9526328194968535 14 evm.model.contig_2096.17 (at2g42160 : 83.2) BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.9506456652077325 7 evm.model.contig_3531.1 (at3g49370 : 120.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 120826 Blast hits to 119042 proteins in 3470 species: Archae - 178; Bacteria - 14958; Metazoa - 45068; Fungi - 12844; Plants - 26097; Viruses - 535; Other Eukaryotes - 21146 (source: NCBI BLink). & (p53681|crk_dauca : 112.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 238.0) & (original description: no original description) 0.9499864508916831 8 evm.model.contig_2500.5 no hits & (original description: no original description) 0.9467336110874895 9 evm.model.contig_3401.8 no hits & (original description: no original description) 0.9441925606775095 10 evm.model.contig_2298.2 no hits & (original description: no original description) 0.9431779770006103 11 evm.model.contig_4478.2 (at2g32240 : 147.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (q9m7j4|mfp1_tobac : 85.1) MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) & (reliability: 294.0) & (original description: no original description) 0.9425907721772993 12 evm.model.contig_2707.2 no hits & (original description: no original description) 0.940998632637691 20 evm.model.contig_4424.5 no hits & (original description: no original description) 0.9377016730655482 14 evm.model.contig_2116.6 no hits & (original description: no original description) 0.9353755439732296 16 evm.model.contig_527.2 no hits & (original description: no original description) 0.934557601193464 26 evm.model.contig_2083.7 no hits & (original description: no original description) 0.9332834710169537 17 evm.model.contig_2239.3 (at5g18640 : 122.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.9329247081134256 18 evm.model.contig_2286.2 no hits & (original description: no original description) 0.9291555399455463 19 evm.model.contig_3442.5 no hits & (original description: no original description) 0.9281284676119095 20 evm.model.contig_3401.12 no hits & (original description: no original description) 0.9272770783433404 41 evm.model.contig_623.5 no hits & (original description: no original description) 0.9267734047521454 24 evm.model.contig_2092.5 no hits & (original description: no original description) 0.9264742009503358 23 evm.model.contig_503.13 (at5g61460 : 315.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 630.0) & (original description: no original description) 0.9234907113432375 45 evm.model.contig_499.4 (at1g65540 : 290.0) LETM1-like protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G59820.1); Has 7253 Blast hits to 6279 proteins in 764 species: Archae - 76; Bacteria - 1084; Metazoa - 3311; Fungi - 589; Plants - 471; Viruses - 24; Other Eukaryotes - 1698 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.9209831108066294 25 evm.model.contig_2284.15 no hits & (original description: no original description) 0.9208616754307469 86 evm.model.contig_2445.5 no hits & (original description: no original description) 0.91881006413138 32 evm.model.contig_2262.6 no hits & (original description: no original description) 0.9185771222495523 42 evm.model.contig_2056.1 (at5g14660 : 149.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.918499614087237 29 evm.model.contig_814.1 (at5g27660 : 177.0) Trypsin family protein with PDZ domain; FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 16463 Blast hits to 16423 proteins in 2614 species: Archae - 115; Bacteria - 10782; Metazoa - 377; Fungi - 151; Plants - 529; Viruses - 0; Other Eukaryotes - 4509 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.9158799646689821 80 evm.model.contig_2112.5 no hits & (original description: no original description) 0.9148064184333432 31 evm.model.contig_3405.2 no hits & (original description: no original description) 0.913991994721675 83 evm.model.contig_2494.34 no hits & (original description: no original description) 0.9136344864282983 65 evm.model.contig_2347.5 no hits & (original description: no original description) 0.9127954665067523 35 evm.model.contig_4454.6 no hits & (original description: no original description) 0.9120558523736961 35 evm.model.contig_458.6 (at5g01230 : 276.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: FtsJ-like methyltransferase family protein (TAIR:AT4G25730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description) 0.9115609963148484 36 evm.model.contig_542.8 (at5g08415 : 384.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 768.0) & (original description: no original description) 0.9108785037288482 37 evm.model.contig_2085.13 no hits & (original description: no original description) 0.9100896467735698 38 evm.model.contig_480.1 (original description: no original description) 0.9083765235022598 47 evm.model.contig_4492.1 (at4g08550 : 107.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description) 0.9083612225171659 40 evm.model.contig_2357.3 no hits & (original description: no original description) 0.9066103375461688 41 evm.model.contig_2142.2 no hits & (original description: no original description) 0.9060636763252629 56 evm.model.contig_2291.6 no hits & (original description: no original description) 0.905150517010409 45 evm.model.contig_2296.15 no hits & (original description: no original description) 0.9047695415283507 77 evm.model.contig_493.4 no hits & (original description: no original description) 0.9047103975216692 47 evm.model.contig_2064.7 no hits & (original description: no original description) 0.9046275556114542 48 evm.model.contig_503.2 (at3g13235 : 204.0) ubiquitin family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase aspartic (InterPro:IPR021109), Ubiquitin subgroup (InterPro:IPR019956), Peptidase aspartic, eukaryotic predicted (InterPro:IPR019103), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A, retrovirus, catalytic (InterPro:IPR001995), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060). & (reliability: 408.0) & (original description: no original description) 0.9046212570100892 49 evm.model.contig_444.23 no hits & (original description: no original description) 0.9044343981100237 51 evm.model.contig_4423.3 no hits & (original description: no original description) 0.9037679902510436 52 evm.model.contig_3412.3 no hits & (original description: no original description) 0.9035637995715204 53 evm.model.contig_3550.2 (original description: no original description) 0.9028797199081476 54 evm.model.contig_504.15 no hits & (original description: no original description) 0.9017903191614274 56 evm.model.contig_3468.7 no hits & (original description: no original description) 0.9008340686524587 58 evm.model.contig_4438.20 (at3g44680 : 541.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (p56521|hdac_maize : 513.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1082.0) & (original description: no original description) 0.9005050222263067 72 evm.model.contig_542.13 (at1g09280 : 85.9) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9001199109915174 60 evm.model.contig_3800.4 (at5g55260 : 384.0) Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.; protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 352.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 768.0) & (original description: no original description) 0.9000194214355315 61 evm.model.contig_3485.1 (at3g06620 : 147.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 125703 Blast hits to 124182 proteins in 4625 species: Archae - 237; Bacteria - 14697; Metazoa - 46775; Fungi - 11283; Plants - 33084; Viruses - 499; Other Eukaryotes - 19128 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 91.3) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: no original description) 0.8997023556881114 63 evm.model.contig_2098.9 (at3g62270 : 130.0) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.8994860673265167 64 evm.model.contig_4450.1 no hits & (original description: no original description) 0.8982963145749083 65 evm.model.contig_2282.4 (at4g01660 : 451.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (reliability: 902.0) & (original description: no original description) 0.8980631815293005 66 evm.model.contig_454.18 no hits & (original description: no original description) 0.8971320457274168 68 evm.model.contig_2492.4 no hits & (original description: no original description) 0.8970214166338576 71 evm.model.contig_3521.4 no hits & (original description: no original description) 0.8966851641605071 70 evm.model.contig_2494.36 (at5g06680 : 153.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.8936186306584083 75 evm.model.contig_2020.31 (at4g39150 : 126.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (reliability: 252.0) & (original description: no original description) 0.8930848043274152 88 evm.model.contig_3545.2 (at4g36650 : 89.7) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.8905944457621008 80 evm.model.contig_482.14 no hits & (original description: no original description) 0.8904639450826654 81 evm.model.contig_4468.3 no hits & (original description: no original description) 0.8892841341466531 82 evm.model.contig_2282.18 no hits & (original description: no original description) 0.8878325347335623 85 evm.model.contig_4456.16 no hits & (original description: no original description) 0.8875500474574467 86 evm.model.contig_3698.4 no hits & (original description: no original description) 0.8871997941064196 87 evm.model.contig_3531.2 (at4g36800 : 201.0) RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.; RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). & (p35130|ubc2_medsa : 85.5) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 370.0) & (original description: no original description) 0.8871406536719961 88 evm.model.contig_2017.2 no hits & (original description: no original description) 0.8865433386844334 89 evm.model.contig_2088.8 no hits & (original description: no original description) 0.8860882049714686 90 evm.model.contig_510.11 no hits & (original description: no original description) 0.8859012011759229 91 evm.model.contig_538.4 no hits & (original description: no original description) 0.8852416445465178 93 evm.model.contig_2359.6 no hits & (original description: no original description) 0.8838137408367098 95 evm.model.contig_2020.12 no hits & (original description: no original description) 0.8834665590747004 96 evm.model.contig_604.4 no hits & (original description: no original description) 0.8824256780475597 97 evm.model.contig_2315.3 (at4g35760 : 124.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.8823246783715712 98