Sequence Description Alias PCC hrr evm.model.contig_2687.3 no hits & (original description: no original description) 0.8383218494001323 7 evm.model.contig_558.2 no hits & (original description: no original description) 0.8376527530949452 60 evm.model.contig_506.7 (at5g27920 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G01720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8368876597511216 21 evm.model.contig_510.15 no hits & (original description: no original description) 0.8276590702604419 22 evm.model.contig_2216.4 no hits & (original description: no original description) 0.8235014654492583 12 evm.model.contig_540.3 no hits & (original description: no original description) 0.8221206486733573 46 evm.model.contig_2025.40 (at1g78010 : 187.0) tRNA modification GTPase, putative; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: small GTPase mediated signal transduction, tRNA modification; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), tRNA modification GTPase TrmE (InterPro:IPR004520), GTP-binding protein TrmE, N-terminal (InterPro:IPR018948), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 37224 Blast hits to 31482 proteins in 3092 species: Archae - 387; Bacteria - 27903; Metazoa - 467; Fungi - 287; Plants - 322; Viruses - 0; Other Eukaryotes - 7858 (source: NCBI BLink). & (reliability: 374.0) & (original description: no original description) 0.8191087653939704 97 evm.model.contig_489.3 (at2g21150 : 211.0) XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.; XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, response to blue light, response to red light, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has 1721 Blast hits to 1474 proteins in 237 species: Archae - 2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85; Viruses - 22; Other Eukaryotes - 768 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.8148195500877405 19 evm.model.contig_3523.2 no hits & (original description: no original description) 0.8128567360720537 92 evm.model.contig_606.2 (at3g21070 : 186.0) Encodes a protein with NAD(H) kinase activity.; NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5jk52|nadk1_orysa : 175.0) Probable NAD kinase 1 (EC 2.7.1.23) - Oryza sativa (Rice) & (reliability: 372.0) & (original description: no original description) 0.8082053557707612 68 evm.model.contig_2109.2 no hits & (original description: no original description) 0.8065465927653809 14 evm.model.contig_4419.13 no hits & (original description: no original description) 0.8060869858449908 37 evm.model.contig_4448.13 no hits & (original description: no original description) 0.8026970278322089 36 evm.model.contig_2706.3 (at5g08335 : 129.0) Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.; ATSTE14B; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); BEST Arabidopsis thaliana protein match is: homolog of yeast STE14 A (TAIR:AT5G23320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.7983325770792143 23 evm.model.contig_2019.23 (at5g36170 : 343.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (reliability: 686.0) & (original description: no original description) 0.7968351645923241 17 evm.model.contig_2310.2 no hits & (original description: no original description) 0.7962907872895729 25 evm.model.contig_2663.6 no hits & (original description: no original description) 0.7943659324860817 66 evm.model.contig_2157.7 no hits & (original description: no original description) 0.7940252016122723 84 evm.model.contig_613.4 no hits & (original description: no original description) 0.793069632503472 22 evm.model.contig_2109.4 no hits & (original description: no original description) 0.7899172847332886 24 evm.model.contig_4578.1 no hits & (original description: no original description) 0.7878367719206127 88 evm.model.contig_2356.2 (at1g48950 : 83.6) C3HC zinc finger-like ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935); BEST Arabidopsis thaliana protein match is: IAP-like protein 1 (TAIR:AT1G17210.1); Has 249 Blast hits to 238 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 80; Plants - 75; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.7862405685926058 53 evm.model.contig_3532.1 no hits & (original description: no original description) 0.7845512107554921 77 evm.model.contig_47.1 (at3g06810 : 149.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.7834600402338723 40 evm.model.contig_2126.8 no hits & (original description: no original description) 0.7798503881344828 98 evm.model.contig_573.4 no hits & (original description: no original description) 0.7789545797147736 53 evm.model.contig_2172.6 no hits & (original description: no original description) 0.7780061020144704 43 evm.model.contig_2296.3 (at3g59410 : 150.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (reliability: 300.0) & (original description: no original description) 0.7767195016030999 81 evm.model.contig_625.3 (at4g26430 : 101.0) one of two genes encoding subunit 6 of COP9 signalosome complex; COP9 signalosome subunit 6B (CSN6B); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6A (TAIR:AT5G56280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.7745778617039406 75 evm.model.contig_2706.8 no hits & (original description: no original description) 0.7725909867064826 86 evm.model.contig_2316.3 (original description: no original description) 0.7652557668893812 95 evm.model.contig_4432.19 no hits & (original description: no original description) 0.7608190469827679 48 evm.model.contig_2248.1 (at2g47980 : 116.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description) 0.7597190500801441 83 evm.model.contig_2139.15 no hits & (original description: no original description) 0.7574278005570292 53 evm.model.contig_2288.15 (at3g09360 : 155.0) Cyclin/Brf1-like TBP-binding protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 20615 Blast hits to 13314 proteins in 1023 species: Archae - 483; Bacteria - 1191; Metazoa - 7169; Fungi - 2226; Plants - 882; Viruses - 261; Other Eukaryotes - 8403 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description) 0.7556905686927802 55 evm.model.contig_2139.6 no hits & (original description: no original description) 0.7554984665154139 56 evm.model.contig_2096.19 (at3g43790 : 115.0) zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description) 0.7473250936953953 96 evm.model.contig_2279.12 (original description: no original description) 0.7465376468677021 77 evm.model.contig_2270.3 no hits & (original description: no original description) 0.7447223467083732 79 evm.model.contig_4425.2 (p43284|trpb2_maize : 616.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (at5g54810 : 609.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1218.0) & (original description: no original description) 0.7411543081688691 77 evm.model.contig_3407.8 (at5g08450 : 105.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.7410004316493602 100 evm.model.contig_2359.1 no hits & (original description: no original description) 0.738535742720762 80 evm.model.contig_2343.10 no hits & (original description: no original description) 0.7342941278002775 86 evm.model.contig_2051.37 (at2g40690 : 299.0) Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.; GLY1; FUNCTIONS IN: glycerol-3-phosphate dehydrogenase [NAD+] activity; INVOLVED IN: systemic acquired resistance, glycerol-3-phosphate metabolic process, glycerolipid biosynthetic process, glycerolipid metabolic process; LOCATED IN: glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT5G40610.1); Has 8663 Blast hits to 8662 proteins in 2795 species: Archae - 24; Bacteria - 5277; Metazoa - 643; Fungi - 297; Plants - 161; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description) 0.7332579136010327 87 evm.model.contig_522.6 no hits & (original description: no original description) 0.730936012702443 93