Sequence Description Alias PCC hrr evm.model.contig_606.9 no hits & (original description: no original description) 0.9691300731493431 2 evm.model.contig_2024.13 no hits & (original description: no original description) 0.9610725524837773 2 evm.model.contig_514.1 (at1g53400 : 88.2) Ubiquitin domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin domain-containing protein (TAIR:AT5G45740.1); Has 319 Blast hits to 318 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 63; Plants - 89; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description) 0.9510054974770513 5 evm.model.contig_2065.2 (at5g12190 : 82.8) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G14870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.9500904971172642 4 evm.model.contig_493.26 no hits & (original description: no original description) 0.9419105124227917 5 evm.model.contig_2246.3 no hits & (original description: no original description) 0.9403073728742738 7 evm.model.contig_690.2 no hits & (original description: no original description) 0.9368020373687768 7 evm.model.contig_458.3 (at3g49180 : 90.9) ROOT INITIATION DEFECTIVE 3 (RID3); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 42486 Blast hits to 21489 proteins in 714 species: Archae - 48; Bacteria - 7251; Metazoa - 15456; Fungi - 9258; Plants - 4698; Viruses - 0; Other Eukaryotes - 5775 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description) 0.9360976930442776 8 evm.model.contig_3452.5 (at3g04710 : 100.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (reliability: 200.0) & (original description: no original description) 0.9303926105221215 9 evm.model.contig_4405.5 no hits & (original description: no original description) 0.9256227607552763 16 evm.model.contig_2032.29 (at1g78620 : 146.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description) 0.9217780230784168 16 evm.model.contig_4407.12 no hits & (original description: no original description) 0.9134046138614986 12 evm.model.contig_3396.6 (at5g08415 : 349.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description) 0.9112938141917604 19 evm.model.contig_2272.4 (at3g13550 : 140.0) Encodes a protein similar to ubiquitin-conjugating enzyme (E2) variant proteins (UEV); lacks catalytic cysteine residue found in ubiquitin-conjugating enzyme E2. Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 9 (FUS9); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.9110707269497672 14 evm.model.contig_2284.12 no hits & (original description: no original description) 0.9076755546207184 35 evm.model.contig_554.7 (at3g12150 : 159.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description) 0.9029607454104702 52 evm.model.contig_2067.2 no hits & (original description: no original description) 0.9013745475307009 26 evm.model.contig_4461.10 no hits & (original description: no original description) 0.9011792361321863 24 evm.model.contig_747.3 no hits & (original description: no original description) 0.9010861439797319 42 evm.model.contig_4448.4 no hits & (original description: no original description) 0.8976540834920449 55 evm.model.contig_2446.2 no hits & (original description: no original description) 0.8964355880894401 33 evm.model.contig_590.3 no hits & (original description: no original description) 0.8955296235383629 53 evm.model.contig_2292.7 (at1g44170 : 343.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (p17202|badh_spiol : 128.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 686.0) & (original description: no original description) 0.8949598100513818 23 evm.model.contig_2468.8 no hits & (original description: no original description) 0.8948780863413247 24 evm.model.contig_2687.2 (at5g02710 : 112.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8946693715556695 25 evm.model.contig_2044.33 (at1g26520 : 151.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 8517 Blast hits to 8427 proteins in 1716 species: Archae - 88; Bacteria - 6047; Metazoa - 151; Fungi - 280; Plants - 232; Viruses - 0; Other Eukaryotes - 1719 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description) 0.8945690427506567 26 evm.model.contig_2032.13 (at5g24840 : 177.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: acetate biosynthetic process from carbon monoxide, methanol oxidation, tRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.8935944663655674 27 evm.model.contig_765.2 no hits & (original description: no original description) 0.8924379412015329 28 evm.model.contig_580.1 (at5g19180 : 310.0) Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.; E1 C-terminal related 1 (ECR1); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), E2 binding (InterPro:IPR014929); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) & (original description: no original description) 0.891932747952604 39 evm.model.contig_804.1 no hits & (original description: no original description) 0.8895764211325451 30 evm.model.contig_2324.3 no hits & (original description: no original description) 0.8883767579553805 68 evm.model.contig_2386.1 no hits & (original description: no original description) 0.887472196417507 32 evm.model.contig_4427.7 no hits & (original description: no original description) 0.8867131343387675 33 evm.model.contig_3452.9 no hits & (original description: no original description) 0.8861236670785869 34 evm.model.contig_537.2 no hits & (original description: no original description) 0.8856620256234438 83 evm.model.contig_2041.2 no hits & (original description: no original description) 0.8847914150552996 36 evm.model.contig_2027.6 no hits & (original description: no original description) 0.8793230462903279 37 evm.model.contig_512.12 no hits & (original description: no original description) 0.8790609058034157 38 evm.model.contig_580.2 (at4g31120 : 367.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 734.0) & (original description: no original description) 0.8789017633481345 39 evm.model.contig_442.3 (at5g57950 : 93.2) 26S proteasome regulatory subunit, putative; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) & (original description: no original description) 0.8777698026608558 40 evm.model.contig_4514.3 no hits & (original description: no original description) 0.8745871927694915 75 evm.model.contig_3527.5 (at5g65720 : 568.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 1136.0) & (original description: no original description) 0.8691600407633843 45 evm.model.contig_620.1 no hits & (original description: no original description) 0.8649503417333397 62 evm.model.contig_472.16 (at3g54210 : 159.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (o80363|rk17_tobac : 156.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (reliability: 318.0) & (original description: no original description) 0.8631775520715502 50 evm.model.contig_3438.8 (at5g51120 : 121.0) Encodes a homolog of the protein PABN1, a polyadenylation factor subunit.; polyadenylate-binding protein 1 (PABN1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (reliability: 242.0) & (original description: no original description) 0.8618426499333306 51 evm.model.contig_2032.11 (at5g19470 : 163.0) nudix hydrolase homolog 24 (NUDT24); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: vascular tissue, male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 20 (TAIR:AT5G19460.1). & (reliability: 326.0) & (original description: no original description) 0.8596699572480369 63 evm.model.contig_2396.3 no hits & (original description: no original description) 0.8571656328515727 53 evm.model.contig_2025.65 no hits & (original description: no original description) 0.8567897987052457 54 evm.model.contig_2049.1 (p93768|psmd3_tobac : 340.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g20200 : 327.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 654.0) & (original description: no original description) 0.8511521791458346 56 evm.model.contig_2494.14 no hits & (original description: no original description) 0.8509010032287045 57 evm.model.contig_2169.5 no hits & (original description: no original description) 0.8508648543946324 58 evm.model.contig_3588.2 no hits & (original description: no original description) 0.8485360720540506 73 evm.model.contig_541.4 no hits & (original description: no original description) 0.8459476360387548 60 evm.model.contig_2268.1 no hits & (original description: no original description) 0.8453017796391616 61 evm.model.contig_2059.14 (at5g56760 : 187.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (reliability: 374.0) & (original description: no original description) 0.8349555705653964 68 evm.model.contig_2216.2 no hits & (original description: no original description) 0.823964976981238 76 evm.model.contig_512.7 no hits & (original description: no original description) 0.8233465656071577 93 evm.model.contig_606.5 no hits & (original description: no original description) 0.8203558808188288 81 evm.model.contig_2109.6 no hits & (original description: no original description) 0.8185607896332145 84 evm.model.contig_2318.1 no hits & (original description: no original description) 0.8162934733784416 87 evm.model.contig_2281.12 no hits & (original description: no original description) 0.8158291976929347 88 evm.model.contig_2386.2 no hits & (original description: no original description) 0.8091581353544963 93 evm.model.contig_507.2 no hits & (original description: no original description) 0.8071746771570301 97 evm.model.contig_517.2 no hits & (original description: no original description) 0.8044058875115144 98