Sequence Description Alias PCC hrr evm.model.contig_2025.71 (at4g39080 : 630.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1260.0) & (original description: no original description) 0.8892626305315948 4 evm.model.contig_2131.6 no hits & (original description: no original description) 0.8708318218411387 3 evm.model.contig_3397.4 no hits & (original description: no original description) 0.870626998765609 74 evm.model.contig_467.5 no hits & (original description: no original description) 0.8625504596060285 4 evm.model.contig_444.27 no hits & (original description: no original description) 0.8624532505501327 41 evm.model.contig_3422.8 no hits & (original description: no original description) 0.8442523214170781 15 evm.model.contig_2132.3 (at5g39440 : 200.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (p49101|cdpk2_maize : 187.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 400.0) & (original description: no original description) 0.8371410705864207 16 evm.model.contig_477.15 (at4g04910 : 586.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (p54774|cdc48_soybn : 166.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1172.0) & (original description: no original description) 0.8322524637049683 34 evm.model.contig_2046.6 (at2g45200 : 90.5) Encodes a member of the GOS1 (Golgi SNARE) gene family.; golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1). & (reliability: 181.0) & (original description: no original description) 0.8231224808212286 65 evm.model.contig_2095.2 no hits & (original description: no original description) 0.8229223435862617 12 evm.model.contig_2271.7 (q9sbw3|pp2a4_orysa : 537.0) Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g42500 : 526.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-3 (PP2A-3); FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-4 (TAIR:AT3G58500.1). & (reliability: 1052.0) & (original description: no original description) 0.8220237004762951 13 evm.model.contig_2150.14 no hits & (original description: no original description) 0.8202443901552915 31 evm.model.contig_2353.2 no hits & (original description: no original description) 0.8147258669865709 25 evm.model.contig_4477.10 no hits & (original description: no original description) 0.8116078376556729 16 evm.model.contig_4477.9 (at2g47490 : 112.0) Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 1 (NDT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 28896 Blast hits to 14510 proteins in 466 species: Archae - 0; Bacteria - 6; Metazoa - 12245; Fungi - 8541; Plants - 5076; Viruses - 8; Other Eukaryotes - 3020 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.8099711084739121 19 evm.model.contig_441.4 (at1g55880 : 225.0) Pyridoxal-5'-phosphate-dependent enzyme family protein; FUNCTIONS IN: lyase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, metabolic process, cellular amino acid metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: L-cysteine desulfhydrase 1 (TAIR:AT5G28030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xea6|cysk1_orysa : 185.0) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: no original description) 0.8083566382863777 22 evm.model.contig_3394.3 (at4g12590 : 120.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106, transmembrane (InterPro:IPR002809), Uncharacterised conserved protein UCP010045, transmembrane eukaryotic (InterPro:IPR008568); Has 409 Blast hits to 409 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 136; Plants - 53; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.8039208031341976 27 evm.model.contig_3383.1 no hits & (original description: no original description) 0.7976220744788526 27 evm.model.contig_3431.2 no hits & (original description: no original description) 0.7969569260530511 68 evm.model.contig_3691.1 no hits & (original description: no original description) 0.7961382079589914 29 evm.model.contig_432.4 (at2g20890 : 83.6) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description) 0.7910674371978669 92 evm.model.contig_565.5 no hits & (original description: no original description) 0.7893236136507321 39 evm.model.contig_429.6 no hits & (original description: no original description) 0.7795928444357016 73 evm.model.contig_2066.10 no hits & (original description: no original description) 0.7783622983113243 40 evm.model.contig_509.3 (at1g55900 : 169.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (reliability: 338.0) & (original description: no original description) 0.7752252629740729 43 evm.model.contig_2500.14 (at3g19490 : 498.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 996.0) & (original description: no original description) 0.7733894517086399 59 evm.model.contig_2024.23 no hits & (original description: no original description) 0.7720494041056739 47 evm.model.contig_2347.1 (at5g06120 : 781.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (reliability: 1562.0) & (original description: no original description) 0.7544683908941624 63 evm.model.contig_2095.5 (at4g29530 : 108.0) Pyridoxal phosphate phosphatase-related protein; FUNCTIONS IN: phosphatase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate phosphatase, PHOSPHO2 (InterPro:IPR016965), HAD-superfamily hydrolase, subfamily IB, PSPase-like (InterPro:IPR006383), Pyridoxal phosphate phosphatase-related (InterPro:IPR006384); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate phosphatase-related protein (TAIR:AT1G17710.1); Has 373 Blast hits to 361 proteins in 111 species: Archae - 0; Bacteria - 31; Metazoa - 175; Fungi - 16; Plants - 106; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.7498818239458269 69 evm.model.contig_4543.1 (at3g45640 : 409.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (q40884|mapk_pethy : 405.0) Mitogen-activated protein kinase homolog 1 (EC 2.7.11.24) (PMEK1) - Petunia hybrida (Petunia) & (reliability: 818.0) & (original description: no original description) 0.7320451518674652 85 evm.model.contig_4403.10 "(at4g24450 : 311.0) ""phosphoglucan, water dikinase"" (PWD); FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 1897 Blast hits to 1851 proteins in 785 species: Archae - 196; Bacteria - 1373; Metazoa - 4; Fungi - 3; Plants - 225; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9awa5|gwd1_soltu : 304.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (reliability: 622.0) & (original description: no original description)" 0.7304803625647349 88