Sequence Description Alias PCC hrr evm.model.contig_2707.2 no hits & (original description: no original description) 0.9703784692735516 1 evm.model.contig_623.5 no hits & (original description: no original description) 0.9568460421875487 3 evm.model.contig_542.13 (at1g09280 : 85.9) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9498408838438365 3 evm.model.contig_2157.4 no hits & (original description: no original description) 0.9486206593155214 8 evm.model.contig_4423.3 no hits & (original description: no original description) 0.9480555599475801 5 evm.model.contig_2142.6 no hits & (original description: no original description) 0.9425907721772993 12 evm.model.contig_2494.34 no hits & (original description: no original description) 0.940929134966461 13 evm.model.contig_2239.3 (at5g18640 : 122.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.9397230609574381 8 evm.model.contig_467.6 no hits & (original description: no original description) 0.9385052611493744 48 evm.model.contig_444.23 no hits & (original description: no original description) 0.9379524598474454 10 evm.model.contig_2116.6 no hits & (original description: no original description) 0.9368869939706673 14 evm.model.contig_751.2 no hits & (original description: no original description) 0.9356159864658987 21 evm.model.contig_2120.1 no hits & (original description: no original description) 0.933751496201418 13 evm.model.contig_814.1 (at5g27660 : 177.0) Trypsin family protein with PDZ domain; FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 16463 Blast hits to 16423 proteins in 2614 species: Archae - 115; Bacteria - 10782; Metazoa - 377; Fungi - 151; Plants - 529; Viruses - 0; Other Eukaryotes - 4509 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.9335136977810891 32 evm.model.contig_503.13 (at5g61460 : 315.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 630.0) & (original description: no original description) 0.9329499798875952 21 evm.model.contig_3404.4 (at3g45090 : 176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description) 0.9327654553569807 39 evm.model.contig_2064.7 no hits & (original description: no original description) 0.9315103853144093 17 evm.model.contig_3401.3 no hits & (original description: no original description) 0.9311034410290748 42 evm.model.contig_623.4 no hits & (original description: no original description) 0.9288557833798844 31 evm.model.contig_3419.8 (at2g35920 : 336.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 672.0) & (original description: no original description) 0.9287852948555679 53 evm.model.contig_2096.17 (at2g42160 : 83.2) BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.928180755529247 21 evm.model.contig_455.5 (q9fns4|mbb1_chlre : 103.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (at3g17040 : 87.8) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (reliability: 175.6) & (original description: no original description) 0.9279746829079506 24 evm.model.contig_2068.22 no hits & (original description: no original description) 0.9259518874997631 23 evm.model.contig_542.8 (at5g08415 : 384.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 768.0) & (original description: no original description) 0.9257298154078984 24 evm.model.contig_2284.15 no hits & (original description: no original description) 0.9256574462966317 70 evm.model.contig_3401.12 no hits & (original description: no original description) 0.9241135247175606 48 evm.model.contig_3468.7 no hits & (original description: no original description) 0.9234560334389135 27 evm.model.contig_3550.2 (original description: no original description) 0.9229084911948052 28 evm.model.contig_522.10 (at4g27630 : 139.0) Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.; GPCR-type G protein 2 (GTG2); CONTAINS InterPro DOMAIN/s: GPCR 89-related (InterPro:IPR015672), Protein of unknown function DUF3735 (InterPro:IPR022535); BEST Arabidopsis thaliana protein match is: GPCR-type G protein 1 (TAIR:AT1G64990.2). & (reliability: 278.0) & (original description: no original description) 0.922797944287218 29 evm.model.contig_4446.16 (at4g14350 : 322.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G23310.1); Has 110439 Blast hits to 109096 proteins in 3570 species: Archae - 132; Bacteria - 13667; Metazoa - 39169; Fungi - 11337; Plants - 26451; Viruses - 447; Other Eukaryotes - 19236 (source: NCBI BLink). & (p15792|kpk1_phavu : 151.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|68872 : 118.0) no description available & (reliability: 644.0) & (original description: no original description) 0.9219311132644297 30 evm.model.contig_2298.2 no hits & (original description: no original description) 0.9212020818516136 31 evm.model.contig_2142.2 no hits & (original description: no original description) 0.9206452085389083 32 evm.model.contig_3401.8 no hits & (original description: no original description) 0.9183448407389423 33 evm.model.contig_503.2 (at3g13235 : 204.0) ubiquitin family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase aspartic (InterPro:IPR021109), Ubiquitin subgroup (InterPro:IPR019956), Peptidase aspartic, eukaryotic predicted (InterPro:IPR019103), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Peptidase A2A, retrovirus, catalytic (InterPro:IPR001995), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060). & (reliability: 408.0) & (original description: no original description) 0.9174912801532638 34 evm.model.contig_866.1 no hits & (original description: no original description) 0.9170805756809257 35 evm.model.contig_3405.2 no hits & (original description: no original description) 0.9168586657698532 74 evm.model.contig_510.11 no hits & (original description: no original description) 0.9165538567003821 37 evm.model.contig_2359.6 no hits & (original description: no original description) 0.9158339355940899 38 evm.model.contig_3412.3 no hits & (original description: no original description) 0.9151670295035651 39 evm.model.contig_2017.2 no hits & (original description: no original description) 0.9138852130765275 41 evm.model.contig_786.2 no hits & (original description: no original description) 0.91297439091473 53 evm.model.contig_2017.9 no hits & (original description: no original description) 0.9128896890124895 43 evm.model.contig_2083.7 no hits & (original description: no original description) 0.9092266584480375 45 evm.model.contig_493.4 no hits & (original description: no original description) 0.9089158932044387 46 evm.model.contig_4465.6 no hits & (original description: no original description) 0.9085412586260242 47 evm.model.contig_444.31 (original description: no original description) 0.9084171947692297 96 evm.model.contig_2262.6 no hits & (original description: no original description) 0.9082575633860258 59 evm.model.contig_2349.11 no hits & (original description: no original description) 0.9079661232654307 51 evm.model.contig_4438.20 (at3g44680 : 541.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (p56521|hdac_maize : 513.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1082.0) & (original description: no original description) 0.9066121080094689 60 evm.model.contig_2064.3 no hits & (original description: no original description) 0.906324580472473 55 evm.model.contig_2112.5 no hits & (original description: no original description) 0.9053612117552496 56 evm.model.contig_2016.8 (at1g16440 : 228.0) root hair specific 3 (RSH3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC kinase 1.7 (TAIR:AT1G79250.2); Has 101577 Blast hits to 89577 proteins in 2716 species: Archae - 38; Bacteria - 12727; Metazoa - 39279; Fungi - 11275; Plants - 19035; Viruses - 382; Other Eukaryotes - 18841 (source: NCBI BLink). & (p15792|kpk1_phavu : 201.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 456.0) & (original description: no original description) 0.9053349243531116 57 evm.model.contig_2246.4 no hits & (original description: no original description) 0.9052974433834317 58 evm.model.contig_4424.5 no hits & (original description: no original description) 0.9047553018200606 59 evm.model.contig_2079.7 no hits & (original description: no original description) 0.904507023389742 60 evm.model.contig_2194.7 no hits & (original description: no original description) 0.904286970235198 61 evm.model.contig_2020.12 no hits & (original description: no original description) 0.9035224074748944 62 evm.model.contig_2092.5 no hits & (original description: no original description) 0.9034605685909936 63 evm.model.contig_2286.2 no hits & (original description: no original description) 0.9025567198969556 65 evm.model.contig_527.2 no hits & (original description: no original description) 0.9022714441874696 84 evm.model.contig_3545.2 (at4g36650 : 89.7) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.8989555725864421 72 evm.model.contig_2291.6 no hits & (original description: no original description) 0.8984038791241998 73 evm.model.contig_482.14 no hits & (original description: no original description) 0.8981816384977817 75 evm.model.contig_693.2 no hits & (original description: no original description) 0.8961401243557222 77 evm.model.contig_480.1 (original description: no original description) 0.8958688260932987 78 evm.model.contig_2177.8 (at1g21760 : 88.6) This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures.; F-box protein 7 (FBP7); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 471 Blast hits to 471 proteins in 160 species: Archae - 0; Bacteria - 0; Metazoa - 249; Fungi - 132; Plants - 70; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description) 0.8916898428584354 85 evm.model.contig_2282.18 no hits & (original description: no original description) 0.8914624583044327 86 evm.model.contig_2445.5 no hits & (original description: no original description) 0.8913119401079399 87 evm.model.contig_3585.1 no hits & (original description: no original description) 0.8910940275099746 88 evm.model.contig_2504.3 no hits & (original description: no original description) 0.890328986609308 92 evm.model.contig_4492.1 (at4g08550 : 107.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description) 0.8894096052258906 90 evm.model.contig_4418.18 (gnl|cdd|68872 : 118.0) no description available & (at3g51620 : 86.7) PAP/OAS1 substrate-binding domain superfamily; BEST Arabidopsis thaliana protein match is: nucleotidyltransferases (TAIR:AT3G61690.1); Has 386 Blast hits to 356 proteins in 104 species: Archae - 0; Bacteria - 4; Metazoa - 102; Fungi - 40; Plants - 181; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description) 0.8878013417755575 93 evm.model.contig_4461.3 no hits & (original description: no original description) 0.8877747927771851 94 evm.model.contig_3521.4 no hits & (original description: no original description) 0.8871902954816518 96 evm.model.contig_3442.5 no hits & (original description: no original description) 0.8857358692327034 99