Sequence Description Alias PCC hrr evm.model.contig_567.3 no hits & (original description: no original description) 0.9781751600348888 1 evm.model.contig_3552.1 (at1g02170 : 189.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (gnl|cdd|34653 : 128.0) no description available & (reliability: 378.0) & (original description: no original description) 0.9681831502999546 2 evm.model.contig_2324.3 no hits & (original description: no original description) 0.9624499341467718 3 evm.model.contig_4418.8 no hits & (original description: no original description) 0.9581984203858099 4 evm.model.contig_4572.1 (at2g32400 : 97.8) Glr5; glutamate receptor 5 (GLR5); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2); Has 6965 Blast hits to 6802 proteins in 627 species: Archae - 64; Bacteria - 977; Metazoa - 4763; Fungi - 0; Plants - 634; Viruses - 0; Other Eukaryotes - 527 (source: NCBI BLink). & (q7xp59|glr31_orysa : 81.6) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 195.6) & (original description: no original description) 0.9554243259278834 11 evm.model.contig_554.7 (at3g12150 : 159.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description) 0.9526105294377197 6 evm.model.contig_105.1 (at2g22730 : 98.2) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G65687.1); Has 17716 Blast hits to 17664 proteins in 2057 species: Archae - 323; Bacteria - 13331; Metazoa - 891; Fungi - 1841; Plants - 194; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.9478933823505166 7 evm.model.contig_2059.22 no hits & (original description: no original description) 0.9452780251839161 14 evm.model.contig_3438.4 no hits & (original description: no original description) 0.9348891981443711 9 evm.model.contig_2446.2 no hits & (original description: no original description) 0.9347546691377779 10 evm.model.contig_2070.1 no hits & (original description: no original description) 0.9346232908999625 22 evm.model.contig_2347.6 no hits & (original description: no original description) 0.9345071657548101 52 evm.model.contig_2345.8 no hits & (original description: no original description) 0.9303030732595662 13 evm.model.contig_4433.3 no hits & (original description: no original description) 0.9297150150521668 39 evm.model.contig_2019.19 no hits & (original description: no original description) 0.9267200082282472 51 evm.model.contig_2068.14 (at2g36740 : 92.8) SWC2; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272), YL1 nuclear (InterPro:IPR008895); Has 4932 Blast hits to 3253 proteins in 360 species: Archae - 2; Bacteria - 230; Metazoa - 1594; Fungi - 576; Plants - 159; Viruses - 97; Other Eukaryotes - 2274 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.926617858397016 26 evm.model.contig_639.3 (original description: no original description) 0.9262658268689841 20 evm.model.contig_3588.2 no hits & (original description: no original description) 0.925574553936252 18 evm.model.contig_2358.2 (at3g62600 : 100.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.9253990591036717 21 evm.model.contig_526.6 no hits & (original description: no original description) 0.9224884670496369 20 evm.model.contig_2301.5 no hits & (original description: no original description) 0.9223229139615042 27 evm.model.contig_2301.6 no hits & (original description: no original description) 0.9217301561770034 22 evm.model.contig_3504.1 (at1g14570 : 108.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.9184752611126086 29 evm.model.contig_2070.20 no hits & (original description: no original description) 0.9173435443625482 24 evm.model.contig_4514.3 no hits & (original description: no original description) 0.915822882040705 25 evm.model.contig_2284.2 no hits & (original description: no original description) 0.9154951049082416 26 evm.model.contig_2491.1 no hits & (original description: no original description) 0.9153350288631866 32 evm.model.contig_3557.3 no hits & (original description: no original description) 0.9150918944021376 46 evm.model.contig_4448.4 no hits & (original description: no original description) 0.9140727437511691 31 evm.model.contig_3552.4 no hits & (original description: no original description) 0.9133531261245014 82 evm.model.contig_4461.10 no hits & (original description: no original description) 0.9130425590584842 31 evm.model.contig_2199.5 (at5g17230 : 298.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (p37272|psy_capan : 297.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (reliability: 596.0) & (original description: no original description) 0.9122931191113571 80 evm.model.contig_4577.1 no hits & (original description: no original description) 0.9102147765572862 48 evm.model.contig_3508.5 (at1g80600 : 92.8) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.9099788683273188 57 evm.model.contig_2102.1 no hits & (original description: no original description) 0.9099659987797403 36 evm.model.contig_2494.6 (original description: no original description) 0.9093685601661073 37 evm.model.contig_737.1 (original description: no original description) 0.9087769058804874 67 evm.model.contig_3396.6 (at5g08415 : 349.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description) 0.9057940618941388 39 evm.model.contig_532.1 (at2g27580 : 94.4) A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1). & (q9llx1|isap1_orysa : 82.0) Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) & (reliability: 171.8) & (original description: no original description) 0.9055390936136947 56 evm.model.contig_747.3 no hits & (original description: no original description) 0.9046595065265559 41 evm.model.contig_3385.19 no hits & (original description: no original description) 0.9030375312788887 51 evm.model.contig_2044.20 no hits & (original description: no original description) 0.9027512852097531 91 evm.model.contig_2032.29 (at1g78620 : 146.0) Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description) 0.9019882815102078 45 evm.model.contig_3415.7 no hits & (original description: no original description) 0.8984972603438872 90 evm.model.contig_537.2 no hits & (original description: no original description) 0.8979303654670187 57 evm.model.contig_804.1 no hits & (original description: no original description) 0.8966105667281066 49 evm.model.contig_2283.5 no hits & (original description: no original description) 0.8962871571380242 90 evm.model.contig_4465.10 no hits & (original description: no original description) 0.8955296235383629 53 evm.model.contig_2065.2 (at5g12190 : 82.8) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G14870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.893251899353412 55 evm.model.contig_720.2 no hits & (original description: no original description) 0.8909870393746885 65 evm.model.contig_3435.2 (at5g10980 : 245.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 243.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 490.0) & (original description: no original description) 0.8902110211805906 78 evm.model.contig_4611.1 no hits & (original description: no original description) 0.8895496353577647 62 evm.model.contig_2284.12 no hits & (original description: no original description) 0.8866968902125517 67 evm.model.contig_465.7 (at5g52580 : 139.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (reliability: 278.0) & (original description: no original description) 0.8835632206396983 79 evm.model.contig_4402.6 no hits & (original description: no original description) 0.8832994155917367 90 evm.model.contig_2024.13 no hits & (original description: no original description) 0.8807166898275061 70 evm.model.contig_3420.8 no hits & (original description: no original description) 0.8800411214836624 72 evm.model.contig_450.4 no hits & (original description: no original description) 0.8795031659245134 74 evm.model.contig_3501.1 no hits & (original description: no original description) 0.8778717603350884 77 evm.model.contig_4435.8 (at5g15450 : 745.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 709.0) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 1490.0) & (original description: no original description) 0.8747862576090246 92 evm.model.contig_4405.5 no hits & (original description: no original description) 0.8730861455602236 80 evm.model.contig_2132.11 no hits & (original description: no original description) 0.8696487679916503 84 evm.model.contig_16.2 no hits & (original description: no original description) 0.8685659634603875 87 evm.model.contig_884.1 no hits & (original description: no original description) 0.8684889679179535 88 evm.model.contig_2246.3 no hits & (original description: no original description) 0.8681332161625427 89 evm.model.contig_606.9 no hits & (original description: no original description) 0.8680473647518471 90 evm.model.contig_4449.3 no hits & (original description: no original description) 0.8665520524133269 97 evm.model.contig_3410.1 no hits & (original description: no original description) 0.8660198112673537 98 evm.model.contig_175.1 no hits & (original description: no original description) 0.864676962340691 99