Sequence Description Alias PCC hrr evm.model.contig_4446.11 (at1g51310 : 350.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (reliability: 700.0) & (original description: no original description) 0.8990962573612455 4 evm.model.contig_437.3 (at4g06599 : 227.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 454.0) & (original description: no original description) 0.8942138972052378 3 evm.model.contig_3525.4 (at1g67960 : 106.0) CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description) 0.8575236293879228 64 evm.model.contig_3509.5 (at5g52790 : 181.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.8459247019676952 39 evm.model.contig_537.4 (at5g16630 : 123.0) RAD4; FUNCTIONS IN: damaged DNA binding; INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, DNA-binding domain 1 (InterPro:IPR018326), DNA repair protein Rad4, DNA-binding domain 3 (InterPro:IPR018328), DNA repair protein Rad4, DNA-binding domain 2 (InterPro:IPR018327), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), DNA repair protein Rad4 (InterPro:IPR004583); Has 662 Blast hits to 576 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 265; Plants - 79; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description) 0.8368411859251892 38 evm.model.contig_3659.1 no hits & (original description: no original description) 0.8365612641276796 46 evm.model.contig_2013.1 (at5g08110 : 250.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description) 0.8330948455161712 69 evm.model.contig_3623.1 (at1g70630 : 80.1) Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.8308331322017781 99 evm.model.contig_3384.2 no hits & (original description: no original description) 0.827248774814785 14 evm.model.contig_2149.1 no hits & (original description: no original description) 0.8245928854274293 47 evm.model.contig_2281.13 no hits & (original description: no original description) 0.8218978999689412 20 evm.model.contig_3579.1 (at1g10520 : 132.0) DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description) 0.8156075837573333 37 evm.model.contig_2149.13 (original description: no original description) 0.7939866261131694 60 evm.model.contig_3416.7 (q2r1u4|ck5p1_orysa : 434.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (at4g36390 : 410.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (reliability: 820.0) & (original description: no original description) 0.7860241727049054 82 evm.model.contig_2149.3 (original description: no original description) 0.7843973064258424 83 evm.model.contig_2147.2 no hits & (original description: no original description) 0.7784921620900473 100