Sequence Description Alias PCC hrr evm.model.contig_2293.7 (at3g49080 : 95.1) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.9498603928387974 20 evm.model.contig_3690.5 (at2g39770 : 439.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (reliability: 878.0) & (original description: no original description) 0.9472385435262385 35 evm.model.contig_566.8 (at1g27970 : 130.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 122.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: no original description) 0.9393659672451723 9 evm.model.contig_433.10 (at4g31600 : 168.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.9383894335546664 88 evm.model.contig_4462.10 no hits & (original description: no original description) 0.93614471107282 7 evm.model.contig_4403.4 no hits & (original description: no original description) 0.9346972964699058 6 evm.model.contig_2255.6 (at3g18190 : 609.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (p40412|tcpe1_avesa : 275.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1218.0) & (original description: no original description) 0.9337266794817105 86 evm.model.contig_4404.20 no hits & (original description: no original description) 0.9331898253556694 64 evm.model.contig_3426.16 (at1g54140 : 99.4) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description) 0.9326116761692489 44 evm.model.contig_3661.1 no hits & (original description: no original description) 0.9321677550310209 10 evm.model.contig_3698.1 (at4g33110 : 385.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (reliability: 770.0) & (original description: no original description) 0.9315061860401868 17 evm.model.contig_850.1 (original description: no original description) 0.9311131449025568 19 evm.model.contig_2057.11 (at3g22950 : 186.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.; ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1). & (p51824|arf1_soltu : 175.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 372.0) & (original description: no original description) 0.9303817161096465 30 evm.model.contig_713.1 (original description: no original description) 0.9299836857998667 30 evm.model.contig_2029.1 (at5g49510 : 92.8) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.9297443737376031 92 evm.model.contig_2154.12 (q9slx0|ima1b_orysa : 536.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (at3g06720 : 529.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 1058.0) & (original description: no original description) 0.9295662507463779 48 evm.model.contig_3399.11 (at1g65650 : 249.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description) 0.9295410977406785 32 evm.model.contig_435.10 (at3g07750 : 85.9) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.9279143528762224 45 evm.model.contig_491.2 (at1g67730 : 152.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.9257561306359255 21 evm.model.contig_3428.1 (at5g61970 : 213.0) signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.923806036733556 31 evm.model.contig_2121.24 (at1g34130 : 261.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description) 0.9226238452759666 99 evm.model.contig_4476.7 no hits & (original description: no original description) 0.9216715444437741 28 evm.model.contig_516.11 (o49071|impp_mescr : 159.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (at3g02870 : 154.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description) 0.9211572546973674 29 evm.model.contig_4516.3 (at5g43940 : 440.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 438.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (reliability: 880.0) & (original description: no original description) 0.9183163260850714 41 evm.model.contig_456.2 no hits & (original description: no original description) 0.9170775573028623 58 evm.model.contig_3402.6 (original description: no original description) 0.9165062744060121 37 evm.model.contig_3527.3 no hits & (original description: no original description) 0.9150626568224167 38 evm.model.contig_4404.21 (at1g13120 : 102.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.9132248087772188 41 evm.model.contig_4438.4 (at4g22310 : 115.0) Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G14695.1); Has 886 Blast hits to 886 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 387; Fungi - 234; Plants - 170; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.9118449137371728 76 evm.model.contig_2149.8 no hits & (original description: no original description) 0.9095443227169007 53 evm.model.contig_4467.3 no hits & (original description: no original description) 0.9007174108608759 100 evm.model.contig_2059.34 (at2g20060 : 100.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.899572806129647 77 evm.model.contig_439.3 no hits & (original description: no original description) 0.8995292848645194 78 evm.model.contig_3487.5 no hits & (original description: no original description) 0.8992992870448474 79 evm.model.contig_2070.26 no hits & (original description: no original description) 0.8991703994277613 81 evm.model.contig_4495.4 no hits & (original description: no original description) 0.8986004536223355 86 evm.model.contig_3524.3 no hits & (original description: no original description) 0.8971641049884383 89 evm.model.contig_449.6 no hits & (original description: no original description) 0.8970197228720224 90 evm.model.contig_452.10 (at5g17670 : 172.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.8959056485106773 93