Sequence Description Alias PCC hrr evm.model.contig_456.2 no hits & (original description: no original description) 0.943293403678752 11 evm.model.contig_3521.3 no hits & (original description: no original description) 0.9386781929896488 25 evm.model.contig_713.1 (original description: no original description) 0.9345511260877707 24 evm.model.contig_3806.1 (at5g35410 : 216.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 204.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 432.0) & (original description: no original description) 0.9321910469088716 4 evm.model.contig_4604.2 no hits & (original description: no original description) 0.9272835245566139 59 evm.model.contig_4511.2 no hits & (original description: no original description) 0.9269899309663469 100 evm.model.contig_2291.5 (at1g76050 : 165.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.9240684068369486 14 evm.model.contig_2024.21 no hits & (original description: no original description) 0.9237124626396485 33 evm.model.contig_2136.5 (at2g01720 : 90.1) Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT1G76400.1); Has 386 Blast hits to 386 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (gnl|cdd|68872 : 88.9) no description available & (reliability: 180.2) & (original description: no original description) 0.9215300895589329 37 evm.model.contig_4476.7 no hits & (original description: no original description) 0.9167333310440207 29 evm.model.contig_515.3 (at2g03120 : 178.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description) 0.9102204064219751 13 evm.model.contig_473.1 no hits & (original description: no original description) 0.907886933224222 40 evm.model.contig_2422.1 no hits & (original description: no original description) 0.9049402984464342 50 evm.model.contig_3422.9 no hits & (original description: no original description) 0.9036015333238719 20 evm.model.contig_4430.1 (at2g01320 : 505.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 209.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1010.0) & (original description: no original description) 0.9032608045659601 27 evm.model.contig_4404.28 no hits & (original description: no original description) 0.902924878018468 61 evm.model.contig_4460.3 no hits & (original description: no original description) 0.9021131491416653 20 evm.model.contig_491.2 (at1g67730 : 152.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description) 0.89990960398538 49 evm.model.contig_776.2 no hits & (original description: no original description) 0.8998626178742519 83 evm.model.contig_4429.3 (at5g40280 : 192.0) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.; ENHANCED RESPONSE TO ABA 1 (ERA1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 2257 Blast hits to 1610 proteins in 263 species: Archae - 4; Bacteria - 30; Metazoa - 707; Fungi - 630; Plants - 303; Viruses - 4; Other Eukaryotes - 579 (source: NCBI BLink). & (q04903|pftb_pea : 176.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 384.0) & (original description: no original description) 0.8972757537648417 32 evm.model.contig_457.3 (at3g45040 : 107.0) Encodes a putative dolichol kinase.; phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description) 0.8957976618607414 25 evm.model.contig_2082.4 (at1g18340 : 110.0) basal transcription factor complex subunit-related; FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: core TFIIH complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb4 (InterPro:IPR004600); Has 359 Blast hits to 354 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 143; Plants - 47; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8918726568079737 29 evm.model.contig_2621.3 no hits & (original description: no original description) 0.8912564669000097 32 evm.model.contig_4403.4 no hits & (original description: no original description) 0.8911143544568947 58 evm.model.contig_527.22 (original description: no original description) 0.8908443155704681 81 evm.model.contig_4429.12 no hits & (original description: no original description) 0.89042797695282 35 evm.model.contig_472.9 no hits & (original description: no original description) 0.8903862541007721 46 evm.model.contig_2135.2 (at1g03190 : 793.0) UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.; ULTRAVIOLET HYPERSENSITIVE 6 (UVH6); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, response to UV, response to heat; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Xeroderma pigmentosum group D protein (InterPro:IPR001945), Helicase-like, DEXD box c2 type (InterPro:IPR006554), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD2 (InterPro:IPR010614), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Protein of unknown function DUF1227 (InterPro:IPR010643); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3290 Blast hits to 2576 proteins in 779 species: Archae - 308; Bacteria - 1186; Metazoa - 653; Fungi - 359; Plants - 198; Viruses - 2; Other Eukaryotes - 584 (source: NCBI BLink). & (reliability: 1586.0) & (original description: no original description) 0.8897236669379542 99 evm.model.contig_493.20 (at5g52030 : 139.0) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT1G05270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.8842598062307604 46 evm.model.contig_2509.1 no hits & (original description: no original description) 0.8836792399051587 47 evm.model.contig_4402.4 (at5g33320 : 98.2) Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.; CAB UNDEREXPRESSED 1 (CUE1); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: mitochondrion, chloroplast, plastid, plastid inner membrane, chloroplast envelope; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate (pep)/phosphate translocator 2 (TAIR:AT3G01550.1); Has 2791 Blast hits to 2789 proteins in 409 species: Archae - 9; Bacteria - 295; Metazoa - 571; Fungi - 421; Plants - 1194; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.883154121716593 51 evm.model.contig_4403.5 no hits & (original description: no original description) 0.8826609988488489 50 evm.model.contig_4404.21 (at1g13120 : 102.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8822607298602724 88 evm.model.contig_2044.34 (at3g10540 : 123.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (p53681|crk_dauca : 103.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 246.0) & (original description: no original description) 0.8809907235951642 94 evm.model.contig_3707.3 no hits & (original description: no original description) 0.8805000831130828 79 evm.model.contig_2015.27 no hits & (original description: no original description) 0.8791545292397356 60 evm.model.contig_3515.9 no hits & (original description: no original description) 0.8774108303305034 97 evm.model.contig_3649.1 no hits & (original description: no original description) 0.876637888165176 69 evm.model.contig_2064.6 (at3g49660 : 100.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93107|pf20_chlre : 85.9) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 188.0) & (original description: no original description) 0.8763762595488815 72 evm.model.contig_2508.3 no hits & (original description: no original description) 0.8761718494376377 74 evm.model.contig_2064.9 no hits & (original description: no original description) 0.8745582086620233 78 evm.model.contig_3512.4 (at3g61080 : 213.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructosamine/Ketosamine-3-kinase (InterPro:IPR016477), Protein kinase-like domain (InterPro:IPR011009); Has 2101 Blast hits to 2101 proteins in 833 species: Archae - 8; Bacteria - 1432; Metazoa - 140; Fungi - 164; Plants - 42; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.8724797701138353 86 evm.model.contig_3405.11 (at5g28740 : 351.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 702.0) & (original description: no original description) 0.8720739977965926 89 evm.model.contig_2198.8 no hits & (original description: no original description) 0.871463870255249 90 evm.model.contig_434.3 (at4g24490 : 113.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.8705793871367671 92 evm.model.contig_2228.1 no hits & (original description: no original description) 0.8694967141769546 96 evm.model.contig_3488.2 no hits & (original description: no original description) 0.8691743687325129 97