Sequence Description Alias PCC hrr evm.model.contig_2191.2 (at5g27540 : 371.0) Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.; MIRO-related GTP-ase 1 (MIRO1); FUNCTIONS IN: GTP binding; INVOLVED IN: pollen tube growth, mitochondrion organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Mitochondrial Rho GTPase (InterPro:IPR021181), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 2 (TAIR:AT3G63150.1); Has 8016 Blast hits to 7980 proteins in 467 species: Archae - 6; Bacteria - 176; Metazoa - 4167; Fungi - 1485; Plants - 887; Viruses - 0; Other Eukaryotes - 1295 (source: NCBI BLink). & (reliability: 742.0) & (original description: no original description) 0.9619441011358414 1 evm.model.contig_4549.1 no hits & (original description: no original description) 0.9308177033636795 13 evm.model.contig_2043.4 no hits & (original description: no original description) 0.9288470783140955 4 evm.model.contig_4400.6 no hits & (original description: no original description) 0.9282757242718441 7 evm.model.contig_2136.6 no hits & (original description: no original description) 0.9260647403891021 15 evm.model.contig_2055.8 no hits & (original description: no original description) 0.9230152484686153 12 evm.model.contig_510.9 no hits & (original description: no original description) 0.9225576443499148 7 evm.model.contig_2189.5 no hits & (original description: no original description) 0.915509958118812 16 evm.model.contig_3502.1 no hits & (original description: no original description) 0.9139053708249407 16 evm.model.contig_2070.30 no hits & (original description: no original description) 0.9122043305090127 10 evm.model.contig_2316.6 (at5g39440 : 186.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 169.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 372.0) & (original description: no original description) 0.9116110419636968 11 evm.model.contig_2284.11 (at4g38495 : 87.0) CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description) 0.9031086520902128 12 evm.model.contig_4402.2 no hits & (original description: no original description) 0.9018738802335967 18 evm.model.contig_2012.4 (at4g16800 : 137.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (o49809|mfpa_brana : 116.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 274.0) & (original description: no original description) 0.8967952353345617 26 evm.model.contig_631.1 no hits & (original description: no original description) 0.8955789059880956 20 evm.model.contig_2291.1 no hits & (original description: no original description) 0.8879451459500971 30 evm.model.contig_774.2 (p28011|aat1_medsa : 417.0) Aspartate aminotransferase 1 (EC 2.6.1.1) (Transaminase A) - Medicago sativa (Alfalfa) & (at5g19550 : 408.0) Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.; aspartate aminotransferase 2 (ASP2); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 816.0) & (original description: no original description) 0.8872708376780942 17 evm.model.contig_613.5 no hits & (original description: no original description) 0.886981414034999 31 evm.model.contig_3765.1 no hits & (original description: no original description) 0.8833572219825909 19 evm.model.contig_3654.2 no hits & (original description: no original description) 0.882728599953674 20 evm.model.contig_496.19 no hits & (original description: no original description) 0.8820638883807841 21 evm.model.contig_2059.6 (at5g10980 : 218.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 216.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 436.0) & (original description: no original description) 0.8799955216145694 22 evm.model.contig_2041.1 no hits & (original description: no original description) 0.8796790501029996 51 evm.model.contig_438.1 no hits & (original description: no original description) 0.8794765958532599 32 evm.model.contig_526.5 (at5g60550 : 100.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 95.5) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 198.0) & (original description: no original description) 0.8793631374196462 25 evm.model.contig_2084.8 (at5g11980 : 201.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.8787481107056754 43 evm.model.contig_3436.4 (at2g30050 : 299.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: membrane budding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G01340.2); Has 24526 Blast hits to 15097 proteins in 577 species: Archae - 22; Bacteria - 4838; Metazoa - 8772; Fungi - 5346; Plants - 2605; Viruses - 0; Other Eukaryotes - 2943 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description) 0.8751816345621343 27 evm.model.contig_525.7 no hits & (original description: no original description) 0.8751731300087711 63 evm.model.contig_3766.1 no hits & (original description: no original description) 0.8729170598091136 36 evm.model.contig_2187.5 (at5g26110 : 149.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Kinase-associated endopeptidase 1, Bud32 (InterPro:IPR022495), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.8720152871825917 33 evm.model.contig_4439.1 no hits & (original description: no original description) 0.8718543778436733 45 evm.model.contig_441.9 no hits & (original description: no original description) 0.8716321445306121 61 evm.model.contig_712.2 no hits & (original description: no original description) 0.8696639491619382 34 evm.model.contig_2067.2 no hits & (original description: no original description) 0.8691615196242564 55 evm.model.contig_2100.5 no hits & (original description: no original description) 0.8685347186228533 35 evm.model.contig_3527.5 (at5g65720 : 568.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 1136.0) & (original description: no original description) 0.8652542505894059 51 evm.model.contig_2086.6 no hits & (original description: no original description) 0.8639507854349435 37 evm.model.contig_612.2 (at5g61540 : 138.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.8630775840262437 38 evm.model.contig_3537.1 (at2g45130 : 95.1) SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.8615308811663153 39 evm.model.contig_2094.5 no hits & (original description: no original description) 0.8601552848605463 40 evm.model.contig_2012.1 (at5g66120 : 352.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.8599902826341237 41 evm.model.contig_4581.1 no hits & (original description: no original description) 0.8532813586766214 68 evm.model.contig_4427.2 no hits & (original description: no original description) 0.85273774564125 43 evm.model.contig_4516.2 no hits & (original description: no original description) 0.8496974814874309 52 evm.model.contig_4416.16 (at1g26830 : 317.0) Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.; cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description) 0.8495366676282087 52 evm.model.contig_2032.11 (at5g19470 : 163.0) nudix hydrolase homolog 24 (NUDT24); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: vascular tissue, male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 20 (TAIR:AT5G19460.1). & (reliability: 326.0) & (original description: no original description) 0.8495211901881741 70 evm.model.contig_763.1 no hits & (original description: no original description) 0.8472011845599953 78 evm.model.contig_3542.7 no hits & (original description: no original description) 0.8458469344402548 48 evm.model.contig_2034.6 (at2g06530 : 125.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.8447762298000178 49 evm.model.contig_465.4 no hits & (original description: no original description) 0.8433685076148106 69 evm.model.contig_774.1 (at5g39440 : 163.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 145.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description) 0.8427380866409109 51 evm.model.contig_2027.3 no hits & (original description: no original description) 0.8418631484887195 52 evm.model.contig_4408.8 (at1g74150 : 95.1) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 11763 Blast hits to 5823 proteins in 445 species: Archae - 10; Bacteria - 555; Metazoa - 4461; Fungi - 1268; Plants - 2654; Viruses - 19; Other Eukaryotes - 2796 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.8415607911290414 53 evm.model.contig_2210.3 no hits & (original description: no original description) 0.8397615800786787 65 evm.model.contig_3672.1 no hits & (original description: no original description) 0.8338836596172512 79 evm.model.contig_3410.10 (at2g04540 : 302.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p23902|kasc1_horvu : 220.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 604.0) & (original description: no original description) 0.8337298428003728 71 evm.model.contig_580.2 (at4g31120 : 367.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 734.0) & (original description: no original description) 0.8328035495701738 100 evm.model.contig_2681.3 no hits & (original description: no original description) 0.8325832994305913 59 evm.model.contig_493.26 no hits & (original description: no original description) 0.832343368487074 72 evm.model.contig_829.1 no hits & (original description: no original description) 0.8318898772896467 75 evm.model.contig_2377.1 no hits & (original description: no original description) 0.8310974056222183 62 evm.model.contig_2069.9 no hits & (original description: no original description) 0.8304097499895791 63 evm.model.contig_2130.5 no hits & (original description: no original description) 0.8286070936967339 97 evm.model.contig_2092.11 (p05435|atpg_spiol : 83.2) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Spinacia oleracea (Spinach) & (at4g04640 : 82.4) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8278007624749276 65 evm.model.contig_2612.2 no hits & (original description: no original description) 0.826382260732595 67 evm.model.contig_461.4 no hits & (original description: no original description) 0.8258092720925331 78 evm.model.contig_3702.2 (at1g18360 : 86.7) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 6456 Blast hits to 6448 proteins in 1759 species: Archae - 38; Bacteria - 4736; Metazoa - 147; Fungi - 149; Plants - 444; Viruses - 63; Other Eukaryotes - 879 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description) 0.8247639674280064 77 evm.model.contig_2011.2 no hits & (original description: no original description) 0.8246915272323824 70 evm.model.contig_653.7 no hits & (original description: no original description) 0.8218867362095822 72 evm.model.contig_452.4 no hits & (original description: no original description) 0.8207096468756411 81 evm.model.contig_4462.9 no hits & (original description: no original description) 0.8188762629687094 74 evm.model.contig_3392.10 (at1g79440 : 417.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (o24174|badh_orysa : 249.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 834.0) & (original description: no original description) 0.8184355147541958 75 evm.model.contig_537.10 no hits & (original description: no original description) 0.8158685826257868 77 evm.model.contig_2468.8 no hits & (original description: no original description) 0.8156151722960411 78 evm.model.contig_541.4 no hits & (original description: no original description) 0.8140924645531942 80 evm.model.contig_606.5 no hits & (original description: no original description) 0.8136540400844614 81 evm.model.contig_2454.1 no hits & (original description: no original description) 0.8121477267492281 83 evm.model.contig_2198.1 no hits & (original description: no original description) 0.8063506170762557 87 evm.model.contig_2135.1 no hits & (original description: no original description) 0.8059462564775961 89 evm.model.contig_4495.5 no hits & (original description: no original description) 0.8059455954575898 90 evm.model.contig_523.4 (at1g36070 : 92.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G78070.1). & (reliability: 184.0) & (original description: no original description) 0.8058154601345558 91 evm.model.contig_3438.1 no hits & (original description: no original description) 0.8045945242799771 92 evm.model.contig_4457.4 (at5g61780 : 247.0) Involved in the regulation of AtGA20ox3 expression, as well as seed germination.; TUDOR-SN protein 2 (Tudor2); FUNCTIONS IN: RNA binding, nuclease activity, nucleic acid binding; INVOLVED IN: response to cadmium ion, protein secretion, gibberellin biosynthetic process, seed germination, response to stress; LOCATED IN: cytosol, nuclear envelope, endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 1 (TAIR:AT5G07350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description) 0.802925417712665 94 evm.model.contig_3423.39 (at4g29060 : 100.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.8002407982116937 97 evm.model.contig_2273.20 no hits & (original description: no original description) 0.799913276389371 98 evm.model.contig_2099.4 no hits & (original description: no original description) 0.7992360500942826 99 evm.model.contig_711.1 (at5g42790 : 286.0) encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.; proteasome alpha subunit F1 (PAF1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to arsenic, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit F2 (TAIR:AT1G47250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52428|psa1_orysa : 283.0) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: no original description) 0.7991439920303364 100