Sequence Description Alias PCC hrr evm.model.contig_3421.4 (at2g26930 : 233.0) Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.; 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK); FUNCTIONS IN: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (InterPro:IPR004424), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 6617 Blast hits to 6617 proteins in 2226 species: Archae - 3; Bacteria - 4583; Metazoa - 0; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 1960 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description) 0.9274424043351772 1 evm.model.contig_446.7 (at1g34130 : 659.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1318.0) & (original description: no original description) 0.9059996268914364 46 evm.model.contig_2036.6 no hits & (original description: no original description) 0.9024659884701556 3 evm.model.contig_4543.2 (at5g57300 : 104.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (reliability: 208.0) & (original description: no original description) 0.9021748395875445 13 evm.model.contig_2043.1 (at5g14460 : 104.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.9006956805800603 62 evm.model.contig_3396.15 no hits & (original description: no original description) 0.8994746207657308 6 evm.model.contig_4443.3 (at1g19120 : 102.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G14080.2); Has 1149 Blast hits to 1149 proteins in 232 species: Archae - 65; Bacteria - 0; Metazoa - 426; Fungi - 329; Plants - 203; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8993239342204625 10 evm.model.contig_3464.2 (at4g17300 : 185.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description) 0.8947415413941076 71 evm.model.contig_2079.2 (at1g21370 : 243.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description) 0.8923651519130658 58 evm.model.contig_2282.13 no hits & (original description: no original description) 0.8921790174546927 12 evm.model.contig_2717.2 no hits & (original description: no original description) 0.8899233743695582 11 evm.model.contig_482.11 (at5g66680 : 223.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.8884825571385055 78 evm.model.contig_2094.13 (at1g30910 : 156.0) Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q655r6|mocos_orysa : 105.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 312.0) & (original description: no original description) 0.8878650489117257 31 evm.model.contig_603.5 no hits & (original description: no original description) 0.8871912512982884 61 evm.model.contig_2121.27 (at5g23880 : 382.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 280.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: no original description) 0.8861548561400716 37 evm.model.contig_4442.6 no hits & (original description: no original description) 0.8857381912901179 17 evm.model.contig_3385.8 no hits & (original description: no original description) 0.8839707475638067 50 evm.model.contig_2083.16 (at3g59650 : 90.9) mitochondrial ribosomal protein L51/S25/CI-B8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741). & (reliability: 181.8) & (original description: no original description) 0.8837741867811472 35 evm.model.contig_2663.8 no hits & (original description: no original description) 0.8831499429337433 29 evm.model.contig_667.4 (at2g21250 : 236.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 205.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 472.0) & (original description: no original description) 0.8812006289222714 59 evm.model.contig_2020.29 (at3g07300 : 196.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8806450562339248 36 evm.model.contig_4438.23 (at3g58750 : 318.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 314.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 636.0) & (original description: no original description) 0.878098508946074 53 evm.model.contig_560.12 (at1g10580 : 333.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description) 0.8777597199621395 72 evm.model.contig_2307.2 (at3g52390 : 233.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description) 0.8752644035499436 86 evm.model.contig_462.13 (at4g16700 : 208.0) Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.; phosphatidylserine decarboxylase 1 (PSD1); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Phosphatidylserine decarboxylase (InterPro:IPR005221); Has 2996 Blast hits to 2984 proteins in 1194 species: Archae - 0; Bacteria - 2050; Metazoa - 197; Fungi - 312; Plants - 68; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description) 0.8743003274369769 27 evm.model.contig_603.4 (at5g37850 : 238.0) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.; SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749). & (reliability: 476.0) & (original description: no original description) 0.874068793394423 29 evm.model.contig_4398.13 (at1g03330 : 130.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description) 0.873037798433507 30 evm.model.contig_4619.3 no hits & (original description: no original description) 0.8713404916142417 31 evm.model.contig_2025.62 no hits & (original description: no original description) 0.8706528369878561 33 evm.model.contig_3395.5 (at2g06990 : 496.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (reliability: 992.0) & (original description: no original description) 0.8675764888851231 84 evm.model.contig_2033.26 (at5g14460 : 140.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.8675620125373676 36 evm.model.contig_2112.7 (at2g37560 : 103.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.8659987703698941 37 evm.model.contig_790.1 (at3g06810 : 352.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.8650497463472397 47 evm.model.contig_4476.27 (p49131|tpt_flapr : 166.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Flaveria pringlei & (at5g46110 : 162.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description) 0.8634110165029152 41 evm.model.contig_2345.3 (at1g13980 : 171.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 342.0) & (original description: no original description) 0.8621227833534651 43 evm.model.contig_3397.11 no hits & (original description: no original description) 0.8608771979381893 45 evm.model.contig_4418.20 no hits & (original description: no original description) 0.8607014031460202 84 evm.model.contig_444.18 no hits & (original description: no original description) 0.8603977715991763 47 evm.model.contig_2082.5 no hits & (original description: no original description) 0.859913117999141 48 evm.model.contig_552.2 no hits & (original description: no original description) 0.8540050252016793 51 evm.model.contig_527.24 no hits & (original description: no original description) 0.8537480326980381 52 evm.model.contig_3468.2 (at3g25230 : 92.8) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41649|fkb15_vicfa : 87.4) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 185.6) & (original description: no original description) 0.8508817138878564 61 evm.model.contig_3384.24 no hits & (original description: no original description) 0.8485152520366173 97 evm.model.contig_2051.8 no hits & (original description: no original description) 0.8460480827349571 62 evm.model.contig_4453.1 (at1g02145 : 145.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) 0.8439886866745825 67 evm.model.contig_3426.8 (at5g19485 : 204.0) transferases;nucleotidyltransferases; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT2G34970.1); Has 6119 Blast hits to 5902 proteins in 1501 species: Archae - 491; Bacteria - 3115; Metazoa - 435; Fungi - 482; Plants - 325; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description) 0.8401788540325759 74 evm.model.contig_438.5 (at2g25660 : 96.3) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.8401276533319957 70 evm.model.contig_2121.15 (at2g13440 : 323.0) glucose-inhibited division family A protein; FUNCTIONS IN: FAD binding; INVOLVED IN: tRNA processing, tRNA wobble uridine modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-inhibited division protein A-related (InterPro:IPR002218), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-inhibited division protein A (InterPro:IPR004416), Glucose-inhibited division protein A-related, conserved site (InterPro:IPR020595); Has 12829 Blast hits to 12787 proteins in 2525 species: Archae - 2; Bacteria - 6632; Metazoa - 144; Fungi - 175; Plants - 52; Viruses - 0; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 646.0) & (original description: no original description) 0.8382586328920186 74 evm.model.contig_3433.2 no hits & (original description: no original description) 0.836203408540917 78 evm.model.contig_3396.11 (p19595|ugpa_soltu : 463.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (at5g17310 : 456.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 912.0) & (original description: no original description) 0.8333510280146544 87 evm.model.contig_2020.9 (at1g79790 : 173.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.8333477270681253 88 evm.model.contig_2130.1 no hits & (original description: no original description) 0.8327034111230692 89 evm.model.contig_488.4 (at5g10460 : 180.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 (InterPro:IPR006356); Has 4117 Blast hits to 4117 proteins in 1113 species: Archae - 73; Bacteria - 2243; Metazoa - 198; Fungi - 54; Plants - 37; Viruses - 0; Other Eukaryotes - 1512 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description) 0.8321349200562655 91 evm.model.contig_2085.9 (at5g57440 : 96.3) a member of haloacid dehalogenase-like hydrolase family; GS1; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphatase 1 (TAIR:AT4G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.8318598399220818 93 evm.model.contig_2062.8 (at5g19850 : 156.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description) 0.8316837693000828 94 evm.model.contig_692.1 no hits & (original description: no original description) 0.8315601802930931 95