Sequence Description Alias PCC hrr evm.model.contig_2358.1 no hits & (original description: no original description) 0.9018255989682878 10 evm.model.contig_4479.3 no hits & (original description: no original description) 0.8998146283267909 15 evm.model.contig_2051.24 no hits & (original description: no original description) 0.8982764507369303 5 evm.model.contig_2146.2 (at3g13050 : 127.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter4 (TAIR:AT3G20660.1); Has 38439 Blast hits to 37687 proteins in 2363 species: Archae - 738; Bacteria - 22281; Metazoa - 5017; Fungi - 6515; Plants - 2234; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.8844883062095228 4 evm.model.contig_2051.25 no hits & (original description: no original description) 0.8809968633463225 31 evm.model.contig_724.8 (at1g18040 : 302.0) cyclin-dependent kinase D1;3 (CDKD1;3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 119527 Blast hits to 118054 proteins in 4087 species: Archae - 74; Bacteria - 13556; Metazoa - 44153; Fungi - 12365; Plants - 29368; Viruses - 395; Other Eukaryotes - 19616 (source: NCBI BLink). & (p29620|kc47_orysa : 298.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: no original description) 0.87821830683273 10 evm.model.contig_2275.9 no hits & (original description: no original description) 0.8722398066401132 23 evm.model.contig_2105.3 no hits & (original description: no original description) 0.8656264102193133 13 evm.model.contig_508.1 no hits & (original description: no original description) 0.8629771471170036 9 evm.model.contig_3385.1 no hits & (original description: no original description) 0.8629277297323388 21 evm.model.contig_554.2 no hits & (original description: no original description) 0.8622451650934765 38 evm.model.contig_598.4 no hits & (original description: no original description) 0.8615762577259745 26 evm.model.contig_3397.8 no hits & (original description: no original description) 0.8609653185025764 47 evm.model.contig_2142.9 no hits & (original description: no original description) 0.8584317256189977 20 evm.model.contig_2092.12 (at1g71940 : 89.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G09580.1). & (reliability: 178.0) & (original description: no original description) 0.8580439930427136 15 evm.model.contig_3535.1 (p49661|copd_orysa : 185.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (at5g05010 : 174.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description) 0.8535494974032822 31 evm.model.contig_3483.2 (at4g09570 : 170.0) Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 4 (CPK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 132709 Blast hits to 123975 proteins in 4221 species: Archae - 161; Bacteria - 14258; Metazoa - 49454; Fungi - 17991; Plants - 27137; Viruses - 592; Other Eukaryotes - 23116 (source: NCBI BLink). & (p53684|cdpk3_orysa : 169.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|68872 : 82.8) no description available & (reliability: 328.0) & (original description: no original description) 0.8526486566029886 26 evm.model.contig_444.28 no hits & (original description: no original description) 0.8521984989271159 44 evm.model.contig_4419.9 (p36183|enpl_horvu : 503.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (at4g24190 : 494.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 988.0) & (original description: no original description) 0.8452665568625308 22 evm.model.contig_4429.2 (at1g60990 : 97.1) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G11860.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.8436789668117933 32 evm.model.contig_2142.10 no hits & (original description: no original description) 0.8341413225575578 43 evm.model.contig_2083.10 (at3g61140 : 278.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development.; FUSCA 6 (FUS6); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: COP9 signalosome complex-related / CSN complex-related (TAIR:AT3G12850.1); Has 1199 Blast hits to 1198 proteins in 240 species: Archae - 0; Bacteria - 0; Metazoa - 515; Fungi - 231; Plants - 316; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (q8w425|psmd6_orysa : 82.8) 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) & (reliability: 556.0) & (original description: no original description) 0.8318186505439851 57 evm.model.contig_506.3 (at1g54350 : 362.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 724.0) & (original description: no original description) 0.8314767757684356 42 evm.model.contig_4402.14 (q6k1c4|cax3_orysa : 132.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (at3g51860 : 126.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|68872 : 119.0) no description available & (reliability: 252.0) & (original description: no original description) 0.8277238040556162 28 evm.model.contig_3441.4 no hits & (original description: no original description) 0.8266729026993728 25 evm.model.contig_2341.2 no hits & (original description: no original description) 0.8263302560908803 26 evm.model.contig_2714.5 (at2g02560 : 246.0) Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 492.0) & (original description: no original description) 0.8242233621764078 36 evm.model.contig_2623.5 no hits & (original description: no original description) 0.8239871500587181 68 evm.model.contig_606.1 (at3g01910 : 331.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p39866|nia2_phavu : 221.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 662.0) & (original description: no original description) 0.8197748002458729 29 evm.model.contig_2112.8 (at3g62000 : 138.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (q8h9b6|camt_soltu : 116.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Solanum tuberosum (Potato) & (reliability: 276.0) & (original description: no original description) 0.8162678227738943 99 evm.model.contig_3524.16 no hits & (original description: no original description) 0.81391313208754 32 evm.model.contig_2090.22 (original description: no original description) 0.8134212064397678 33 evm.model.contig_2100.6 (at4g36940 : 270.0) nicotinate phosphoribosyltransferase 1 (NAPRT1); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 2 (TAIR:AT2G23420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description) 0.8103007757708064 34 evm.model.contig_4482.4 (at4g06599 : 295.0) ubiquitin family protein; FUNCTIONS IN: phosphoprotein phosphatase activity; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), HAD-superfamily hydrolase, subfamily IIID (InterPro:IPR011943), NLI interacting factor (InterPro:IPR004274); Has 390 Blast hits to 384 proteins in 126 species: Archae - 0; Bacteria - 8; Metazoa - 131; Fungi - 51; Plants - 106; Viruses - 7; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.808818084048541 35 evm.model.contig_2050.15 no hits & (original description: no original description) 0.8086950765677731 85 evm.model.contig_3555.5 (at3g25800 : 509.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 332.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1018.0) & (original description: no original description) 0.8067713040579005 70 evm.model.contig_2150.18 no hits & (original description: no original description) 0.8049261673346042 83 evm.model.contig_2421.6 no hits & (original description: no original description) 0.8009520769595821 41 evm.model.contig_4398.9 (at5g28850 : 286.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68872 : 88.6) no description available & (reliability: 572.0) & (original description: no original description) 0.7984844885508445 42 evm.model.contig_747.1 no hits & (original description: no original description) 0.7972488338743413 72 evm.model.contig_4565.2 no hits & (original description: no original description) 0.7955304166301096 74 evm.model.contig_438.5 (at2g25660 : 96.3) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.7954066282234656 65 evm.model.contig_3589.1 (at5g60550 : 183.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5n942|sapk4_orysa : 123.0) Serine/threonine-protein kinase SAPK4 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 4) - Oryza sativa (Rice) & (reliability: 366.0) & (original description: no original description) 0.7946968588642841 47 evm.model.contig_2052.5 (at4g24400 : 128.0) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.; CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132609 Blast hits to 130467 proteins in 4740 species: Archae - 192; Bacteria - 15427; Metazoa - 49318; Fungi - 12831; Plants - 32044; Viruses - 538; Other Eukaryotes - 22259 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 122.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 256.0) & (original description: no original description) 0.7936840628269018 67 evm.model.contig_3450.1 no hits & (original description: no original description) 0.7935919458080757 49 evm.model.contig_2020.1 no hits & (original description: no original description) 0.7889106359912533 53 evm.model.contig_735.2 no hits & (original description: no original description) 0.7886042914348578 54 evm.model.contig_2227.3 no hits & (original description: no original description) 0.785162299895488 56 evm.model.contig_2056.15 no hits & (original description: no original description) 0.7843257292694045 57 evm.model.contig_2054.7 no hits & (original description: no original description) 0.7829012415234532 59 evm.model.contig_3483.3 (at5g16850 : 122.0) Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. TERT shows Class II telomerase activity in vitro, indicating that it can initiate de novo telomerase synthesis on non-telomeric DNA, often using a preferred position within the telomerase-bound RNA.; telomerase reverse transcriptase (TERT); FUNCTIONS IN: telomerase activity, telomeric template RNA reverse transcriptase activity; INVOLVED IN: nucleolus organization, telomere maintenance via telomerase, chromosome organization, chromosome localization; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Telomere reverse transcriptase (InterPro:IPR003545), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477), Telomerase ribonucleoprotein complex - RNA-binding domain (InterPro:IPR021891); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8lkw0|tert_orysa : 83.6) Telomerase reverse transcriptase (EC 2.7.7.49) (OsTERT) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: no original description) 0.7796715291056352 67 evm.model.contig_4410.18 (at3g60330 : 639.0) H(+)-ATPase 7 (HA7); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 11 (TAIR:AT5G62670.1). & (q08435|pma1_nicpl : 639.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1278.0) & (original description: no original description) 0.7790455795600245 88 evm.model.contig_4428.1 (at3g18060 : 196.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.7751791994268186 65 evm.model.contig_3441.5 (at3g05840 : 431.0) encodes a SHAGGY-like kinase involved in meristem organization.; ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink). & (p51137|msk1_medsa : 428.0) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (reliability: 838.0) & (original description: no original description) 0.7751292426778497 87 evm.model.contig_3633.1 (at4g00680 : 93.6) actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (p30175|adf_lillo : 92.4) Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) & (reliability: 187.2) & (original description: no original description) 0.7717991572339808 80 evm.model.contig_4438.22 no hits & (original description: no original description) 0.7715929849427692 70 evm.model.contig_2290.1 (gnl|cdd|68872 : 94.0) no description available & (p41040|calm_maize : 82.8) Calmodulin (CaM) - Zea mays (Maize) & (at5g37780 : 80.9) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.7650645666873588 75 evm.model.contig_498.2 (at2g20000 : 222.0) Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.; HOBBIT (HBT); FUNCTIONS IN: binding; INVOLVED IN: in 10 processes; LOCATED IN: anaphase-promoting complex, nucleus, cell plate, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 19127 Blast hits to 10740 proteins in 1344 species: Archae - 1126; Bacteria - 9300; Metazoa - 1888; Fungi - 782; Plants - 572; Viruses - 0; Other Eukaryotes - 5459 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description) 0.7624475670187334 77 evm.model.contig_504.17 no hits & (original description: no original description) 0.7572367421263706 81 evm.model.contig_4529.2 no hits & (original description: no original description) 0.7561111013359321 85 evm.model.contig_618.7 (at1g76140 : 200.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.7541398913155493 86 evm.model.contig_438.7 no hits & (original description: no original description) 0.7504178432696875 92 evm.model.contig_2030.14 no hits & (original description: no original description) 0.7466540826052306 95 evm.model.contig_3401.6 (at3g06730 : 84.3) Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.; Thioredoxin z (TRX z); FUNCTIONS IN: protein-disulfide reductase activity, protein disulfide oxidoreductase activity; INVOLVED IN: plastid organization, cell redox homeostasis; LOCATED IN: thylakoid, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 15064 Blast hits to 14650 proteins in 2900 species: Archae - 204; Bacteria - 8491; Metazoa - 1613; Fungi - 754; Plants - 1355; Viruses - 0; Other Eukaryotes - 2647 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description) 0.7461727651142275 96