Sequence Description Alias PCC hrr evm.model.contig_2163.1 no hits & (original description: no original description) 0.9173279542177933 2 evm.model.contig_2095.8 no hits & (original description: no original description) 0.8871727807697268 11 evm.model.contig_2291.7 no hits & (original description: no original description) 0.8787351957777674 3 evm.model.contig_2045.13 (at3g55200 : 273.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 546.0) & (original description: no original description) 0.8686610449055507 4 evm.model.contig_502.1 (at4g04540 : 144.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (CRK39); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (TAIR:AT4G04570.1); Has 125664 Blast hits to 124100 proteins in 4695 species: Archae - 110; Bacteria - 14484; Metazoa - 46060; Fungi - 11047; Plants - 34830; Viruses - 446; Other Eukaryotes - 18687 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 111.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 288.0) & (original description: no original description) 0.857046415313292 11 evm.model.contig_577.5 no hits & (original description: no original description) 0.8522864098615404 8 evm.model.contig_2625.1 no hits & (original description: no original description) 0.8500487740467151 13 evm.model.contig_2277.1 no hits & (original description: no original description) 0.8458519795899747 8 evm.model.contig_447.11 (p51173|apea_dicdi : 164.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (at2g41460 : 147.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description) 0.8444925546919733 15 evm.model.contig_3391.1 no hits & (original description: no original description) 0.837966485172136 10 evm.model.contig_494.3 (at5g17800 : 85.9) Member of the R2R3 factor gene family.; myb domain protein 56 (MYB56); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.8345523202864915 11 evm.model.contig_731.2 (at5g19450 : 157.0) calcium-dependent protein kinase (CDPK19) mRNA, complete; calcium-dependent protein kinase 19 (CDPK19); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 7 (TAIR:AT5G12480.1); Has 121368 Blast hits to 118532 proteins in 3727 species: Archae - 180; Bacteria - 14366; Metazoa - 46503; Fungi - 14729; Plants - 22919; Viruses - 459; Other Eukaryotes - 22212 (source: NCBI BLink). & (p28582|cdpk_dauca : 154.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 300.0) & (original description: no original description) 0.8343260740663019 12 evm.model.contig_4511.3 no hits & (original description: no original description) 0.8276799417077378 13 evm.model.contig_3465.2 no hits & (original description: no original description) 0.8248396627395066 20 evm.model.contig_4547.5 no hits & (original description: no original description) 0.8230987361725165 24 evm.model.contig_2089.12 no hits & (original description: no original description) 0.819224838511328 32 evm.model.contig_3402.10 (at3g29020 : 96.3) Encodes a putative transcription factor (MYB110).; myb domain protein 110 (MYB110); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 8245 Blast hits to 7670 proteins in 553 species: Archae - 0; Bacteria - 0; Metazoa - 732; Fungi - 497; Plants - 5174; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.8162083740159757 28 evm.model.contig_2141.4 no hits & (original description: no original description) 0.8058834570983311 18 evm.model.contig_3665.1 (at4g04570 : 140.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (CRK40); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (TAIR:AT4G04540.1); Has 124722 Blast hits to 123224 proteins in 4702 species: Archae - 112; Bacteria - 14410; Metazoa - 45924; Fungi - 10629; Plants - 34402; Viruses - 448; Other Eukaryotes - 18797 (source: NCBI BLink). & (p17801|kpro_maize : 114.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 252.0) & (original description: no original description) 0.8053955468634333 35 evm.model.contig_2020.33 no hits & (original description: no original description) 0.8039598856731882 50 evm.model.contig_2045.8 (original description: no original description) 0.7999161857688152 36 evm.model.contig_2080.5 no hits & (original description: no original description) 0.7957977721693831 69 evm.model.contig_3508.3 no hits & (original description: no original description) 0.788529457010583 23 evm.model.contig_929.1 no hits & (original description: no original description) 0.7758843822133091 24 evm.model.contig_3538.2 no hits & (original description: no original description) 0.7741678530759661 43 evm.model.contig_2113.7 (original description: no original description) 0.7722725359983146 36 evm.model.contig_2423.2 no hits & (original description: no original description) 0.7698240675868752 72 evm.model.contig_2315.5 no hits & (original description: no original description) 0.7696744700186626 35 evm.model.contig_2288.3 (at3g08720 : 122.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (p47997|g11a_orysa : 94.4) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: no original description) 0.768992447668826 90 evm.model.contig_849.2 no hits & (original description: no original description) 0.7666740807960067 89 evm.model.contig_577.8 no hits & (original description: no original description) 0.7651280817349569 64 evm.model.contig_2034.4 no hits & (original description: no original description) 0.7649828908842019 88 evm.model.contig_594.6 (at3g27870 : 281.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description) 0.7647128533227545 34 evm.model.contig_3550.1 (gnl|cdd|34653 : 141.0) no description available & (at3g08870 : 138.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 126249 Blast hits to 124574 proteins in 5056 species: Archae - 117; Bacteria - 14623; Metazoa - 46287; Fungi - 11015; Plants - 35222; Viruses - 451; Other Eukaryotes - 18534 (source: NCBI BLink). & (o24585|cri4_maize : 97.8) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 254.0) & (original description: no original description) 0.7636329445394451 70 evm.model.contig_2150.19 no hits & (original description: no original description) 0.7634957884838047 36 evm.model.contig_4416.12 no hits & (original description: no original description) 0.7589043689975794 40 evm.model.contig_2293.2 no hits & (original description: no original description) 0.7577268326195302 100 evm.model.contig_2190.15 no hits & (original description: no original description) 0.7549170857385844 42 evm.model.contig_486.2 no hits & (original description: no original description) 0.7491083270672505 44 evm.model.contig_2447.1 no hits & (original description: no original description) 0.7448701476045365 81 evm.model.contig_4532.2 (at1g48410 : 365.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (reliability: 690.0) & (original description: no original description) 0.7310115918951912 69 evm.model.contig_2493.5 (original description: no original description) 0.7302158369951248 73 evm.model.contig_2575.1 no hits & (original description: no original description) 0.7283107497880945 97 evm.model.contig_2440.1 no hits & (original description: no original description) 0.7264587661488751 54 evm.model.contig_3391.5 no hits & (original description: no original description) 0.7248867708699686 55 evm.model.contig_3399.7 no hits & (original description: no original description) 0.7232384482596996 100 evm.model.contig_3450.7 no hits & (original description: no original description) 0.72218336286815 57 evm.model.contig_4559.1 no hits & (original description: no original description) 0.7186467069983079 94 evm.model.contig_2420.1 no hits & (original description: no original description) 0.717350141526872 62 evm.model.contig_579.11 no hits & (original description: no original description) 0.7171880930312644 63 evm.model.contig_2179.7 no hits & (original description: no original description) 0.7115156992378013 99 evm.model.contig_2150.1 no hits & (original description: no original description) 0.7051809787465676 73 evm.model.contig_431.3 (at2g34180 : 120.0) Encodes CBL-interacting protein kinase 13 (CIPK13).; CBL-interacting protein kinase 13 (CIPK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: root, pollen tube; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 18 (TAIR:AT1G29230.1); Has 130054 Blast hits to 127991 proteins in 4467 species: Archae - 168; Bacteria - 15242; Metazoa - 47793; Fungi - 12893; Plants - 31934; Viruses - 521; Other Eukaryotes - 21503 (source: NCBI BLink). & (p53681|crk_dauca : 115.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 240.0) & (original description: no original description) 0.7046583648218562 75 evm.model.contig_669.11 no hits & (original description: no original description) 0.7019776197872203 77 evm.model.contig_530.7 no hits & (original description: no original description) 0.6986563749448204 82