Sequence Description Alias PCC hrr evm.model.contig_4428.10 (at2g25100 : 229.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description) 0.9218125309751415 34 evm.model.contig_2053.7 no hits & (original description: no original description) 0.9011441094639802 31 evm.model.contig_3415.4 (original description: no original description) 0.8991572972781116 21 evm.model.contig_603.5 no hits & (original description: no original description) 0.8912419218954646 56 evm.model.contig_4501.4 no hits & (original description: no original description) 0.88866268681674 93 evm.model.contig_2190.5 (at4g31120 : 317.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description) 0.8779563223618312 90 evm.model.contig_715.1 (at4g17140 : 116.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 232.0) & (original description: no original description) 0.8721685323136242 48 evm.model.contig_467.3 (at4g25120 : 144.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description) 0.8710466589313333 84 evm.model.contig_2090.44 no hits & (original description: no original description) 0.8709607675297311 54 evm.model.contig_4456.17 (at2g38280 : 659.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 652.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (reliability: 1318.0) & (original description: no original description) 0.8693492947683407 52 evm.model.contig_531.9 (at4g18810 : 184.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1). & (reliability: 368.0) & (original description: no original description) 0.8686503965390816 41 evm.model.contig_3415.5 no hits & (original description: no original description) 0.8684722067238739 93 evm.model.contig_2281.8 (original description: no original description) 0.8667532340191126 40 evm.model.contig_494.5 no hits & (original description: no original description) 0.8649757541274109 68 evm.model.contig_2094.9 no hits & (original description: no original description) 0.8646008909722273 80 evm.model.contig_522.3 no hits & (original description: no original description) 0.8622902740437847 85 evm.model.contig_603.4 (at5g37850 : 238.0) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.; SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749). & (reliability: 476.0) & (original description: no original description) 0.8619336073687373 39 evm.model.contig_2097.2 no hits & (original description: no original description) 0.8602114659020152 35 evm.model.contig_3437.1 (at1g16900 : 153.0) curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein; Alg9-like mannosyltransferase family; FUNCTIONS IN: sugar binding, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.2); Has 817 Blast hits to 803 proteins in 193 species: Archae - 0; Bacteria - 22; Metazoa - 302; Fungi - 301; Plants - 91; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.8570904022071385 38 evm.model.contig_3397.11 no hits & (original description: no original description) 0.8557937272857211 40 evm.model.contig_555.3 (at4g12790 : 200.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G22370.2); Has 1465 Blast hits to 1454 proteins in 282 species: Archae - 123; Bacteria - 0; Metazoa - 415; Fungi - 412; Plants - 158; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.8557922264568704 41 evm.model.contig_2717.3 (gnl|cdd|68872 : 106.0) no description available & (at5g06830 : 102.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 (InterPro:IPR008491); Has 365 Blast hits to 359 proteins in 109 species: Archae - 9; Bacteria - 13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8556562028095784 98 evm.model.contig_2120.2 (q94fy8|tocc_maize : 169.0) Probable tocopherol cyclase, chloroplast precursor (Sucrose export defective 1) - Zea mays (Maize) & (at4g32770 : 167.0) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.; VITAMIN E DEFICIENT 1 (VTE1); FUNCTIONS IN: tocopherol cyclase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, plastoglobule, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description) 0.8532760689477158 54 evm.model.contig_2514.2 no hits & (original description: no original description) 0.8506422022966955 53 evm.model.contig_4404.16 no hits & (original description: no original description) 0.8484833646415488 57 evm.model.contig_2016.13 (at1g02880 : 139.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase1 (TPK1); FUNCTIONS IN: thiamin diphosphokinase activity; INVOLVED IN: thiamin metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase 2 (TAIR:AT2G44750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.8458000765024861 82 evm.model.contig_2156.4 (at3g46220 : 96.3) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2042 (InterPro:IPR018611). & (reliability: 192.6) & (original description: no original description) 0.8421339848785508 71 evm.model.contig_2112.7 (at2g37560 : 103.0) Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.; origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.841834600926586 78