Sequence Description Alias PCC hrr evm.model.contig_2012.1 (at5g66120 : 352.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.955066931261186 1 evm.model.contig_541.4 no hits & (original description: no original description) 0.9352162688195128 4 evm.model.contig_612.2 (at5g61540 : 138.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.9072579751049117 20 evm.model.contig_2187.5 (at5g26110 : 149.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Kinase-associated endopeptidase 1, Bud32 (InterPro:IPR022495), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.9040620947889916 21 evm.model.contig_601.3 no hits & (original description: no original description) 0.8995863032210614 5 evm.model.contig_2027.6 no hits & (original description: no original description) 0.8980501974570536 8 evm.model.contig_3423.39 (at4g29060 : 100.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.8943922669315185 7 evm.model.contig_2291.1 no hits & (original description: no original description) 0.8863374188515208 32 evm.model.contig_4496.3 (at5g42820 : 165.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.8848295477641281 9 evm.model.contig_2059.14 (at5g56760 : 187.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (reliability: 374.0) & (original description: no original description) 0.8837359565356941 10 evm.model.contig_2090.41 no hits & (original description: no original description) 0.8819731518279844 11 evm.model.contig_477.4 no hits & (original description: no original description) 0.8817234456948836 12 evm.model.contig_2069.9 no hits & (original description: no original description) 0.881467013940493 13 evm.model.contig_2173.10 no hits & (original description: no original description) 0.8743877965832165 25 evm.model.contig_2386.1 no hits & (original description: no original description) 0.8742653321886754 18 evm.model.contig_2681.3 no hits & (original description: no original description) 0.8709797011681832 16 evm.model.contig_2468.8 no hits & (original description: no original description) 0.8687335231076846 27 evm.model.contig_4506.5 no hits & (original description: no original description) 0.8676874401261079 18 evm.model.contig_2027.3 no hits & (original description: no original description) 0.8641617213112833 21 evm.model.contig_4416.15 no hits & (original description: no original description) 0.8619285199921441 20 evm.model.contig_3528.2 (at4g38240 : 116.0) Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.; COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139). & (reliability: 232.0) & (original description: no original description) 0.8603056019248772 21 evm.model.contig_3766.1 no hits & (original description: no original description) 0.859890391317942 48 evm.model.contig_2272.1 (at1g51350 : 117.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1374 Blast hits to 1058 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 493; Fungi - 490; Plants - 280; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (gnl|cdd|68872 : 102.0) no description available & (reliability: 234.0) & (original description: no original description) 0.8555578036484058 23 evm.model.contig_2622.8 no hits & (original description: no original description) 0.8550885501428159 24 evm.model.contig_3502.1 no hits & (original description: no original description) 0.854974809903991 40 evm.model.contig_3452.5 (at3g04710 : 100.0) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (reliability: 200.0) & (original description: no original description) 0.8547563815213204 34 evm.model.contig_4427.2 no hits & (original description: no original description) 0.8540069481786469 37 evm.model.contig_2130.4 no hits & (original description: no original description) 0.8538461412494066 28 evm.model.contig_2169.5 no hits & (original description: no original description) 0.8515920766477797 29 evm.model.contig_2175.4 (at3g43700 : 92.8) BTB-POZ and MATH domain 6 (BPM6); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 7239 Blast hits to 7013 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 5298; Fungi - 161; Plants - 1386; Viruses - 66; Other Eukaryotes - 328 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description) 0.8499205637531934 30 evm.model.contig_765.1 no hits & (original description: no original description) 0.848681648068264 31 evm.model.contig_2396.3 no hits & (original description: no original description) 0.846422026626196 32 evm.model.contig_2136.6 no hits & (original description: no original description) 0.8456502867559557 50 evm.model.contig_512.12 no hits & (original description: no original description) 0.8455807780459449 34 evm.model.contig_2386.2 no hits & (original description: no original description) 0.8437084045226575 35 evm.model.contig_2216.2 no hits & (original description: no original description) 0.8392747579459279 36 evm.model.contig_3765.1 no hits & (original description: no original description) 0.8277972788880422 39 evm.model.contig_4440.3 (q7x7l3|elp3_orysa : 778.0) Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) & (at5g50320 : 767.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; ELONGATA 3 (ELO3); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Histone acetyltransferase ELP3 (InterPro:IPR005910), Radical SAM (InterPro:IPR007197), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1534.0) & (original description: no original description) 0.8275663851274736 62 evm.model.contig_815.2 no hits & (original description: no original description) 0.8251130474444568 39 evm.model.contig_2099.4 no hits & (original description: no original description) 0.8237182654105527 40 evm.model.contig_2189.5 no hits & (original description: no original description) 0.8232860692573775 71 evm.model.contig_2027.4 no hits & (original description: no original description) 0.8218056726353086 42 evm.model.contig_2055.8 no hits & (original description: no original description) 0.8215724450087363 62 evm.model.contig_2626.1 (at5g12040 : 297.0) Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, zinc ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (TAIR:AT4G08790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q3hvn1|agub_soltu : 87.8) N-carbamoylputrescine amidase (EC 3.5.1.53) - Solanum tuberosum (Potato) & (reliability: 594.0) & (original description: no original description) 0.8207081066224049 44 evm.model.contig_2185.1 no hits & (original description: no original description) 0.8204158443205053 45 evm.model.contig_2316.6 (at5g39440 : 186.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 169.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 372.0) & (original description: no original description) 0.8133435930432373 72 evm.model.contig_2494.14 no hits & (original description: no original description) 0.809632106421907 86 evm.model.contig_2066.2 no hits & (original description: no original description) 0.8072477085444576 53 evm.model.contig_4622.1 no hits & (original description: no original description) 0.8040962701012389 54 evm.model.contig_531.17 no hits & (original description: no original description) 0.7986851386731925 56 evm.model.contig_2092.9 (original description: no original description) 0.7983485775897525 58 evm.model.contig_517.2 no hits & (original description: no original description) 0.7974465799972271 59 evm.model.contig_4416.14 no hits & (original description: no original description) 0.7964999188246803 60 evm.model.contig_2022.4 no hits & (original description: no original description) 0.7937047523845898 62 evm.model.contig_2094.5 no hits & (original description: no original description) 0.7895336564707935 69 evm.model.contig_636.3 no hits & (original description: no original description) 0.7878998082893591 65 evm.model.contig_3571.2 (at3g07270 : 113.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.7864697243018479 66 evm.model.contig_3617.1 no hits & (original description: no original description) 0.7845129896413671 68 evm.model.contig_4570.1 no hits & (original description: no original description) 0.782453442299419 69 evm.model.contig_3404.11 no hits & (original description: no original description) 0.7793827866923443 96 evm.model.contig_2045.11 no hits & (original description: no original description) 0.7793488111573318 71 evm.model.contig_2687.2 (at5g02710 : 112.0) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description) 0.7790364851089834 99 evm.model.contig_4462.9 no hits & (original description: no original description) 0.7775328417643523 82 evm.model.contig_2036.11 no hits & (original description: no original description) 0.7735800392056342 77 evm.model.contig_472.16 (at3g54210 : 159.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (o80363|rk17_tobac : 156.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (reliability: 318.0) & (original description: no original description) 0.7729367513257821 79 evm.model.contig_2695.1 (at5g52800 : 129.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.7721432522252002 82 evm.model.contig_435.3 no hits & (original description: no original description) 0.7705678197799747 84 evm.model.contig_3401.23 no hits & (original description: no original description) 0.7681125079830544 85 evm.model.contig_3652.1 no hits & (original description: no original description) 0.7651518444386994 90 evm.model.contig_532.8 no hits & (original description: no original description) 0.7640628080164017 91 evm.model.contig_4416.4 no hits & (original description: no original description) 0.7610538223184989 95 evm.model.contig_711.2 no hits & (original description: no original description) 0.7579417647783266 99 evm.model.contig_787.2 no hits & (original description: no original description) 0.7575958745907261 100