Sequence Description Alias PCC hrr evm.model.contig_2033.31 no hits & (original description: no original description) 0.9101247770596153 16 evm.model.contig_3546.1 (at4g02260 : 263.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description) 0.9090626292181729 2 evm.model.contig_468.7 no hits & (original description: no original description) 0.9078886101104042 10 evm.model.contig_4501.1 no hits & (original description: no original description) 0.9055718585283241 4 evm.model.contig_3397.26 (at4g27040 : 188.0) VPS22; CONTAINS InterPro DOMAIN/s: ESCRT-2 complex, Snf8 (InterPro:IPR016689), EAP30 (InterPro:IPR007286); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description) 0.8955819208472469 5 evm.model.contig_724.7 (at1g14790 : 350.0) Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 700.0) & (original description: no original description) 0.8950665130263847 8 evm.model.contig_4401.7 no hits & (original description: no original description) 0.8924714468021123 7 evm.model.contig_2194.1 no hits & (original description: no original description) 0.8876102757022615 20 evm.model.contig_538.4 no hits & (original description: no original description) 0.8859947810948816 29 evm.model.contig_3411.1 (at1g18260 : 84.3) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.8847672414669947 10 evm.model.contig_2083.2 (at5g01310 : 108.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8841903841108717 11 evm.model.contig_2343.8 (original description: no original description) 0.8810676743571276 14 evm.model.contig_497.7 (at1g09300 : 224.0) Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description) 0.8750082897899547 13 evm.model.contig_457.7 no hits & (original description: no original description) 0.8747630646626371 14 evm.model.contig_4418.12 (at1g77680 : 359.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (reliability: 718.0) & (original description: no original description) 0.8739815880861518 20 evm.model.contig_3618.3 no hits & (original description: no original description) 0.8724264457224685 20 evm.model.contig_596.1 no hits & (original description: no original description) 0.8698227467391094 19 evm.model.contig_2094.8 (at4g39910 : 213.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.8685456909865397 18 evm.model.contig_602.1 no hits & (original description: no original description) 0.8679145323622152 19 evm.model.contig_3436.1 no hits & (original description: no original description) 0.8662305087168684 20 evm.model.contig_2157.19 no hits & (original description: no original description) 0.864597546128979 22 evm.model.contig_3637.3 no hits & (original description: no original description) 0.8631528035030608 23 evm.model.contig_2008.6 no hits & (original description: no original description) 0.862724206691616 23 evm.model.contig_2269.1 no hits & (original description: no original description) 0.8625513157208966 24 evm.model.contig_478.3 no hits & (original description: no original description) 0.8620152447032735 25 evm.model.contig_4431.7 (at4g15880 : 94.7) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description) 0.8613451255759507 26 evm.model.contig_2502.13 no hits & (original description: no original description) 0.8607153783139736 51 evm.model.contig_594.4 no hits & (original description: no original description) 0.8605575383234255 69 evm.model.contig_2347.16 no hits & (original description: no original description) 0.8599624389289192 29 evm.model.contig_3486.8 no hits & (original description: no original description) 0.8591151197048043 30 evm.model.contig_2494.33 no hits & (original description: no original description) 0.8588402225959803 31 evm.model.contig_3585.1 no hits & (original description: no original description) 0.8586088082910673 81 evm.model.contig_2094.7 no hits & (original description: no original description) 0.8580248871126448 33 evm.model.contig_2494.7 no hits & (original description: no original description) 0.8574660751186951 34 evm.model.contig_2208.3 no hits & (original description: no original description) 0.8562450657625634 42 evm.model.contig_2068.23 no hits & (original description: no original description) 0.8556522604530421 50 evm.model.contig_3601.9 no hits & (original description: no original description) 0.8546976393571829 37 evm.model.contig_494.6 no hits & (original description: no original description) 0.8541823698725868 38 evm.model.contig_3421.5 no hits & (original description: no original description) 0.8531321040732114 39 evm.model.contig_4425.6 no hits & (original description: no original description) 0.8520285228125712 40 evm.model.contig_4424.9 no hits & (original description: no original description) 0.8520141623962421 41 evm.model.contig_2084.19 (original description: no original description) 0.8517309231530528 42 evm.model.contig_2315.3 (at4g35760 : 124.0) Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid.; NAD(P)H dehydrogenase (quinone)s; FUNCTIONS IN: NAD(P)H dehydrogenase (quinone) activity; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin K epoxide reductase (InterPro:IPR012932), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.8511520137295168 77 evm.model.contig_2715.1 (at5g55580 : 114.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.8504737946368143 48 evm.model.contig_2291.6 no hits & (original description: no original description) 0.8502844547221972 65 evm.model.contig_2036.8 (at3g10350 : 227.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 428.0) & (original description: no original description) 0.8488457282080718 67 evm.model.contig_4419.4 (at4g21540 : 120.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.8478225386273693 58 evm.model.contig_3412.3 no hits & (original description: no original description) 0.847682162255542 89 evm.model.contig_3524.9 (at1g80360 : 137.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description) 0.8455372118553444 50 evm.model.contig_2510.1 (at5g46910 : 200.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description) 0.8453013753064949 51 evm.model.contig_2623.4 no hits & (original description: no original description) 0.8451351571954745 52 evm.model.contig_2118.10 (at1g08540 : 233.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description) 0.8435779849910874 61 evm.model.contig_3395.6 no hits & (original description: no original description) 0.8431827760478968 55 evm.model.contig_2117.1 (at5g52580 : 160.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (reliability: 320.0) & (original description: no original description) 0.8429095912023559 55 evm.model.contig_444.5 (at4g15900 : 360.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 708.0) & (original description: no original description) 0.8388186001305862 56 evm.model.contig_4418.11 no hits & (original description: no original description) 0.8376654104491507 95 evm.model.contig_488.3 no hits & (original description: no original description) 0.8366360903652613 59 evm.model.contig_474.5 (at5g35980 : 192.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 109.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (reliability: 384.0) & (original description: no original description) 0.8352721974130826 60 evm.model.contig_457.6 (at5g14460 : 103.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.834711618684409 61 evm.model.contig_565.5 no hits & (original description: no original description) 0.8327817073497059 62 evm.model.contig_2528.1 (at3g13772 : 82.8) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.831730061719461 63 evm.model.contig_3661.2 (at1g16540 : 136.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 125.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 272.0) & (original description: no original description) 0.8314672479088524 64 evm.model.contig_2282.19 no hits & (original description: no original description) 0.8311214293876616 65 evm.model.contig_2059.4 no hits & (original description: no original description) 0.8296968552610059 67 evm.model.contig_4438.18 no hits & (original description: no original description) 0.8295852810433906 68 evm.model.contig_2339.1 no hits & (original description: no original description) 0.8283932437252147 92 evm.model.contig_4404.10 no hits & (original description: no original description) 0.8263002672262515 71 evm.model.contig_2350.4 no hits & (original description: no original description) 0.8254352205499852 73 evm.model.contig_4446.6 (at1g63610 : 131.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description) 0.8252016408405833 74 evm.model.contig_497.6 (at3g02060 : 382.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 764.0) & (original description: no original description) 0.8249395801832806 75 evm.model.contig_2032.5 no hits & (original description: no original description) 0.824817137443818 76 evm.model.contig_545.11 (at3g56840 : 168.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.823401188624939 79 evm.model.contig_3524.11 (at1g64630 : 286.0) with no lysine (K) kinase 10 (WNK10); FUNCTIONS IN: kinase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 8 (TAIR:AT5G41990.1); Has 106075 Blast hits to 105172 proteins in 3001 species: Archae - 77; Bacteria - 10484; Metazoa - 38155; Fungi - 10128; Plants - 29410; Viruses - 406; Other Eukaryotes - 17415 (source: NCBI BLink). & (q84ui5|mpk1_orysa : 82.0) Mitogen-activated protein kinase 1 (EC 2.7.11.24) (MAP kinase 1) (MAP kinase 6) (OsMAPK6) (OsSIPK) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: no original description) 0.8224663164811673 80 evm.model.contig_482.16 (at2g35450 : 158.0) catalytics;hydrolases; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 2 (InterPro:IPR006992); Has 1373 Blast hits to 1373 proteins in 381 species: Archae - 4; Bacteria - 1000; Metazoa - 6; Fungi - 6; Plants - 45; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (reliability: 316.0) & (original description: no original description) 0.8207326108862452 91 evm.model.contig_518.2 no hits & (original description: no original description) 0.8184927171750906 83 evm.model.contig_2077.13 (at2g13370 : 595.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 419.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1190.0) & (original description: no original description) 0.8180042984828068 94 evm.model.contig_544.4 (at1g28060 : 160.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description) 0.8154889744749592 88 evm.model.contig_479.11 (at2g26650 : 98.6) Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; K+ transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ion transport (InterPro:IPR005821), Ankyrin repeat-containing domain (InterPro:IPR020683), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 86170 Blast hits to 36402 proteins in 1811 species: Archae - 161; Bacteria - 9078; Metazoa - 42367; Fungi - 8163; Plants - 4219; Viruses - 1188; Other Eukaryotes - 20994 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 92.4) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 197.2) & (original description: no original description) 0.8131576522115294 92 evm.model.contig_4458.7 (at1g55460 : 126.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description) 0.8128521808506338 93 evm.model.contig_4424.4 no hits & (original description: no original description) 0.811987176690525 95 evm.model.contig_4404.22 no hits & (original description: no original description) 0.8089367020554966 98 evm.model.contig_592.1 (at4g13550 : 86.3) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (reliability: 172.6) & (original description: no original description) 0.8071968894887801 100