Sequence Description Alias PCC hrr evm.model.contig_3400.2 no hits & (original description: no original description) 0.950355779312778 1 evm.model.contig_611.6 (at3g10530 : 299.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), BING4, C-terminal (InterPro:IPR012952), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 9286 Blast hits to 5748 proteins in 422 species: Archae - 16; Bacteria - 3151; Metazoa - 2206; Fungi - 2085; Plants - 594; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description) 0.9431795249258391 2 evm.model.contig_3435.13 (at1g77030 : 345.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (p46942|db10_nicsy : 155.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 690.0) & (original description: no original description) 0.9405382214660549 9 evm.model.contig_2116.5 no hits & (original description: no original description) 0.9349665155034435 4 evm.model.contig_4508.2 (at3g16170 : 305.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (p31687|4cl2_soybn : 121.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (reliability: 610.0) & (original description: no original description) 0.9337920619513277 5 evm.model.contig_3401.15 (at4g15770 : 210.0) RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome assembly, ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosome biogenesis factor NIP7-like (InterPro:IPR005155), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Ribosome biogenesis factor, NIP7 (InterPro:IPR016686); Has 438 Blast hits to 438 proteins in 213 species: Archae - 5; Bacteria - 0; Metazoa - 151; Fungi - 132; Plants - 49; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.9319905605679756 6 evm.model.contig_856.2 no hits & (original description: no original description) 0.9307619198421732 7 evm.model.contig_4446.20 (at3g11450 : 217.0) DnaJ domain ;Myb-like DNA-binding domain; FUNCTIONS IN: heat shock protein binding, DNA binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), MYB-like (InterPro:IPR017877), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT5G06110.2); Has 60375 Blast hits to 43868 proteins in 3410 species: Archae - 228; Bacteria - 14410; Metazoa - 19184; Fungi - 5541; Plants - 3499; Viruses - 192; Other Eukaryotes - 17321 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description) 0.9282584403165153 25 evm.model.contig_444.13 (at4g38470 : 185.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17801|kpro_maize : 111.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 370.0) & (original description: no original description) 0.9255735360592612 9 evm.model.contig_3441.14 (at2g35920 : 595.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1190.0) & (original description: no original description) 0.9162818320762419 27 evm.model.contig_3451.10 (at3g18600 : 515.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p46942|db10_nicsy : 185.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1030.0) & (original description: no original description) 0.9137341212223705 11 evm.model.contig_3515.6 (at3g55620 : 347.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (o81920|if6_betvu : 279.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (reliability: 694.0) & (original description: no original description) 0.9088326347418942 12 evm.model.contig_667.5 (at4g34740 : 503.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 486.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (reliability: 1006.0) & (original description: no original description) 0.9086735387226966 49 evm.model.contig_2299.6 no hits & (original description: no original description) 0.9043285802030907 14 evm.model.contig_2051.4 (at4g34910 : 262.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (p41380|if4a3_nicpl : 84.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 524.0) & (original description: no original description) 0.9028339401566416 85 evm.model.contig_2273.7 (at5g19300 : 172.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.9015255454241591 16 evm.model.contig_437.6 no hits & (original description: no original description) 0.8976604659669055 26 evm.model.contig_3624.3 no hits & (original description: no original description) 0.8955619085892867 18 evm.model.contig_4432.7 (at2g03270 : 345.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 690.0) & (original description: no original description) 0.8927197061995208 19 evm.model.contig_4443.11 no hits & (original description: no original description) 0.8919071557463446 83 evm.model.contig_2511.2 no hits & (original description: no original description) 0.8901117934617292 22 evm.model.contig_3491.5 (at5g05450 : 337.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 164.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 640.0) & (original description: no original description) 0.88728581215612 52 evm.model.contig_2058.2 no hits & (original description: no original description) 0.8870108327096226 24 evm.model.contig_451.2 (at1g79950 : 448.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of transcription, DNA-dependent, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20720.1); Has 3149 Blast hits to 2661 proteins in 831 species: Archae - 223; Bacteria - 987; Metazoa - 718; Fungi - 431; Plants - 207; Viruses - 6; Other Eukaryotes - 577 (source: NCBI BLink). & (reliability: 896.0) & (original description: no original description) 0.8858553396763351 25 evm.model.contig_3401.1 (at4g27340 : 180.0) Met-10+ like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56120.1); Has 1666 Blast hits to 1640 proteins in 617 species: Archae - 405; Bacteria - 591; Metazoa - 172; Fungi - 146; Plants - 123; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description) 0.8856360245308691 30 evm.model.contig_3397.9 no hits & (original description: no original description) 0.8816169870716584 44 evm.model.contig_2284.4 no hits & (original description: no original description) 0.8800777487187044 30 evm.model.contig_2096.24 no hits & (original description: no original description) 0.8761397959956928 31 evm.model.contig_3443.3 no hits & (original description: no original description) 0.8757886229012414 32 evm.model.contig_3494.7 no hits & (original description: no original description) 0.8732497882828345 34 evm.model.contig_4461.11 (at5g61770 : 211.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.8731092001947577 35 evm.model.contig_4438.25 (p37384|dmc1_lillo : 322.0) Meiotic recombination protein DMC1 homolog - Lilium longiflorum (Trumpet lily) & (at3g22880 : 319.0) Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.; DISRUPTION OF MEIOTIC CONTROL 1 (DMC1); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, meiosis, chiasma assembly, reciprocal meiotic recombination, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), ATPase, AAA+ type, core (InterPro:IPR003593), Meiotic recombinase Dmc1 (InterPro:IPR011940), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51 (TAIR:AT5G20850.1); Has 11998 Blast hits to 11924 proteins in 3797 species: Archae - 689; Bacteria - 8026; Metazoa - 742; Fungi - 447; Plants - 503; Viruses - 22; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description) 0.872730479475831 36 evm.model.contig_3453.3 (at2g28880 : 463.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (reliability: 926.0) & (original description: no original description) 0.8704151037212062 40 evm.model.contig_2288.1 (at5g24850 : 276.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q651u1|cryd_orysa : 267.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 552.0) & (original description: no original description) 0.8698254411032877 86 evm.model.contig_4456.9 (q6z2l5|kprs1_orysa : 350.0) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1) - Oryza sativa (Rice) & (at2g35390 : 339.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 678.0) & (original description: no original description) 0.8663864180958863 45 evm.model.contig_2169.1 (at4g19210 : 887.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1774.0) & (original description: no original description) 0.865825686941304 46 evm.model.contig_2612.7 no hits & (original description: no original description) 0.8638218445463506 49 evm.model.contig_441.30 no hits & (original description: no original description) 0.8636576830530667 50 evm.model.contig_4438.26 no hits & (original description: no original description) 0.8635533079933061 51 evm.model.contig_2088.9 (at1g67120 : 411.0) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 822.0) & (original description: no original description) 0.8620056127296245 70 evm.model.contig_4424.1 no hits & (original description: no original description) 0.8610299072185985 53 evm.model.contig_2096.9 no hits & (original description: no original description) 0.8566542582576406 57 evm.model.contig_4418.19 (at1g76810 : 696.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (p57997|if2c_phavu : 119.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (gnl|cdd|68872 : 89.3) no description available & (reliability: 1392.0) & (original description: no original description) 0.8561585403629294 73 evm.model.contig_2146.11 (at5g60540 : 138.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.8552286344820159 60 evm.model.contig_2350.5 (at5g65560 : 173.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 167.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 316.0) & (original description: no original description) 0.8543490716991907 61 evm.model.contig_2018.3 (at1g52160 : 330.0) Encodes a tRNase Z.; tRNAse Z3 (TRZ3); BEST Arabidopsis thaliana protein match is: tRNAse Z4 (TAIR:AT3G16260.1); Has 6463 Blast hits to 4305 proteins in 1644 species: Archae - 441; Bacteria - 4471; Metazoa - 273; Fungi - 252; Plants - 107; Viruses - 0; Other Eukaryotes - 919 (source: NCBI BLink). & (reliability: 660.0) & (original description: no original description) 0.8517722376091948 63 evm.model.contig_460.3 (at1g17690 : 218.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description) 0.8517400600231735 94 evm.model.contig_4478.1 no hits & (original description: no original description) 0.8465005294139556 70 evm.model.contig_2122.17 no hits & (original description: no original description) 0.8428861910900621 73 evm.model.contig_3384.6 (at3g13870 : 115.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description) 0.8418041764412948 75 evm.model.contig_2033.2 (at1g80480 : 142.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|68872 : 117.0) no description available & (reliability: 284.0) & (original description: no original description) 0.8415908059899511 76 evm.model.contig_441.28 no hits & (original description: no original description) 0.8373412687986376 85 evm.model.contig_2084.4 (at3g49660 : 178.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93107|pf20_chlre : 150.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 356.0) & (original description: no original description) 0.836671994723953 86 evm.model.contig_2025.7 (at4g02120 : 575.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (reliability: 1150.0) & (original description: no original description) 0.8354463282119307 89 evm.model.contig_658.1 no hits & (original description: no original description) 0.8350560762705928 90 evm.model.contig_2295.3 no hits & (original description: no original description) 0.8347374643286785 96 evm.model.contig_450.3 (at3g62310 : 264.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|68872 : 106.0) no description available & (reliability: 520.0) & (original description: no original description) 0.8344829780313661 92 evm.model.contig_464.3 no hits & (original description: no original description) 0.8336362220173208 94 evm.model.contig_4505.2 (at2g17700 : 207.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (q8l4h4|nork_medtr : 92.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 414.0) & (original description: no original description) 0.8334360168840856 95 evm.model.contig_3601.6 (at4g08960 : 257.0) phosphotyrosyl phosphatase activator (PTPA) family protein; FUNCTIONS IN: phosphatase activator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphotyrosyl phosphatase activator, PTPA (InterPro:IPR004327); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description) 0.8319416707545346 97 evm.model.contig_518.2 no hits & (original description: no original description) 0.8312467612270438 99