Sequence Description Alias PCC hrr evm.model.contig_3421.3 (at4g35740 : 295.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.7955353601502915 37 evm.model.contig_560.4 no hits & (original description: no original description) 0.7914398500256644 22 evm.model.contig_541.8 no hits & (original description: no original description) 0.7884502480460407 7 evm.model.contig_2103.1 (at3g11900 : 104.0) encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.; aromatic and neutral transporter 1 (ANT1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4625 Blast hits to 4600 proteins in 287 species: Archae - 17; Bacteria - 63; Metazoa - 1652; Fungi - 791; Plants - 1313; Viruses - 9; Other Eukaryotes - 780 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.7822376897666371 43 evm.model.contig_2025.52 no hits & (original description: no original description) 0.7785910907576548 13 evm.model.contig_3618.2 no hits & (original description: no original description) 0.7650790060649028 69 evm.model.contig_636.2 (at3g63250 : 168.0) Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.; homocysteine methyltransferase 2 (HMT2); FUNCTIONS IN: homocysteine S-methyltransferase activity; INVOLVED IN: methionine biosynthetic process, S-methylmethionine cycle; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fum9|hmt2_maize : 166.0) Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) & (reliability: 336.0) & (original description: no original description) 0.7631643290519499 34 evm.model.contig_3383.8 no hits & (original description: no original description) 0.7573827527708209 30 evm.model.contig_785.1 (at5g12290 : 87.8) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.; DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.7538411795252448 22 evm.model.contig_615.3 no hits & (original description: no original description) 0.7418360437056839 89 evm.model.contig_431.6 (at1g60170 : 97.1) embryo defective 1220 (emb1220); CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOSIC (InterPro:IPR012976), Prp31 C-terminal (InterPro:IPR019175); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70400.1); Has 1596 Blast hits to 1590 proteins in 356 species: Archae - 207; Bacteria - 2; Metazoa - 385; Fungi - 430; Plants - 224; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.7311008743218378 54 evm.model.contig_2032.24 no hits & (original description: no original description) 0.714920025250586 26 evm.model.contig_3432.4 no hits & (original description: no original description) 0.7039193027523889 43 evm.model.contig_4446.4 (at3g24010 : 100.0) ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; INHIBITOR OF GROWTH 1 (ING1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger protein-related (TAIR:AT1G54390.3); Has 1560 Blast hits to 1473 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 910; Fungi - 445; Plants - 120; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description) 0.6982131779458796 81 evm.model.contig_863.1 no hits & (original description: no original description) 0.696055224218908 42 evm.model.contig_2284.27 no hits & (original description: no original description) 0.6940963728813518 56 evm.model.contig_433.1 no hits & (original description: no original description) 0.6922526268124566 45 evm.model.contig_4462.1 no hits & (original description: no original description) 0.6872942603960133 48 evm.model.contig_2262.5 no hits & (original description: no original description) 0.6866894439628078 50 evm.model.contig_4416.11 no hits & (original description: no original description) 0.6860086451185218 52 evm.model.contig_2008.2 (at4g33470 : 140.0) Encodes HDA14, a member of the histone deacetylase family proteins.; histone deacetylase 14 (hda14); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.6803586591036453 54 evm.model.contig_2413.1 (at3g08870 : 114.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 126249 Blast hits to 124574 proteins in 5056 species: Archae - 117; Bacteria - 14623; Metazoa - 46287; Fungi - 11015; Plants - 35222; Viruses - 451; Other Eukaryotes - 18534 (source: NCBI BLink). & (p93194|rpk1_iponi : 82.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 212.0) & (original description: no original description) 0.6622140546502838 83 evm.model.contig_531.1 no hits & (original description: no original description) 0.6547489493883932 92 evm.model.contig_2320.2 no hits & (original description: no original description) 0.6542199989777259 89 evm.model.contig_2059.31 no hits & (original description: no original description) 0.6483175949617049 98