Sequence Description Alias PCC hrr PSME_00024185-RA (at2g18220 : 557.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 494.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (reliability: 1114.0) & (original description: no original description) 0.827453369010755 14 PSME_00013355-RA (at5g26830 : 897.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (reliability: 1794.0) & (original description: no original description) 0.8073405350745272 30 PSME_00017969-RA (at2g07050 : 603.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 1206.0) & (original description: no original description) 0.7919346031095873 93 PSME_00036253-RA (at1g65430 : 465.0) ARIADNE 8 (ARI8); FUNCTIONS IN: ubiquitin-protein ligase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 2973 Blast hits to 2950 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1311; Fungi - 559; Plants - 644; Viruses - 3; Other Eukaryotes - 456 (source: NCBI BLink). & (reliability: 930.0) & (original description: no original description) 0.7917093898399811 16 PSME_00004177-RA (p31405|vata_goshi : 1143.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Gossypium hirsutum (Upland cotton) & (at1g78900 : 1113.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2226.0) & (original description: no original description) 0.7892127361972454 20 PSME_00014483-RA (at1g03280 : 283.0) Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 759 Blast hits to 706 proteins in 191 species: Archae - 5; Bacteria - 10; Metazoa - 313; Fungi - 190; Plants - 108; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description) 0.7862251261816627 100 PSME_00003032-RA (at1g06290 : 764.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (o64894|acox2_cucma : 330.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1528.0) & (original description: no original description) 0.7801055907992261 60 PSME_00018130-RA (at4g31420 : 394.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 788.0) & (original description: no original description) 0.767458840648562 91 PSME_00002354-RA (at5g06600 : 1600.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3198.0) & (original description: no original description) 0.7623985264419846 76 PSME_00006584-RA (at3g17810 : 561.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (reliability: 1122.0) & (original description: no original description) 0.7614514902753892 68 PSME_00055657-RA (at3g01160 : 177.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description) 0.7565069302256601 73 PSME_00013626-RA (p49661|copd_orysa : 651.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (at5g05010 : 644.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 1288.0) & (original description: no original description) 0.7562911808689433 75 PSME_00010519-RA (at4g25730 : 721.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (reliability: 1442.0) & (original description: no original description) 0.752192604012529 88 PSME_00011156-RA (at3g06860 : 1007.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (q39659|mfpa_cucsa : 1006.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 2014.0) & (original description: no original description) 0.7517744297223643 87