Sequence Description Alias PCC hrr PSME_00036776-RA (at4g11880 : 97.8) AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots.; AGAMOUS-like 14 (AGL14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 19 (TAIR:AT4G22950.1); Has 7256 Blast hits to 7253 proteins in 915 species: Archae - 0; Bacteria - 4; Metazoa - 632; Fungi - 309; Plants - 6224; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (q9xj60|mad50_orysa : 94.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 195.6) & (original description: no original description) 0.7607711676045797 74 PSME_00028994-RA no hits & (original description: no original description) 0.7064845577977353 58 PSME_00034484-RA (at2g47000 : 865.0) Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.; ATP binding cassette subfamily B4 (ABCB4); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 21 (TAIR:AT3G62150.1); Has 844144 Blast hits to 390751 proteins in 4168 species: Archae - 14748; Bacteria - 659498; Metazoa - 17847; Fungi - 13026; Plants - 10001; Viruses - 45; Other Eukaryotes - 128979 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 454.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1730.0) & (original description: no original description) 0.6994196282325539 66 PSME_00032620-RA (at5g16980 : 89.4) Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cyclopentenone; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1). & (reliability: 178.8) & (original description: no original description) 0.697766492719155 84 PSME_00030966-RA no hits & (original description: no original description) 0.6905913825692589 50 PSME_00008450-RA (at2g41250 : 176.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description) 0.6872573557665009 52 PSME_00011132-RA (at4g08170 : 167.0) Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold (InterPro:IPR011761), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G33770.1). & (q84y01|itpk1_maize : 109.0) Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol-triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4-trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (ZmIpk) (Low phytic acid protein 2) - Zea mays (Maize) & (reliability: 334.0) & (original description: no original description) 0.6820572570824635 71 PSME_00040406-RA (at5g65760 : 199.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.6702582032576689 68 PSME_00000188-RA (at1g69850 : 609.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (reliability: 1218.0) & (original description: no original description) 0.654485460404469 84 PSME_00034362-RA (q75l11|h2a6_orysa : 184.0) Probable histone H2A.6 - Oryza sativa (Rice) & (at5g02560 : 179.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 358.0) & (original description: no original description) 0.6461867993596597 99 PSME_00005743-RA (original description: no original description) 0.6449758925169347 92 PSME_00033138-RA (at2g36660 : 211.0) polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.; poly(A) binding protein 7 (PAB7); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 517049 Blast hits to 488607 proteins in 21541 species: Archae - 10464; Bacteria - 293370; Metazoa - 110143; Fungi - 18083; Plants - 34749; Viruses - 34404; Other Eukaryotes - 15836 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.6398913380935483 98 PSME_00053156-RA (at1g48000 : 177.0) Encodes a putative transcription factor (MYB112).; myb domain protein 112 (MYB112); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 78 (TAIR:AT5G49620.1); Has 8716 Blast hits to 8036 proteins in 469 species: Archae - 0; Bacteria - 0; Metazoa - 760; Fungi - 469; Plants - 5758; Viruses - 6; Other Eukaryotes - 1723 (source: NCBI BLink). & (q4jl76|myba2_orysa : 164.0) Myb-related protein MYBAS2 - Oryza sativa (Rice) & (reliability: 354.0) & (original description: no original description) 0.6390885128401067 99