Sequence Description Alias PCC hrr PSME_00001372-RA (at5g55550 : 256.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (p19682|roc3_nicsy : 86.3) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 512.0) & (original description: no original description) 0.8777713371836336 3 PSME_00027847-RA (at1g19835 : 137.0) Plant protein of unknown function (DUF869); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G47900.2). & (reliability: 274.0) & (original description: no original description) 0.8476662672894536 15 PSME_00007812-RA (q9xhm1|if38_medtr : 1028.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 1008.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (reliability: 2016.0) & (original description: no original description) 0.8389531808392734 97 PSME_00013250-RA (at2g44710 : 263.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description) 0.8353775760669357 49 PSME_00027127-RA (at2g44710 : 289.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 578.0) & (original description: no original description) 0.8335208115461281 81 PSME_00035988-RA (at2g44710 : 321.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 642.0) & (original description: no original description) 0.8268277818268517 59 PSME_00020165-RA (at1g22870 : 455.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-type fold (InterPro:IPR016024), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 26365 Blast hits to 24990 proteins in 1293 species: Archae - 12; Bacteria - 3236; Metazoa - 8918; Fungi - 4021; Plants - 3829; Viruses - 24; Other Eukaryotes - 6325 (source: NCBI BLink). & (reliability: 910.0) & (original description: no original description) 0.821533453733102 14 PSME_00022823-RA (at5g04930 : 1015.0) Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.; aminophospholipid ATPase 1 (ALA1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), HAD superfamily hydrolase-like, type 3 (InterPro:IPR013200); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G13900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2030.0) & (original description: no original description) 0.82091501748366 51 PSME_00024969-RA (at5g48385 : 372.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description) 0.8190774746786773 76 PSME_00015263-RA (at1g63700 : 612.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 134.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1224.0) & (original description: no original description) 0.8184507376237872 97 PSME_00016191-RA (at5g04590 : 927.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q42997|nir_orysa : 110.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Oryza sativa (Rice) & (reliability: 1854.0) & (original description: no original description) 0.8138592661141227 25 PSME_00006633-RA (at1g10170 : 1162.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (reliability: 2324.0) & (original description: no original description) 0.8137437541382415 80 PSME_00023534-RA (at2g22610 : 141.0) Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT1G72250.2). & (q9xj60|mad50_orysa : 98.2) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 282.0) & (original description: no original description) 0.8111950480031416 86 PSME_00053438-RA (q9mt28|thrc_soltu : 737.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 722.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (reliability: 1444.0) & (original description: no original description) 0.8000477673258946 82 PSME_00034866-RA (at5g08260 : 193.0) serine carboxypeptidase-like 35 (scpl35); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 34 (TAIR:AT5G23210.1); Has 3632 Blast hits to 3579 proteins in 366 species: Archae - 0; Bacteria - 189; Metazoa - 629; Fungi - 858; Plants - 1539; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink). & (p08819|cbp2_wheat : 149.0) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 386.0) & (original description: no original description) 0.7963195105796409 100 PSME_00037779-RA (at5g57610 : 487.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (p17801|kpro_maize : 98.6) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 974.0) & (original description: no original description) 0.7943019482994558 78 PSME_00020272-RA (at4g12750 : 470.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 940.0) & (original description: no original description) 0.7892946640716134 52 PSME_00003874-RA (at4g33170 : 590.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 55398 Blast hits to 13784 proteins in 253 species: Archae - 0; Bacteria - 15; Metazoa - 97; Fungi - 52; Plants - 54672; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1180.0) & (original description: no original description) 0.7849081054533575 61 PSME_00003148-RA (at3g16857 : 139.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description) 0.7753721240910324 85