Sequence Description Alias PCC hrr PSME_00037054-RA (at3g48930 : 246.0) embryo defective 1080 (EMB1080); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: ribosomal protein S11-beta (TAIR:AT5G23740.1); Has 1290 Blast hits to 1288 proteins in 469 species: Archae - 240; Bacteria - 242; Metazoa - 305; Fungi - 148; Plants - 140; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). & (p17093|rs11_soybn : 246.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (reliability: 492.0) & (original description: no original description) 0.8613470263069469 19 PSME_00034734-RA (at5g04800 : 198.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT2G04390.1); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description) 0.8146334828210933 41 PSME_00040312-RA (at5g35530 : 390.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 780.0) & (original description: no original description) 0.8135356154312956 41 PSME_00001605-RA (q08069|rs8_maize : 279.0) 40S ribosomal protein S8 - Zea mays (Maize) & (at5g59240 : 270.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.8114678746244507 52 PSME_00018456-RA (at5g20890 : 538.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (p54411|tcpe2_avesa : 143.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1076.0) & (original description: no original description) 0.8072714523231168 18 PSME_00015787-RA (at5g46020 : 125.0) CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.8011231100415149 35 PSME_00037698-RA (q42857|ssg1_ipoba : 292.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Ipomoea batatas (Sweet potato) (Batate) & (at1g32900 : 290.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.7988081810123313 40 PSME_00014555-RA no hits & (original description: no original description) 0.798013178375352 47 PSME_00037630-RA (o82627|ssg1_antma : 251.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase I) (GBSS-I) - Antirrhinum majus (Garden snapdragon) & (at1g32900 : 247.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description) 0.7929974747376775 39 PSME_00010533-RA (at5g27850 : 302.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e (InterPro:IPR000039), Ribosomal protein L18e/L15 (InterPro:IPR021131); BEST Arabidopsis thaliana protein match is: ribosomal protein L18 (TAIR:AT3G05590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o65729|rl18_cicar : 280.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 604.0) & (original description: no original description) 0.7837235390955032 99 PSME_00050459-RA (o82627|ssg1_antma : 132.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase I) (GBSS-I) - Antirrhinum majus (Garden snapdragon) & (at1g32900 : 121.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description) 0.7819450288457257 56 PSME_00027135-RA (at5g67510 : 172.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT3G49910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39411|rl26_brara : 150.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (reliability: 344.0) & (original description: no original description) 0.7812098560149757 94 PSME_00035263-RA (q42857|ssg1_ipoba : 357.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Ipomoea batatas (Sweet potato) (Batate) & (at1g32900 : 352.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.7799355034536379 35 PSME_00007814-RA (at5g40810 : 185.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (p25076|cy11_soltu : 185.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (reliability: 370.0) & (original description: no original description) 0.7758447502308197 31 PSME_00030732-RA (at5g39740 : 409.0) Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.; ribosomal protein L5 B (RPL5B); FUNCTIONS IN: structural constituent of ribosome, 5S rRNA binding; INVOLVED IN: cell proliferation, translation, ribosome biogenesis, leaf morphogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 (TAIR:AT3G25520.1). & (q6unt2|rl5_cucsa : 409.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (reliability: 818.0) & (original description: no original description) 0.7755330020079458 94 PSME_00015854-RA (at5g23540 : 511.0) Mov34/MPN/PAD-1 family protein; INVOLVED IN: response to salt stress, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1); Has 1553 Blast hits to 1553 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 704; Fungi - 411; Plants - 244; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). & (reliability: 1022.0) & (original description: no original description) 0.7751302322190774 90 PSME_00021577-RA (at2g20840 : 297.0) Secretory carrier membrane protein (SCAMP) family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G03550.1); Has 686 Blast hits to 684 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 14; Plants - 230; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 594.0) & (original description: no original description) 0.7746083598722553 67 PSME_00035517-RA (at2g34840 : 153.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: COPI vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT1G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.7728582206260607 37 PSME_00003378-RA (at3g46210 : 253.0) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1). & (reliability: 506.0) & (original description: no original description) 0.7725253644230503 39 PSME_00005366-RA (at1g47260 : 282.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 2 (GAMMA CA2); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: response to salt stress, regulation of oxygen and reactive oxygen species metabolic process, anther dehiscence, photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 1 (TAIR:AT1G19580.1); Has 12062 Blast hits to 12006 proteins in 2273 species: Archae - 302; Bacteria - 8576; Metazoa - 53; Fungi - 108; Plants - 233; Viruses - 0; Other Eukaryotes - 2790 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description) 0.7718763942492416 35 PSME_00001606-RA (q08069|rs8_maize : 279.0) 40S ribosomal protein S8 - Zea mays (Maize) & (at5g20290 : 270.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G59240.1); Has 1084 Blast hits to 1080 proteins in 433 species: Archae - 252; Bacteria - 1; Metazoa - 368; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.7715946236301825 82 PSME_00001833-RA (at4g17170 : 168.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p36863|yptv4_volca : 165.0) GTP-binding protein yptV4 (RAB2 homolog) - Volvox carteri & (reliability: 336.0) & (original description: no original description) 0.7695931742587844 88 PSME_00051690-RA (o82528|rl15_pethy : 311.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (at4g16720 : 297.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 594.0) & (original description: no original description) 0.7689371980083107 100 PSME_00050361-RA (at4g27435 : 199.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.7659308521122509 79 PSME_00017628-RA (at5g08180 : 197.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1). & (reliability: 394.0) & (original description: no original description) 0.764218172327804 44 PSME_00003787-RA (at2g01170 : 733.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1466.0) & (original description: no original description) 0.7630799515371393 29 PSME_00000090-RA (at5g58420 : 423.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46300|rs4_soltu : 419.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (reliability: 846.0) & (original description: no original description) 0.7627739930038735 69 PSME_00008918-RA (at2g26980 : 450.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 433.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 900.0) & (original description: no original description) 0.7592446664068039 46 PSME_00037112-RA (at1g18270 : 394.0) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (reliability: 788.0) & (original description: no original description) 0.7592165382539795 69 PSME_00028297-RA (at5g53530 : 377.0) Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; vacuolar protein sorting 26A (VPS26A); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26B (TAIR:AT4G27690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 754.0) & (original description: no original description) 0.759120643433643 96 PSME_00010622-RA (at4g02450 : 116.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description) 0.7546694117188373 53 PSME_00004480-RA (o82627|ssg1_antma : 266.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase I) (GBSS-I) - Antirrhinum majus (Garden snapdragon) & (at1g32900 : 259.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description) 0.7544750472198656 85 PSME_00028715-RA (at4g28510 : 419.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description) 0.7544242986959562 68 PSME_00050831-RA (at4g34900 : 94.7) xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description) 0.7535472003077727 37 PSME_00035895-RA (at4g35260 : 290.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29696|leu3_soltu : 140.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 580.0) & (original description: no original description) 0.7515038884477248 38 PSME_00018921-RA (at5g65750 : 400.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 800.0) & (original description: no original description) 0.7488517621736903 46 PSME_00051325-RA (at1g69550 : 199.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description) 0.7486801582686148 88 PSME_00006889-RA (at3g05530 : 267.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (o23894|prs6a_bracm : 267.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (reliability: 534.0) & (original description: no original description) 0.7449932989916721 42 PSME_00011086-RA (p35685|rl7a_orysa : 336.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (at3g62870 : 323.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G47610.1); Has 2083 Blast hits to 2081 proteins in 414 species: Archae - 338; Bacteria - 1; Metazoa - 718; Fungi - 357; Plants - 268; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 646.0) & (original description: no original description) 0.7423116820147165 70 PSME_00027168-RA (at1g18260 : 348.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description) 0.7421469905912187 45 PSME_00027142-RA (at2g37770 : 333.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23901|aldr_horvu : 204.0) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (reliability: 666.0) & (original description: no original description) 0.7421338862550425 46 PSME_00034983-RA (at1g06700 : 185.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G30740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description) 0.7414457742754705 77 PSME_00009106-RA (at4g33650 : 259.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (reliability: 518.0) & (original description: no original description) 0.7359917398278533 55 PSME_00001033-RA (at4g34960 : 139.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16085 Blast hits to 16059 proteins in 2650 species: Archae - 108; Bacteria - 6649; Metazoa - 2891; Fungi - 1367; Plants - 1258; Viruses - 4; Other Eukaryotes - 3808 (source: NCBI BLink). & (q39613|cyph_catro : 89.4) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 278.0) & (original description: no original description) 0.7344086648639891 52 PSME_00026436-RA (at5g35410 : 220.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 173.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 440.0) & (original description: no original description) 0.7338245148473249 53 PSME_00005935-RA (at3g11964 : 210.0) RNA binding;RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: mRNA processing, RNA processing; LOCATED IN: nucleolus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), RNA-processing protein, HAT helix (InterPro:IPR003107), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G51110.1); Has 43836 Blast hits to 19683 proteins in 2824 species: Archae - 141; Bacteria - 33398; Metazoa - 1103; Fungi - 905; Plants - 756; Viruses - 0; Other Eukaryotes - 7533 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.7328021643077983 54 PSME_00028910-RA (at3g03610 : 301.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT1G03620.1); Has 825 Blast hits to 825 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 44; Plants - 173; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description) 0.732644923001276 55 PSME_00048421-RA (at2g34590 : 604.0) Transketolase family protein; FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding, transketolase activity; INVOLVED IN: pollen tube development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 14271 Blast hits to 14261 proteins in 2406 species: Archae - 196; Bacteria - 9106; Metazoa - 476; Fungi - 223; Plants - 259; Viruses - 0; Other Eukaryotes - 4011 (source: NCBI BLink). & (q9mur4|odpb_mesvi : 416.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (reliability: 1184.0) & (original description: no original description) 0.7281590505614788 58 PSME_00010569-RA (q9lsu0|psa3_orysa : 409.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) - Oryza sativa (Rice) & (at2g27020 : 405.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 810.0) & (original description: no original description) 0.7268664875271089 59 PSME_00046907-RA (at2g45200 : 159.0) Encodes a member of the GOS1 (Golgi SNARE) gene family.; golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1). & (reliability: 318.0) & (original description: no original description) 0.7268404765149348 60 PSME_00004849-RA (at4g12790 : 347.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G22370.2); Has 1465 Blast hits to 1454 proteins in 282 species: Archae - 123; Bacteria - 0; Metazoa - 415; Fungi - 412; Plants - 158; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (reliability: 694.0) & (original description: no original description) 0.7251191578339122 61 PSME_00011985-RA (p27608|arof_tobac : 276.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 271.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (reliability: 542.0) & (original description: no original description) 0.7159711845112634 63 PSME_00027495-RA (at3g21690 : 517.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (reliability: 1034.0) & (original description: no original description) 0.7130362914977275 92 PSME_00017169-RA (at5g67590 : 172.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.707642054561851 78 PSME_00028437-RA (at1g50370 : 377.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: flower-specific, phytochrome-associated protein phosphatase 3 (TAIR:AT3G19980.1); Has 6872 Blast hits to 6704 proteins in 524 species: Archae - 81; Bacteria - 295; Metazoa - 2372; Fungi - 1410; Plants - 974; Viruses - 10; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 227.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: no original description) 0.7053633105630329 74 PSME_00001232-RA (p41918|rana1_tobac : 361.0) GTP-binding nuclear protein Ran-A1 - Nicotiana tabacum (Common tobacco) & (at5g55190 : 358.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAN GTPase 3 (RAN3); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: protein import into nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAS-related nuclear protein-1 (TAIR:AT5G20010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 716.0) & (original description: no original description) 0.7053556241879355 75 PSME_00010508-RA (at3g19970 : 168.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.7045826679334494 76 PSME_00009561-RA (at2g21620 : 82.4) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.7008642758487298 94 PSME_00049458-RA (at1g48160 : 137.0) signal recognition particle 19 kDa protein, putative / SRP19, putative; FUNCTIONS IN: 7S RNA binding; INVOLVED IN: protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP19 subunit (InterPro:IPR002778); Has 500 Blast hits to 499 proteins in 236 species: Archae - 81; Bacteria - 0; Metazoa - 158; Fungi - 144; Plants - 60; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (p49964|srp19_orysa : 127.0) Signal recognition particle 19 kDa protein (SRP19) - Oryza sativa (Rice) & (reliability: 274.0) & (original description: no original description) 0.6989865964102997 84 PSME_00015295-RA (at1g60620 : 201.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description) 0.6981606386032208 86 PSME_00050206-RA (at1g34300 : 114.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 88.2) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 216.0) & (original description: no original description) 0.6975565937298344 88 PSME_00050333-RA (q41009|toc34_pea : 124.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (at5g05000 : 122.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.6957090993623671 91 PSME_00019468-RA (at1g30400 : 210.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.6945274108846646 94 PSME_00020645-RA (at3g55000 : 211.0) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.; TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.6943607085697681 95