Sequence Description Alias PCC hrr PSME_00016470-RA (at1g55620 : 602.0) Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen.; chloride channel F (CLC-F); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: Golgi apparatus, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.1); Has 8626 Blast hits to 8538 proteins in 2008 species: Archae - 276; Bacteria - 6042; Metazoa - 796; Fungi - 384; Plants - 229; Viruses - 0; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1204.0) & (original description: no original description) 0.9249633489142723 2 PSME_00017732-RA (at4g34450 : 1333.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 2666.0) & (original description: no original description) 0.9179949357879204 6 PSME_00004498-RA (at1g52360 : 1407.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (p93107|pf20_chlre : 99.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2814.0) & (original description: no original description) 0.913147756929966 16 PSME_00008159-RA (at4g21150 : 542.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (reliability: 1084.0) & (original description: no original description) 0.9102643000927568 7 PSME_00001540-RA (o24578|pura_maize : 690.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) - Zea mays (Maize) & (at3g57610 : 688.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (reliability: 1376.0) & (original description: no original description) 0.9098726364541116 5 PSME_00051512-RA (at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 108.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3620.0) & (original description: no original description) 0.90767585228446 19 PSME_00016707-RA (p31251|ube12_wheat : 1493.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 1473.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 2946.0) & (original description: no original description) 0.9039436345000809 24 PSME_00005245-RA (at3g03810 : 642.0) embryo sac development arrest 30 (EDA30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, polar nucleus fusion, pollen tube development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G30300.1); Has 810 Blast hits to 792 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1284.0) & (original description: no original description) 0.9028649846652583 10 PSME_00029779-RA (at2g14740 : 999.0) Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.; vaculolar sorting receptor 3 (VSR3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor 4 (TAIR:AT2G14720.2); Has 14459 Blast hits to 6347 proteins in 253 species: Archae - 2; Bacteria - 131; Metazoa - 13188; Fungi - 10; Plants - 479; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (p93484|vsr1_pea : 979.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (reliability: 1998.0) & (original description: no original description) 0.9018483937157332 22 PSME_00025338-RA (at3g10050 : 427.0) first enzyme in the biosynthetic pathway of isoleucine; L-O-methylthreonine resistant 1 (OMR1); FUNCTIONS IN: L-threonine ammonia-lyase activity; INVOLVED IN: isoleucine biosynthetic process, threonine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Threonine dehydratase I (InterPro:IPR005787), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Threonine dehydratase, C-terminal (InterPro:IPR001721), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: serine racemase (TAIR:AT4G11640.1); Has 26917 Blast hits to 26860 proteins in 2759 species: Archae - 692; Bacteria - 18712; Metazoa - 552; Fungi - 889; Plants - 577; Viruses - 2; Other Eukaryotes - 5493 (source: NCBI BLink). & (q39469|thd1_cicar : 243.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (reliability: 854.0) & (original description: no original description) 0.9010574601752104 10 PSME_00030522-RA (at3g19553 : 665.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31830.1); Has 17325 Blast hits to 17313 proteins in 2020 species: Archae - 295; Bacteria - 14688; Metazoa - 803; Fungi - 534; Plants - 429; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink). & (reliability: 1330.0) & (original description: no original description) 0.9004100818238691 11 PSME_00016793-RA (at3g20050 : 487.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (p54411|tcpe2_avesa : 139.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 974.0) & (original description: no original description) 0.8992868755226535 12 PSME_00004528-RA (p25076|cy11_soltu : 425.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 422.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 844.0) & (original description: no original description) 0.8987385283899043 13 PSME_00020533-RA (at4g15475 : 587.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1174.0) & (original description: no original description) 0.8974478920175062 20 PSME_00031685-RA (at3g60860 : 2385.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 4770.0) & (original description: no original description) 0.8970183568049653 51 PSME_00003765-RA (at2g23140 : 613.0) RING/U-box superfamily protein with ARM repeat domain; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G67340.1). & (q64ha9|spl11_orysa : 240.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 1226.0) & (original description: no original description) 0.8968387182858992 16 PSME_00004511-RA (at5g15270 : 293.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (reliability: 586.0) & (original description: no original description) 0.894081726950406 54 PSME_00014556-RA (o64937|ef1a_orysa : 851.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (at5g60390 : 846.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1692.0) & (original description: no original description) 0.893372497588613 19 PSME_00021832-RA (at4g26100 : 518.0) Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization.; casein kinase 1 (CK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasmodesma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 12 (TAIR:AT5G57015.1); Has 62578 Blast hits to 62222 proteins in 2324 species: Archae - 33; Bacteria - 9966; Metazoa - 23829; Fungi - 6469; Plants - 10923; Viruses - 370; Other Eukaryotes - 10988 (source: NCBI BLink). & (reliability: 1036.0) & (original description: no original description) 0.8932997667756268 19 PSME_00000034-RA (at4g29520 : 235.0) LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 470.0) & (original description: no original description) 0.8906994654425909 20 PSME_00047211-RA "(at1g30210 : 134.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; ""TEOSINTE BRANCHED 1, cycloidea, and PCF family 24"" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)" 0.8887229340135673 21 PSME_00003888-RA (at5g11560 : 571.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1142.0) & (original description: no original description) 0.8873762687745194 22 PSME_00005695-RA (at5g16210 : 1187.0) HEAT repeat-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), LisH dimerisation motif (InterPro:IPR006594), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2374.0) & (original description: no original description) 0.8867231778578888 23 PSME_00009246-RA (at5g63840 : 1271.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04931|aglu_betvu : 303.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Beta vulgaris (Sugar beet) & (reliability: 2542.0) & (original description: no original description) 0.8863811475045134 55 PSME_00050344-RA (at1g20780 : 301.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (q64ha9|spl11_orysa : 85.5) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 602.0) & (original description: no original description) 0.8856041583352583 25 PSME_00024483-RA (at4g01560 : 319.0) maternal effect embryo arrest 49 (MEE49); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G63780.1); Has 893 Blast hits to 882 proteins in 227 species: Archae - 2; Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description) 0.8830007068357814 26 PSME_00007118-RA (at1g14670 : 447.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT2G01970.1); Has 1574 Blast hits to 1525 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 610; Fungi - 249; Plants - 451; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description) 0.8825339378961449 27 PSME_00008437-RA (at2g34410 : 843.0) O-acetyltransferase family protein; FUNCTIONS IN: O-acetyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT1G29890.2). & (reliability: 1686.0) & (original description: no original description) 0.881833967892118 28 PSME_00018920-RA (at5g65750 : 301.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description) 0.8812586671109697 39 PSME_00038847-RA (at3g01180 : 114.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (q43093|ssg2_pea : 114.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (GBSS-II) - Pisum sativum (Garden pea) & (reliability: 228.0) & (original description: no original description) 0.8797373394047212 30 PSME_00006773-RA (at5g19690 : 349.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description) 0.8796387330627962 31 PSME_00011312-RA (at5g16150 : 603.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41144|stc_ricco : 135.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1206.0) & (original description: no original description) 0.879510133764768 38 PSME_00002523-RA (at4g39080 : 1061.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2122.0) & (original description: no original description) 0.8791000273977518 41 PSME_00022451-RA (p68173|sahh_tobac : 879.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 869.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (reliability: 1738.0) & (original description: no original description) 0.8781628692140686 34 PSME_00010789-RA (at4g30600 : 791.0) signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink). & (p49969|sr542_horvu : 131.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 1582.0) & (original description: no original description) 0.877786575971286 35 PSME_00033520-RA (q2qmx9|aca1_orysa : 1323.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (at4g37640 : 1298.0) Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.; calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). & (reliability: 2596.0) & (original description: no original description) 0.8762085764174059 44 PSME_00000131-RA (at5g50920 : 1361.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 1356.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 2722.0) & (original description: no original description) 0.8762046149675163 37 PSME_00024678-RA (at4g29790 : 534.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1068.0) & (original description: no original description) 0.8758618327199755 91 PSME_00055740-RA (p93596|cp51_wheat : 564.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) (Fragment) - Triticum aestivum (Wheat) & (at1g11680 : 562.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (reliability: 1124.0) & (original description: no original description) 0.8757456107674672 39 PSME_00027719-RA (at5g38470 : 294.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23D (RAD23D); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: response to cold, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), XPC-binding domain (InterPro:IPR015360), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT3G02540.3); Has 11236 Blast hits to 6362 proteins in 878 species: Archae - 4; Bacteria - 655; Metazoa - 4543; Fungi - 1476; Plants - 2522; Viruses - 172; Other Eukaryotes - 1864 (source: NCBI BLink). & (q40742|rad23_orysa : 256.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (reliability: 588.0) & (original description: no original description) 0.875177710124893 40 PSME_00007725-RA (at3g53230 : 1417.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 1411.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2834.0) & (original description: no original description) 0.872892923795258 41 PSME_00022630-RA (at1g75440 : 182.0) ubiquitin-conjugating enzyme 16 (UBC16); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0; Bacteria - 2; Metazoa - 3895; Fungi - 1929; Plants - 1614; Viruses - 20; Other Eukaryotes - 1336 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description) 0.8728627950621526 42 PSME_00001751-RA no hits & (original description: no original description) 0.8722637611422642 43 PSME_00012559-RA (at1g16780 : 1241.0) Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.; VHP2;2; FUNCTIONS IN: inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: vacuolar H+-pyrophosphatase 2 (TAIR:AT1G78920.2); Has 6490 Blast hits to 6472 proteins in 788 species: Archae - 67; Bacteria - 1308; Metazoa - 5; Fungi - 1; Plants - 281; Viruses - 0; Other Eukaryotes - 4828 (source: NCBI BLink). & (p21616|avp_phaau : 425.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 2482.0) & (original description: no original description) 0.8719337226965546 44 PSME_00000528-RA (at2g16920 : 869.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (reliability: 1738.0) & (original description: no original description) 0.8713785977931194 45 PSME_00014230-RA (at4g38630 : 419.0) Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities; regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description) 0.8709560186488368 46 PSME_00054902-RA (at1g20780 : 114.0) Encodes a protein containing a U-box and an ARM domain.; senescence-associated E3 ubiquitin ligase 1 (SAUL1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of chlorophyll catabolic process, regulation of chlorophyll biosynthetic process, leaf senescence, regulation of abscisic acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G76390.2); Has 2790 Blast hits to 2660 proteins in 201 species: Archae - 0; Bacteria - 20; Metazoa - 434; Fungi - 161; Plants - 1969; Viruses - 3; Other Eukaryotes - 203 (source: NCBI BLink). & (q64ha9|spl11_orysa : 97.8) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 228.0) & (original description: no original description) 0.8705613502295718 47 PSME_00000877-RA (at5g43100 : 605.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G50050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6yny7|asp1_orysa : 95.9) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 1210.0) & (original description: no original description) 0.8704593554732276 68 PSME_00041582-RA (at1g43690 : 580.0) ubiquitin interaction motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin interacting motif (InterPro:IPR003903); Has 368 Blast hits to 347 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 1160.0) & (original description: no original description) 0.8703281503508281 95 PSME_00002806-RA (at3g19740 : 352.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 101.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 704.0) & (original description: no original description) 0.869226334467464 50 PSME_00008938-RA (at1g79940 : 848.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (reliability: 1696.0) & (original description: no original description) 0.8689663163077571 61 PSME_00043108-RA (at1g56070 : 1512.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1506.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 3024.0) & (original description: no original description) 0.868649658022739 53 PSME_00013040-RA (p17614|atpbm_nicpl : 758.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g08690 : 713.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1426.0) & (original description: no original description) 0.8676543512672424 62 PSME_00039717-RA (at1g67930 : 996.0) Golgi transport complex protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 5 (InterPro:IPR019465); Has 4471 Blast hits to 590 proteins in 146 species: Archae - 0; Bacteria - 79; Metazoa - 393; Fungi - 221; Plants - 65; Viruses - 7; Other Eukaryotes - 3706 (source: NCBI BLink). & (reliability: 1992.0) & (original description: no original description) 0.8668417045535844 80 PSME_00023479-RA (at3g62200 : 352.0) Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain (TAIR:AT5G61190.1); Has 3997 Blast hits to 3396 proteins in 338 species: Archae - 0; Bacteria - 122; Metazoa - 1660; Fungi - 937; Plants - 691; Viruses - 43; Other Eukaryotes - 544 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.8659790151726137 55 PSME_00026180-RA (at5g23890 : 250.0) LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description) 0.8645669669438635 57 PSME_00005306-RA (p49608|acoc_cucma : 1548.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g05710 : 1547.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; aconitase 3 (ACO3); FUNCTIONS IN: aconitate hydratase activity, copper ion binding, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 1 (TAIR:AT4G35830.1); Has 20552 Blast hits to 20369 proteins in 2575 species: Archae - 558; Bacteria - 10777; Metazoa - 503; Fungi - 660; Plants - 232; Viruses - 0; Other Eukaryotes - 7822 (source: NCBI BLink). & (reliability: 3094.0) & (original description: no original description) 0.863940457644675 72 PSME_00028160-RA (at2g23360 : 259.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description) 0.8631933943706914 59 PSME_00013038-RA (at3g18060 : 851.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (reliability: 1702.0) & (original description: no original description) 0.8628442117422424 61 PSME_00012153-RA (at4g16760 : 903.0) Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.; acyl-CoA oxidase 1 (ACX1); CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 5 (TAIR:AT2G35690.1). & (o64894|acox2_cucma : 291.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1806.0) & (original description: no original description) 0.8622358518084016 62 PSME_00023023-RA (q42908|pmgi_mescr : 962.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Mesembryanthemum crystallinum (Common ice plant) & (at1g09780 : 928.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink). & (reliability: 1856.0) & (original description: no original description) 0.8621142592313701 63 PSME_00005563-RA (at2g27600 : 333.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description) 0.8620041457962523 64 PSME_00034583-RA (at4g02400 : 169.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description) 0.8607134155345473 67 PSME_00016827-RA (at2g05170 : 1212.0) Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.; vacuolar protein sorting 11 (VPS11); FUNCTIONS IN: transporter activity, binding, zinc ion binding; INVOLVED IN: vacuole organization; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528), Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 716 Blast hits to 615 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 269; Plants - 42; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (reliability: 2424.0) & (original description: no original description) 0.8605705515424382 69 PSME_00018506-RA (at5g18525 : 1150.0) protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Tyrosine-protein kinase, active site (InterPro:IPR008266), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 6236 Blast hits to 5560 proteins in 402 species: Archae - 7; Bacteria - 1002; Metazoa - 1933; Fungi - 1317; Plants - 774; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (reliability: 2300.0) & (original description: no original description) 0.8595181957226792 70 PSME_00010222-RA (at2g22125 : 1663.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 3326.0) & (original description: no original description) 0.8589849026182257 82 PSME_00014907-RA (at1g72710 : 598.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (reliability: 1196.0) & (original description: no original description) 0.8583766112827876 89 PSME_00016010-RA (at4g35630 : 303.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52877|serc_spiol : 275.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 606.0) & (original description: no original description) 0.8576946272074355 73 PSME_00052848-RA (at1g13980 : 1854.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 3708.0) & (original description: no original description) 0.8575184001175441 74 PSME_00020520-RA (at3g05030 : 231.0) member of Sodium proton exchanger family; sodium hydrogen exchanger 2 (NHX2); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: cation transport, sodium ion transport, regulation of pH, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 1 (TAIR:AT5G27150.1); Has 5239 Blast hits to 5232 proteins in 1555 species: Archae - 25; Bacteria - 3481; Metazoa - 811; Fungi - 131; Plants - 434; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description) 0.8523590660534227 77 PSME_00000970-RA (at1g24764 : 681.0) Member of the MAP70 protein family.; microtubule-associated proteins 70-2 (MAP70-2); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-1 (TAIR:AT1G68060.1); Has 48419 Blast hits to 29383 proteins in 2175 species: Archae - 681; Bacteria - 6937; Metazoa - 23825; Fungi - 4071; Plants - 3202; Viruses - 118; Other Eukaryotes - 9585 (source: NCBI BLink). & (reliability: 1362.0) & (original description: no original description) 0.851741264285691 92 PSME_00056337-RA (at5g64270 : 2056.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 4112.0) & (original description: no original description) 0.851468254253498 80 PSME_00034275-RA (at5g03160 : 515.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (reliability: 1030.0) & (original description: no original description) 0.8511248073901473 82 PSME_00031309-RA (q6z4g8|cobl1_orysa : 643.0) COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice) & (at5g15630 : 632.0) Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.; IRREGULAR XYLEM 6 (IRX6); INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918), COBRA-like (InterPro:IPR017391); BEST Arabidopsis thaliana protein match is: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family (TAIR:AT5G60920.1); Has 379 Blast hits to 368 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1264.0) & (original description: no original description) 0.8509602406432084 83 PSME_00000360-RA (at3g01100 : 163.0) unknown protein, has cDNAs and ESTs associated to it; hypothetical protein 1 (HYP1); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: Early-responsive to dehydration stress protein (ERD4) (TAIR:AT1G69450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description) 0.8505264753086048 92 PSME_00026337-RA (at1g74690 : 206.0) IQ-domain 31 (IQD31); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 30 (TAIR:AT1G18840.2); Has 8498 Blast hits to 6418 proteins in 674 species: Archae - 21; Bacteria - 823; Metazoa - 3400; Fungi - 838; Plants - 1044; Viruses - 44; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description) 0.8493178508909712 89 PSME_00031865-RA (at3g60860 : 551.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 1102.0) & (original description: no original description) 0.8490969256934895 90 PSME_00007345-RA (at3g13772 : 994.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 1946.0) & (original description: no original description) 0.848197429862159 93 PSME_00011738-RA (at3g17970 : 348.0) Integral chloroplast outer membrane protein.; translocon at the outer membrane of chloroplasts 64-III (TOC64-III); FUNCTIONS IN: binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; LOCATED IN: integral to chloroplast outer membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 32911 Blast hits to 27744 proteins in 2680 species: Archae - 530; Bacteria - 15888; Metazoa - 4120; Fungi - 2515; Plants - 2100; Viruses - 0; Other Eukaryotes - 7758 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description) 0.8474837865815538 94 PSME_00001542-RA (at5g18200 : 142.0) encodes an adenylyltransferase; UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases; CONTAINS InterPro DOMAIN/s: Galactose-1-phosphate uridyl transferase, N-terminal (InterPro:IPR005849), Histidine triad-like motif (InterPro:IPR011146), Galactose-1-phosphate uridyl transferase, class I (InterPro:IPR001937), Histidine triad motif (InterPro:IPR011151); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.8474057983725215 95 PSME_00033129-RA (at3g08510 : 455.0) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (reliability: 910.0) & (original description: no original description) 0.8465904790898472 96 PSME_00011993-RA (at4g31180 : 683.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink). & (reliability: 1366.0) & (original description: no original description) 0.8462269804007317 97 PSME_00010289-RA (at3g27380 : 413.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 826.0) & (original description: no original description) 0.845987703684815 98 PSME_00018936-RA (at1g63000 : 514.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (reliability: 1006.0) & (original description: no original description) 0.8458621278249822 99