Sequence Description Alias PCC hrr PSME_00005897-RA (at1g66070 : 166.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (reliability: 332.0) & (original description: no original description) 0.7932457908036696 6 PSME_00037882-RA (q40680|ef1d1_orysa : 219.0) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation factor 1B-beta 1) (eEF-1B beta 1) - Oryza sativa (Rice) & (at1g30230 : 210.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.7884898437197171 71 PSME_00025419-RA (at1g55300 : 140.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.781194618903185 29 PSME_00044683-RA (at4g09340 : 166.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144), SPla/RYanodine receptor SPRY (InterPro:IPR003877); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 1270 Blast hits to 1182 proteins in 217 species: Archae - 0; Bacteria - 1; Metazoa - 551; Fungi - 310; Plants - 183; Viruses - 1; Other Eukaryotes - 224 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.7691484997945952 5 PSME_00004839-RA (at1g12840 : 208.0) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8.; DE-ETIOLATED 3 (DET3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: lignin biosynthetic process, regulation of carbohydrate biosynthetic process, unidimensional cell growth; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit C (InterPro:IPR004907); Has 563 Blast hits to 541 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (q9scb9|vatc_horvu : 113.0) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit) - Hordeum vulgare (Barley) & (reliability: 416.0) & (original description: no original description) 0.7679328725977088 74 PSME_00008196-RA (at5g24080 : 275.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17801|kpro_maize : 166.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 524.0) & (original description: no original description) 0.7612394813199647 7 PSME_00012844-RA (at5g36290 : 270.0) Uncharacterized protein family (UPF0016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description) 0.752705316454149 43 PSME_00035768-RA "(at5g23090 : 237.0) ""nuclear factor Y, subunit B13"" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)" 0.7521425141502057 18 PSME_00051825-RA (at4g31010 : 101.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description) 0.7487081309638083 11 PSME_00019162-RA (at1g77490 : 289.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (q69sv0|apx8_orysa : 288.0) Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice) & (reliability: 578.0) & (original description: no original description) 0.7437134111757197 31 PSME_00028165-RA (at1g72050 : 220.0) Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.; transcription factor IIIA (TFIIIA); FUNCTIONS IN: 5S rRNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description) 0.7363316680508039 61 PSME_00025230-RA (q9awm9|bxdc1_orysa : 281.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (at3g23620 : 259.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description) 0.7349416586245175 76 PSME_00001131-RA (at1g19340 : 302.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 604.0) & (original description: no original description) 0.7303786103025308 17 PSME_00006889-RA (at3g05530 : 267.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (o23894|prs6a_bracm : 267.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (reliability: 534.0) & (original description: no original description) 0.7297187311389044 44 PSME_00002698-RA (at4g10490 : 398.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10500.1); Has 8582 Blast hits to 8537 proteins in 997 species: Archae - 0; Bacteria - 1099; Metazoa - 117; Fungi - 945; Plants - 4980; Viruses - 0; Other Eukaryotes - 1441 (source: NCBI BLink). & (q05964|fl3h_diaca : 223.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 796.0) & (original description: no original description) 0.7279227176184604 22 PSME_00014314-RA (at5g53140 : 391.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 782.0) & (original description: no original description) 0.7264366391472976 53 PSME_00008053-RA (at1g09815 : 81.6) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description) 0.7186920411739341 25 PSME_00041151-RA no hits & (original description: no original description) 0.7174869807682267 55 PSME_00040136-RA (at3g07030 : 181.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 449 Blast hits to 441 proteins in 135 species: Archae - 3; Bacteria - 20; Metazoa - 178; Fungi - 24; Plants - 137; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description) 0.7149272728801223 86 PSME_00016934-RA (at5g08560 : 395.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description) 0.7128346952230067 30 PSME_00027296-RA (at1g02560 : 249.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). & (p56317|clpp_chlvu : 146.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 498.0) & (original description: no original description) 0.7108554428492457 98 PSME_00011983-RA (at3g18240 : 220.0) Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT4G21460.1); Has 302 Blast hits to 286 proteins in 105 species: Archae - 0; Bacteria - 67; Metazoa - 57; Fungi - 33; Plants - 60; Viruses - 2; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description) 0.7101276030422903 38 PSME_00020229-RA (at5g08415 : 104.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.710116850815601 34 PSME_00008436-RA no hits & (original description: no original description) 0.7094200540892007 77 PSME_00050206-RA (at1g34300 : 114.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 88.2) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 216.0) & (original description: no original description) 0.7046709057684084 64 PSME_00024422-RA (at1g52150 : 777.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 1554.0) & (original description: no original description) 0.7027154484412316 43 PSME_00020367-RA (at5g26110 : 317.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Kinase-associated endopeptidase 1, Bud32 (InterPro:IPR022495), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description) 0.7014061600868096 57 PSME_00009142-RA (at5g60590 : 155.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description) 0.6992106536032223 47 PSME_00033920-RA (at1g49590 : 135.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 270.0) & (original description: no original description) 0.6981504743543514 91 PSME_00023298-RA (at1g71696 : 378.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 756.0) & (original description: no original description) 0.6978481668382361 49 PSME_00009892-RA (at5g10980 : 220.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 220.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 440.0) & (original description: no original description) 0.693892842463423 69 PSME_00042189-RA (at5g10260 : 372.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (q40723|rgp2_orysa : 149.0) Ras-related protein RGP2 (GTP-binding regulatory protein RGP2) - Oryza sativa (Rice) & (reliability: 744.0) & (original description: no original description) 0.6898072159953347 71 PSME_00051129-RA (at1g65650 : 390.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 780.0) & (original description: no original description) 0.6832015677388297 62 PSME_00052948-RA (at1g74040 : 116.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description) 0.6829499723206306 63 PSME_00028437-RA (at1g50370 : 377.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: flower-specific, phytochrome-associated protein phosphatase 3 (TAIR:AT3G19980.1); Has 6872 Blast hits to 6704 proteins in 524 species: Archae - 81; Bacteria - 295; Metazoa - 2372; Fungi - 1410; Plants - 974; Viruses - 10; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 227.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: no original description) 0.6782127303448987 99 PSME_00042712-RA (at5g51940 : 184.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) 0.6762750854192151 73 PSME_00004430-RA (at1g10490 : 149.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description) 0.6743439611506392 73 PSME_00046606-RA (at1g61180 : 157.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 314.0) & (original description: no original description) 0.6725685740294185 75 PSME_00010320-RA (at4g24900 : 128.0) unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description) 0.669938104145642 77 PSME_00021169-RA (at4g26570 : 231.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description) 0.6693484037566703 79 PSME_00042145-RA (at5g11950 : 305.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description) 0.6669078794925352 83 PSME_00028927-RA (at1g31440 : 103.0) SH3 domain-containing protein; FUNCTIONS IN: clathrin binding; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G34660.1); Has 3264 Blast hits to 2883 proteins in 317 species: Archae - 14; Bacteria - 271; Metazoa - 1747; Fungi - 174; Plants - 243; Viruses - 12; Other Eukaryotes - 803 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.6657775078251313 84 PSME_00046440-RA (at5g09250 : 111.0) putative transcriptional co-activator (KIWI) mRNA, complete; KIWI; FUNCTIONS IN: protein binding, transcription coactivator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT5G09240.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.6601811944993994 100 PSME_00022213-RA (at3g05520 : 86.7) Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description) 0.6536718490349537 96 PSME_00044281-RA (at5g51980 : 174.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: zinc finger WD40 repeat protein 1 (TAIR:AT4G25440.1); Has 29113 Blast hits to 15916 proteins in 570 species: Archae - 36; Bacteria - 4384; Metazoa - 10765; Fungi - 6879; Plants - 3369; Viruses - 0; Other Eukaryotes - 3680 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description) 0.652175279925813 97